XLOC_039001 (gene) - C. hemisphaerica

Overview
NameXLOC_039001
Unique NameXLOC_039001
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:746709..750104+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039001 ID=XLOC_039001|Name=XLOC_039001|organism=Clytia hemisphaerica|type=gene|length=3396bp|location=Sequence derived from alignment at scaffold_362:746709..750104+ (Clytia hemisphaerica)
tttGCGGTTACGGCATTTTGGTGTGAGTTTTTCAGGCGACATGATTGCAT
CAATCTTATTAGCTGTACCCGGTTTCTTTTTTATATGGATGTTAATCACT
TATGTGGAACATTTGATCAGTTTGAGAAAATATCCGAAAGGACCATTCCC
TTTACCGCTGGTTGGTAATCTTTTGATGTTGAGCAAAACACCGTATTTGG
ATTTCATTGAAATTGGAAAGCGATATGGAGATGTTTTTAGTTTGAGTCTA
GGTAAGTGTGTTTGCTTTCTCCTAGTACAGTGGAGTCTCACTAACTCAAG
ATAAATTTTTTCGAGCTAGAAGGAAATCTCGAGTAATGGAAATTGGTTTG
TAAGGCATCTTTGCCTGATGAGTTAAGGAGACAATTGAGTTATAAATAAG
TTCGAGTTGcaatttaaaattaattaacaaattaaaattttctcattcag
agaaaatttaccaagttcaattatttttgaacCCACTCAATTCATAAAGC
ATCATTAtttaaaagtatcaatttttgagaaaaatgaatattCTGTTCTA
AACTCTCGAGAAACATGGCCCCGAAAAGACAGAAAGAAATTTGTCTGGAA
AATACCAAAATTGGGTGGTCTCTGTGTCAAAATGTACCTAAAATTTTTAG
TACATaggtactaaaataccactttTCTAAAATGGGGTGGTGGTATGCAA
GAAAttctcgaaaatccttttaataCACATATTTGTCCAAGTTGTCCTAA
TACAACGAATTATTTAATTCtacatttttatccaacatgCTGCGAACAAT
ATTgcttctttttcagaaaaaattttttctgtctgtttgttaaatgaaaa
ttgaagtttGGCCAAAAGCTTTTGTACAAGAGAAGAtaatataccgggtg
acccacgaaaaagttcaaaagtgttttttacacttttcgaaaagtgaatt
ttgactttaaaagctcataagtagagaacaagttggtcaaatttgaaaag
tgatggctcaaattttaagttaggatatctactttctaaatatcaaaact
ccaagcactttaggacatttgttcggcctcaagacgtcgggaaacgtctg
aactttttcgtgggtcacccggtacataTAATCTCACTGTAAGTAATCTC
AATTTTGTAGGAATGACTCGTATAGTCATTATCAACTCCTACACCAATAT
CAAAGAAGCATTGATCACGCGAGGAACTGATTTTGCCGGACGTCCGACAG
ATAGTATCGTCAACCGTATTCCATCCAATAATTTCACCAGTGTCATATCC
TTTGATTACtccaaatcttttgttttcgtTCGGAAACTTGCCTTCAAGAG
TCTTCACTTGTATGGAGCTGGTATGAAGAATATTGAAGACATTGTGATTG
AAGAAGTCGAAAAGATGTGCTCCATACTCACCAAAGAAGCTGGAAAGCCA
GTCCCAATCAGACATCATCTAGGTTGGTTTCAATTTATTTTCCCTTTTAC
Ttctattttgaaagaaagtcgtttgtctttttcttaaagattttattttt
acataagttttCCTGTTTCAtttcagacacatatttcatattgtctgcct
attgttatattatgctgatataaacaaagaaatgtttttcttttcctctt
tttgaccaatcttgccccacatccgtgtcaattcaatttgaaaaagcttg
taaattaaaactgatgagtaagcaaacgatatcactcttatttaaaaaca
aagcctTTAAGCATATTTTTCGCTTTTGGAATAGGATAAGGTGGTTTTGG
TCAGGGGTTCAATATTTATAACGGATAGTTTCCTTGTACctcaaatgaaa
agaaagattcttagtttatatatattttttagcgCATCGCAAATCCGCCA
CTGCACGGACTGTAAAGCTGGGCGATGCATCCAACATTATTGTTGCATGA
AATGTGCAAGTCATAATATTgcaactttttaataaaaatggtggaaatca
tgttggatgaagtttgagcaccaaacatttcatccaacatttttatgaaa
ttaacGTCACCTTCATGTTGCTTCcaatgtttgacgtttttgtgcAAATG
ACTTTTCGTGCAACTTCGATTTTTTCCACGTGACTTTCATCCAACATTTC
GTCTAACAAAGAATTTGgaatgttggatcaaatgtcGGATGCATTTGCGC
CGCCTTAAGGTAGGAAGCTTCATTATTTTACCTGCTCAACATCATAGAAA
TACTTCTTTTCATTCCCAGGAAATTCTCTGGTCAACACCATATGTCATCT
TTGCTTCAGTAAGAAATACGATTCACACGATCCTGAATTTCAACAGATTC
TGGAATCCATGAGAATGATTATCCAGGGTCTAGCACCTGGTTAAGCCATC
TCCATATTCCCCTGGCTAAAATACCTACCACATAccaagaaattcaaaga
attacTCAAAGGTTCTGAAATACGCGATTCAATCACTCGTAAATTCTTTG
AAGAACACATCCAAACTTTCAATCCAGAGAAATTACGAGATTTGACAGAT
AATTTGTTGTACTTGTCACAAAACAAGGAGATGTGGCAGGATGCTGGTTT
TGAAAAAGTCACACAACTTCAATTGGAATCGATCATCAATTCAATCTTTG
TTGCTGGCATTGAAACCTCTTTATCCACTCTCCGCTGGATGTTGATCTAT
TTATTTCACaatccaaaaattcaaaacaagatCTACAATGAATTATACAC
AAACCTTGGACCTAAGCATCAAATCACTACTGAAGATATGAGATCATTAC
CCTACACTCAAGCTGTTCTCCATGAAACCAACCGGTATGCGTCTACGCTA
CCTCTTAGCATACCACACAAGACGACTGTCGATACTTCAGTTGCCGGCTT
CTCAGTACCCAAAGGAACACAAGTCCTTTTCAACTTATACAGCATGCATC
ACGACCCAACCCATTGGGATGAACCAGAGAAGTTTAAACCAGAACGTTGG
CTCAATCCCGATGGTAAtctcaagaaagaaaaagttagCCATTATCTACC
CTTCTCGACAGGTACGCGGGTATGCCTTGGAGAGAGGTTAGCTAAGATGC
AAATGTTTTTGATTGTCACCAAATTGTTTTTAACGTTCGAAGTGGAACTT
GCTCCTGGAGAAAAGGTGCCAGATATGAAAGAAGGCAACATTGGGATTAC
CCTGGAACCGAGAGATGACTTCAAAGTGATTCTCAAACCCCGAAAACATT
GAAACCGAACCCTAGCCTGAACCATAATGTCCAAAAAACGacataaaaaa
tatattagaaaaCAGTTATGTAATACTATTAGGTGGAATTCAGATTTTTT
ACTGCGGCAAATGATTCGGAGATCTTCTTCACAAGTTGAATCGTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062211TCONS_00062211Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062211-proteinTCONS_00062211-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:746709..750104 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.79	0.4	1.06	0.4	5.81	4.14	0.99	1.7	0.75	1.23	1.16	0.77	0.41	0.73	0.63	0.89	1.92	1.01	0.23	0.53	8.55	9.86	2.28	3.47	7.48	9.2	2.4	1.75	5.08	4.47