XLOC_038990 (gene) - C. hemisphaerica

Overview
NameXLOC_038990
Unique NameXLOC_038990
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:457161..464840+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038990 ID=XLOC_038990|Name=XLOC_038990|organism=Clytia hemisphaerica|type=gene|length=7680bp|location=Sequence derived from alignment at scaffold_362:457161..464840+ (Clytia hemisphaerica)
TGAAAACCGTTTATGAATCCTCAGGAAGTTAGGGGATAAGGCATTACGTC ATGTTTGTTTGGGTCACTAGCCTACGGAtattttgaaatcgaaagtgaaa ctaTTTTGATAAGgatagaatttcgaaaaaatttctttagtttttgAGAA CGAAGCTAGAAcactggagatatattgaactGACTGAAAGAACAAGACTA AGATTTGATGGCCTTTTCAAACGAAATTCAcagttttaaaaagaattcaC TTTGCACTACAGATACAGTGTTGACAAAACTTGATGGAACCAAGGTAAGT GCCACTATTGTATTTATTATCTTATATATGtatcagtgtagacctaaagc tctaaaccagcatctaataacatgaaaaccagaatatgattcttcaatgg gaaccaaaactataaagtgcacttacaaacaaNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNctaccatttttagcgcggtccgaggat tgagccgagaacgctccgcaaACTCCTgtgcgggtgaaaaacttcaatct gtcaatcattttctcaagcgaagagtactcGAAGCGATTccagctttacg atagtgccgcgggtcatcaatggatagtattcaattatcattatcccttt attttcattcctagaacttttggaaaaaaaaagggaaaatagaaaagttg tattttttactgctctattcacatactaaatttgaaagatcttctaccgt gagtggtcctaaatccgacagccctgcctaaatccgatggggtctttcaa agatacaaactaaaataaaaacaaacctttcgctgtgacacaatgaagat accaaagtgtcaactaaactgagagatttgatacactgaaccaattgaac caaataacaacaattgcttcttatacaaaacataattttttattacaaaa ttgttaaacgttttaaacacgagcaatggattcagaataatagagggaat tatttttacaactcacattttattgatcacattaattgacatcttgacat tatagtcattttgttagatgttttgtttccaaagttcttgcaatagttta ttgctcaacttggagaggaaattttggtaaacatagattttttttcatag cagttatttgaggggttggatttaggcagggatgtcggatttaggaccac tcacggtatgtggcgtttttttgcaaacttcaaaaaactgatttttgtcc tgcctttgcgggactttggcttaagtgcttgagtgcagcatagggtacaa agtccaaacatgcatttcccgtaatttttgtgtgaagagttaggtctaca ctgtatATATCCATCGCTGTCCGGGAagccccgaaatcggtccacggagc gaGTTAGaacaatttttgccggcttttgacgatactttgaggaactttga agaactttgaaggacccacACCGGTGGAAGGACTCACATCCCTCCTAACC AGTGGGCACCAgtcggacccccccccctccggaaCCCCGGCGCCCGGCCG GGCTGGGATAGCGAATTCCGCCTCTTGTGTTTTCTTAATCACTAACACCA GGTTGCCTTGGCCCTAGTTCAAGCTCGTTTAACACTAATTCCAGGTCAGC ATCAATTTATGTTCTTGAAGCCCTTTCCAATTAACTCTTACTTAACACAA GGAGTAATTTCTAGTATAATTTCTAGCATTTCTAACTTTTAGTGATTTAT ttacatatatttttatttatttaatttatcttacctttttattttgcatg aagCTAATGAAACTTCCTATTTTGTTGCAAGTTTATCACCGCCAATTTAC ATTTTCAGCTTGCGGATTCAACTTAATTTCAACTCCTAGTTTTCAATACA TGCCTTCACATTTTGGTATTCTCAGCACCAagaattttatattataaatt atttttgaataaagaaccaaacattttatttcaactcattttcatttata ttttttttgttagaTGTTTTTATATGTAGGGAGAACGAACATGTATGTTT TGTTactacttaaatatatagatagatagatagatgtCACGCAACTATca ttgacgtcaaaccaaatgtttcatttttccatgaactttgaacccttcta actttttttctatgtatgctaaaagAAAGCCtttgatcttagctttccag cggtatataaccattgagtttaaagcccgaagggctagagttcaatctct aacctttctcaggcaagaaaaagtgaagccttaaaaaatgcgtcgcattt ttgacgacagattgaatctggaaatggaggaaattGTTGTaaaaggctga aactttgtatgtttatcagaaaaagggtgaggaattaaaaaatcacaatc gctaattttagttctttGATTATCATGGCATGGgaagcatgggaatgtcc caaaaaaaagtttatttttctgccgaaatggattttcttttcatttgggg tttctcctttcagaaaaacttattctttacttataactttttgttcctcc atttccagagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNgactcatttcaaccttttccaagctac ttttcttcaaaaacaaaataaaacaatgcaatgtcttcttttttcaaaaa aagatatatctttcattattttgataaatatactaaatatttggcATAAT TGCACTTGAGTCCCCCGGGGGAATGATTTTTTCAGGTCTAAATTAATGAT cttatttgtgaaaaaattggaaagaaatatgataatgcttttaaagaacg gacAATACTTGGGTATGGACTATGAGATATAATAGTGTACCTTCCATTCT TTAGAATAACCCTTttctataatgcttttaaagaacggacAATACTTGGG TATGGACTATAAGATATAatagtgtatcttccgttctttagaataacccc tttgtataatgcttttaaagaacggacAATACTTGGGTATGGACTATAAG ATATAatagtgtatcttccgttctttagaatagCCCTTttctataatgct tttaaagaacggatAATACTTGGGTATGGACTATAAGATATAatagtgta tcttccgttctttagaataacccctttgtatagtgcttttaaagaacgga cAATACTTGGGTATGGACTATAAGATATAATAGTGCatcttccgttcttt agaataaccccttgctataatgcttttaaagaacggacAATAGTTGGGTA TGAACTATAAGATATAATAGTGTATTCTTCGTTCTTTAAAATAACCTCTt tgtataatgcttttaaagaacggacAATACTTGGGTATGGACTATCAGAT ATAATAATATATCTcccgttctttagaataaccccttgctataatctttt taaagaacgGACAATTCTTGGGTATGGACTATAAGATATAATAGTGTATT CTTCGTTCTTTAAAATAACCTCTttgtataatgcttttaaagaacggacA ATACTTGGGTATGGACTATAAGATATAATAGTGTATTCTTCGTTCTTTAA AATAACCTCTTTGTCGAACGCATTTAAAGCACCGACTATCCCTGGGTATG GACTATAAGATATAATAGTGCatcttccgttctttagaataaccccttgc tataatgcttttaaagaacgggcaATAATTGGTAATGGGCTTTAAATTAT AATAGTGTATCTTTGGTACGGACTTTTTAAATAAACtaacaaaaggaaaa ttattgttcagttacttgcagttcagtcccgccaaATACTTGACGGGACT GTATTTCAGTCCCGATAATTTAATGGCGGGGNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCGTATTATTTATAATTAG CCCCGTTCTTCCCTGTTTTCAAAGTTCAAGCCGCCAATCCTTCTTTTAAA GGGACTAAACtattaaaaggaaaattattgttcagttactatatatatat acttgcagttcagtcccgccaattactatcttgcagttcagtcccgccaa gtactatatatatacttgcagtttagtCCCGCCAAATACTTGGCGGGACT GTATTTCAGTCCCGATGATTTAATGGCGGGACTGAATTTCAGCCCTGACA AATACTTAAAAGCCTTATAATTAGTGCGTATTATTTATAATTAGCCCCGT TCTTCCCTGTTTTCAAAGTTCAAGCCGCCAATCCTTCTTTTAAAGGGACT AAACTATTAAAAGGTAAattatatatacttgcagttcagtcccgccaaat actatatatatatacttgcagttcagtcccgccaagtactatatatatac ttgcagtttagtcccgccaattactatatatatacttgcagttcagtccc gccatttttgttcttttttaacgaaaattcttaaaaattttgtCGGGATT GAATTACAATCCCGTGTCGGGACTCAACTACAATTATGCCAAATATttta ctaatatttttatataataatattctaacaccatcaaagaattatccctc caaatttcaggtgtCTAGCTGCACTATAgtaaaagagatatgcaaaatta aagaagcatgacttggaaatattttttttttcttttttgacacatttttt gaatttttccaagctattttcctaaccttttttttgacatttttagtcaa atttttgacactaaaatttgaatatctttacaaccacttatcctctggag gcctatgacccctcattttctttctttttcaaagctacaagataggatag gttttaaaaaaacaataaaaatttgaaacattttctggagttgctagctg ggacccccaggggccgtccgcGTTGGTACCaaagaaagtcattttttttg acgaattttcgaaatgttttattactgtcaactgctctgaCTTGAcactg gtctgtattttcacttactgtaaaattgaaagcagaaagagaaatcgtgt agtttttaatacgccgttccttaactcaaatcaaatgactttggaggttc ggtgaaatggtggctgaattgccgttccatgttttgtcagatagtccaaa GTTAGAGCAGTCAGTTGACGGTTGCTTCTTATCTATAGGCTATTTTCATT CTCAGGTTTTTATTTATTGTAAATAGATATGTTAAAACGAAAAGAAACCT TATCTTAGCtacatttgatattttagtCGCGTTTAATAGCCGTAGTAGGG TATATCTTTTACAGTAAGACATAACATCATTTCTTTTGCGgaggcaaaaa tcagttttttgaataaGTTTACAAATAAACACCACATCGAAGATCTTTCA AGTTCAGTATGAAAATTATTGctacagcccccccccccccccccgggttg gaTTTTGTCTAGcctctgaattttttttccagtgccagtggtggttggaa attccgatgaaaatTGATGATGTACTTTCGCGAAATGCTTAATACATTAT AGTCAAATCGACTGATTTTGGAGTCTGAATACAATTCAATGTGTTTCAAT ATAAGATTGTTTTTCCAAGTAGGGCCTTTTACCGATCCCTTTATTCCTGA TTAATAGTAAACGTAAACGTTCTAttatcttttactttttttccatttca tagGTTAAAGAAAAGAGTGGAGAGTCAATTCTTACTGATggaggtgattt ttttgttgttgatgaCTCTCCCGATGAAAATTTACGCCATGTTATTGATG GACTATTTATCAGCTCGCAAGATGCCTCAGCCAATCTTCAAGAATTAAAG GAGAACAAAATCACACATATCTTAAACGTAGCCATAGGATGTCAAAACCA TTTTAAGGAGGTAAATCTAATGTTTTTTATTCAGACCTTTagctttgttt ttgaaaaaattttcagatatatatggtgaagagaTCTGACCTGAAATTGT GAAAGTTAGCTATATATAGGAAACATTTAATTATTATTTAACAGTTATGC GGTCTTTTACACACTATTAAAATCCTTTTTgttgaattgaaaaatataaa tctgaaataaaaatgaaatacacTTTGAGCTTTGGGAGTTAGTATTTAAA TCGAAAGTTTCAATGCACAGTTCCTTTTTTCTTTGTAGCATTTCACATAC AAGAAGTTGGAAATATTGGATATACCTGAGTATGACATAAGCAACCATTT TGAAGAATGCGTTGGTTTTATACATGAAGCAATCACAAATGGTGGCCAAG TTTTATGCCATTGGTAAGAGATTCATAATACAAAAAAAACTAGTTATTTG GAAAACACCAGATCTTTGAATTTTTAGGGGGGTAATTTTGCGAATCCCTT CCTGCATTATAGAGATCTGGTAGGACCCCTCCcaaatgatgaaaaatatg GCCGAAATATCGTCCCTGTAGCAGAAACAGCCGAATATtccctaggctgc tggcatccactaacggattcgcaCTACTTACTCTCTTGGGTAAGAGGTCT ACATTGGGTCATTCAGACTAAAATAAAGGCAGCCGATCGAAAATAAAATG GAGAAAAATCCTTATTGGAATCTGATGACAACTATTATTCCTGTAAATGA AAAGGGGTATTGAGGTAGAGTTATTTGTCGCACGTTACCGagtaaaatat attttcgaaGGCACCTGAATGATCAGGAAATATATAGAAAAACTTTAGGA GAAAATTATGTCATCGAATTGAAAAATAGACCAGTTTTCCATATTTTATG TATCTTtctgtttttcctttttctttctctctcAACACCATaagtttcaa ttcttttttattaGCAATGCTGGTATATCTCGGTCATCAACCATCATAGC TGTATACTTGATGCAAAAGCATGAAATGTCTTTACAAGATGCTTTAACAG CAATTCGAAAGAACCGACCAGCAGCGCGACCAAATGATGGGTTCATGTTA TCATTGAAACAGTATGAAGAAACACTGAAGAAATGCTGATAAATAAGCAA AATGAGTTTATGTAAGTTCTGATTTTCGAGGTAGTATTTTCTGGAAAACT TTTGTAGTTAATGAGCAattgaaaaacattgaaaagtaGACCTtgaaaaa cacccctgtctcagtccctcggtggaaccttttccctcagtggggatgaa aatttctatcgaaattccaatggggatagaaaatctattgtttccagcta aaaaattccagtggggatggttttgaagtg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062186TCONS_00062186Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062186-proteinTCONS_00062186-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:457161..464840 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DUSP19dual specificity protein phosphatase 19 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.9 31.18 28.4 23.21 22.63 14.88 18.99 19.33 14.64 18.05 15.1 10.72 13.45 9.15 12.05 11.58 24.55 21.32 16.25 21.21 18.31 18.9 22.46 21.3 13.8 14.89 24.06 18.32 21.97 24.22