XLOC_038999 (gene) - C. hemisphaerica

Overview
NameXLOC_038999
Unique NameXLOC_038999
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:729376..732322+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038999 ID=XLOC_038999|Name=XLOC_038999|organism=Clytia hemisphaerica|type=gene|length=2947bp|location=Sequence derived from alignment at scaffold_362:729376..732322+ (Clytia hemisphaerica)
TTAGAATctttagaaaattgaaaataaaagaaataataaatgttttcaag tgaaaaatatatcaaagaTCAACGTGAGAAAAGTGGTAGACGTAATCGGT TTGATTATTTACAATCTTTGGTCACTGAATTTCAAGATACTGATAATGAA GGTGAGAGTTGGATACAGGGGGATTTGTCTGCCTGATTTCTAATAGTTGA ATGtaacaatgaaaatattataaagGTCTGGACGAGGTGTTAAATGTGCC TGTTTTGTACTCGGAGATaacaacaaaaaaacgtaaattttatgtTTCTA TATTAGTTTACGTAACCTTTTGGATACACTGAAATTAGAACTTGTGATTT GACGAATCTTACAGCAGTTATTCGTATCATTCATGATTAGGAAACCTTTG GCATTCATGATTAGGAAACCTTTGGCATTCAACTGTTTATTTGCAATATC GCTTTTAACGGAGTAACTTAATTTCGAAATTTCTGTGGctgttatttttt cttttggatGATAACCTTTAAGCTTTATGTAATGTTTGATGAAAAGTTGG TGAtggaaaaaacaatttgaaaatttaagacACAAGGAGTTATGATTGTC ATGTATAATCTCCTGAATTATCATAAACTTGACTCATCAAATGAAATTTT GTTCTTTTAGAATCAAAACTGCAAATACTGGCCAACCTTGGTAACTTTGC TTACGACCCCATCAACTTCAATCATCTGCGGGAACTGAATGTTGTTGATT TATTCATCGGTAAATTCTAAATTGTGTGATTTATttagtttaaaaaataa tagaaCATAATGCTGTGAAATATATTTTAGATAGAGTTTCCATCTTTTCA TTCTGAAGTGAAAGAATTCCAGATTTCATTTTGGAACAAATTTACTATAT ACTGTATTATACACTGTAACACAGGATTGTTTCTGCCCTCACATTtcatt ttaacttattttaacTCAGATTTTTTCTTACAGATATGCTAtctgaaaac aatgaaaaattcgTAGAATTTGGAATGGCTGGTTTGTGTAACCTCTGTGT TGGTTGGTAACTTATCTTGTATTCAATCATATTTGATTTATCTTATAATT TAGTTTATCTTATAAACTGGATTCTATCCACCTACAATTGGGTGTGTTAT ATCTCCCTAAGCTTGCCAAAAATGTGTCTGACATGCACTTTCAGATTTAA TAAGATGTCACGGAACTCCAGGCTCGGCCCCCTACTGTGCTATACATTTT AACTTCGTTTTCATTCTTTGTTTCAGAGTCAACAAATAGAGACCATATCA TTAAGAATGAAGGTGTAGATGCCATTATGCAATGCTTCTCAAGGTTAGCC GTAATGTTTTTTgaattgttaatttttttaccaaagatTACTTTAATCAT TTCAAAATGTCCGTAtgtaataagaatttttttttctccaaaaactCTCC AATCTAGAATTATTGTAATCATTCAAATCTTCACTCTTTCTTATAGCACT AATGAAGAAATAGTGTTGAATGCCATGACAACACTCATATATTTAGTCAC ACCAGCCACCAGGAAAGGTAAAATAGCCATCACCTCCTCTACTAAATCTC AGATGAGATGATAAGACGTGTAACTTCAGTCCAAGGTTATtcaaaggctc ctctttcaatTGTTGTCCACCAGAAGAGAGGGGATGATCTCACTCTTTCT CCTACAGTGTCTATTGTTGACCTTTCTCTGTAGTTTCCAAGCACAAAACT ATTAAGTCATTAGTAAGGTCTTACTGACCCTTATAACCCCTGAACTCAAC TAATTATATCCGCAATCCTTGTTTAGAGTTGTATTAAagttgtattcatg atatgcaccgctgcaatgtcttctgacatcacggaaccaattcatgatat gcaccactgcaatgacttcacgaaattatgcaatttttctgtatttgttc cacccaatacgtctttttttctattgtttaagtgacgtatcgggttgaac tttttgaaaattctcagaagactctccagtggtgcatatcatgaatagct cattggttgtaagtgacgtaaaatcagtcaatacgtcacactatcaacca atcagctattgggtggaatggaagacattgcaatggtgcatatcatgaat actctAATGGTAGTACTTCGCAATGTACAATTAGGGTAACTCAGATCATA GATTTTGTTTTGCTgcatattatattattttgaacCCTTAATTTGACTCA TTGTCAccattgaaatttgatttttaatcaaatttacTTCATCTGTTTTA AGACATCATAACAGAAGAAATTGTGGATTGCATGAAACAATTGAAGACCT CAACAAATCCAAGATTGAAAAATCTTGCTACCATTTTCCTACAGGTATAG CCTTTTTACCAAACCATTTATTATACAATTTGAAAGTGCCAAACCACTAA AACGGCCTAGAGATGACTAAAAGAGCTACTTCACAGAGCTATGATTTTTT ATGTAAGAAAATTATGGAGAATCTGAACACAGATTTGAAATCATTAAGtt ttaaatattctaaaaaGTATGATGTCATTATTTTTGAACCAGTAGGTTCA ATCATCTTCAATTTAGACTTTATAATGATCTTAAATCTATTAGATAATTC TCCTCgagaatatctttttaacggtACATAACTTTCTAACATGGCGTAGA GGAGTGCTGAGGTATTGTTAAAATTAAAGTGTCAACATATTTCAgacttt atttttgaattcactttattttatcaaaattcctTCTGACTTCAGGATAA TTGCCATGGTTGATGAAGATAACTCAGGAGGTTTAATTTTTCAGCTGATA CCCGTCAAATCAACCTATCTAATCAACTCTAACTGACTACTTTATAAAGT TTGCGGCTTATGAACAGGAGTTAAAAGGGATACCATGAGCAGAAGAN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062205TCONS_00062205Clytia hemisphaericatranscript
TCONS_00062206TCONS_00062206Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062205-proteinTCONS_00062205-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:729376..732322 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ARMC7armadillo repeat-containing protein 7 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.57 23.67 9.79 9.39 26.52 17.04 16.94 16.69 12.22 12.56 14.68 10.17 7.75 5.99 7.76 7.53 13.8 13.64 3.17 6.92 11.61 12.59 23.02 19.81 15.29 15.81 11.62 11.91 13.28 15.51