XLOC_038844 (gene) - C. hemisphaerica

Overview
NameXLOC_038844
Unique NameXLOC_038844
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:1769136..1776064+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038844 ID=XLOC_038844|Name=XLOC_038844|organism=Clytia hemisphaerica|type=gene|length=6929bp|location=Sequence derived from alignment at scaffold_361:1769136..1776064+ (Clytia hemisphaerica)
ATTTTCTGGAACTGGAACGGAAGGTTTTCAAGGAAATCATTTCATCGTGT GACCAAGGAATCTAAATCTTGGTATGCGTGACCGAGTATTTataaacaaa tatggtagaGCTGAAATTTCGAGAATCGTGTGGGAATATTCAAATATGGA GAATCAGCAGTTTCTTTATAGatgaaattccattgaaaataacTTAAAAG AGCTATATGCATGAATGAGATCTCAAAGCCATAAATCCCTGCATAGGGAA AAGAGGAAAAGctatatttctttttgtttgctTGGTGTATTCGTTGCAGT ATTTATAAGTGCTTATCGTGATCCAAACTTTTGGTCAGACTCAAACCTGA AGAAGATTGGAAATAATTTTGtgaacaaagttttaaaaaaattctcaaaa acccAAGAAATAAGACCAAGAAGACCtaaaaagaaagacaaaatcACTGA TAAAGAGGAAAGATTAATTATGACCTATAAATCTATCAAAGAATTTGCAA CTGCAAACAAAAAACGTGAAGGTGGAGGTTTCATGGTGCGCAGACCCATT GGAGATAAAATAGACAATGTAGATCCATTTCTGATGCTTGATCATTTGGG ACCAACTGTTTATGGGCCAGGTGAAGCAATAGGAGCTCCAGATCATCCTC ACAGAGGTTTTGAGACGGTTACTTATGTTATTGATGGTAAGTAAGGTTAA AGTTTCTATTTTTGTTGATTTAACTGGCGGAACCTTTGATTTAGGGAAAA CGTAAGATACAAACCTCCGAAATGTGATCCTTATCTCTGATCccgtcttt ctcttttctgactgtctgagattctaagacttagtttctcatttctgact gagttttcatacctgtcaatcatttgtccatcaatttcgatcagtctaat tttcgcaccaaGTGgaattcgaaccaccaccaaagaaagaccttcagatt cggaagccagcgctctatcccttgagccatcgccgcacagcaaaatcacg caattcataacattttatacatactaaactggcaaaatacgggggtaatg ttattataatatgggtaaaaatttaaaatgtcggaatgagcaatagccga tcacattttggaggtttgTATCTTATGTTTTCCTTGATTTAGGCCCATTT TCAGCTTGGGAAATACCTTCTGTTTCCATTTCAAGAAATGATGTGTGAAT CATCAATGATTATGATGCAAGCAATCGACAAAAGAAACCCAGTCTAAGTG GGAAAAAATTTGCCGAATGATTCGGTGATGAATGTCAATAAGTGACGATC CTCAAGGCGTACTGGAACCGAGTGATATCCATTTCATGCATCAGTGACAG AACGGATGGTTGATGGTGGTATGGCACGAGCTTGTTGGAACGGTGGAACT GTGTGATGGGTTTCACGCTGACATTGTCGATTAAGAGCTTGAAAATCAAC TACTCTGGGGTGAACCATCTGGTTTTCGGACCCAGAAGGCCCGGTGGCAC CAAGATGTTGGTGTGTTTGGTGGAACCTTTTCTATGACGCCAAGGGAAAC ATCTGCATCAAGTTGCTTTTTTATCGTATCACGCCAATTAATAGGTACTT GGGCTGGGTGTGTACAGCTGAGGGAGTGGCGTCAGAACCGAAGGACCTTT CATCATCGGTAAAGGCTGGTGACTACATTGGTTGAAGGTTGATGGCGCGA AACGTTCGAGGAGCCATTGTTTCATCTGATCACTGTTCTCCTCTGTTGGC TCAAAGGGGAGCTCGGAGGGGCGAGGTGGAGGCGCAGTGGCAAGGCAAAC ATTCACATGCATTGTTGGGTTCAGCTTCTGCAAGAATTTCCTGGTCGGTG GAGGATGTGATAGATGCTGCCGCTCCGATAGAAGGAAAGTCAGTTGGAAT TATTTTCATATTCTCCATACCTTGGTAGAAGAAATCAATTGAGTCTGTAA CATAAATCATTTCTGGAGCTTCAATGTAATGTCCTTGTTTATCATGATCA CAAAGACGGCTGAAAAATGCACCCAATATATTGATCCCCTCACTGTTGGC TGAAAAATGCACCCAATATATTGATCACTGTTGGCTGCAAACATTTTCTT CTTGGCGGGAACTATAAGCGCCTTTTATCAAACCCAGATTTTCGAAATGC TTTGACCATTAAAGACGATTGGGCTCCAGTGTCTGTGATAACTTTAACTT TACTGTATTTTACTGGTAAGCTAAGTTCTTTATAGTCGGATTGATTAATG TAAAGTTTTAAGTTGATTGAAGGTTGACTTTTCGAGTCCTTGATCATCCA GCCGTAAGAGCTGTCGAAAATGTGATGAAGTAACGGTTAGATATGGGGTT TCCGAGAGGTGGCATTTGGTGGATTGGAGGATTTATTGCTGAAACTGGTA GATAAGCCACTAACAACATCGAATAAGGCACTGTTGTTGTGCTTGTTTTT GTTAGAGTTCTTATCTCTCCAACACTCAATAAATAAGTCAAATTCTCTCA GTTTCCCATaacgcattttgaatttttgaattacTTTGTCGCAGTTCTTA CATTTCGATTTTAACTGGAACTTTTTATTGAGGTCAGATTTGATTGGTGG TTTCTGATGGACAGTTGAAGTGTTAGTAGCATCATGTTGGCCAGTGTAGG ATGACATTGCACGGACTGTCATCTCCTTGTTTTCAATGAGCGAAATTCAT TTAGAGTTAGTTTGTCAAGTGTTGAGAACCCAAGAatgttttttctaatt tcctCATCCCATATACCGGAAATAATAACGTACTTTACAATGTCATCAGT ATAATCAACATTTCGGTTGCAGTCTTCTGATGGCAAACGCGCACACTTGG GCTTTACCCTTGACTTGAGCGGCGAAAGACCGAATAGGTTGACCGTGGTC TTGTTTTAATGATAGCACTTCGGTTTTACAAATACTAGTGGCAGTGGATA TAACTACAAGGCGACGAATAGCTGCTAGGAGTTGGTTCTCAGTACCATTA TCAATGTTGTTAATGTCCTTAAATAGGTCATTTTCAAATTCACTATCACA GCATTTCCACAGTTGTGTCGTGACCTGAGTTGCTGGAATGTCAGTTCCAC GCTTAAAAAGATTCCACTTCTTTGTGAATGTGTTCCACTCCTCGTCAGTA GTACCCCTTGTAATAGTAAGGTCTATCGGCTTTTGTTTGTCGGAGGGTGG AGTGGCAGGAGTGGAATGCGCCAGAGCAAGGAGGTTCAGATGTGCTGCGG CCGCGATAGCATCATTCATGGTATGCAgaggggttctaggtccccccaga aaatttagccccccccctaaaaattaGGTACCCCCTGACATAAAACCTCT CAGCCCCCAGTAGAATGACCTAAGGTAAGAAGGATCAACACagggggggg gtgaagcagttagtacaagacatcatgccggttagtaccgtagtggtgtg ccatatgaattggataaaatcacttagtactcagatgtactaactgcaaa aaagggtggtcccctgctaaaaatttgccaaattttggtactaactGTNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAGTTCTTATC TCTCCAACACTCAATACATAAGTCAAATTCTCTCAGTTTCCCATaacgca ttttgaatttttgaattacTTTGTCGCAGTTCTTACATTTCGATTTTAAC TGGAGCATTTTATTGAGGTCAGATTTGATTGTTGGTTTCTGATGGACAGC TGAAGTGTTAGTAGCATCATGTTGGCCATCATTGCACGGACTGCCATCTC CTTGTTTTCAATGAGCGAAATCGTTTCATTTAGAGTTAGTTTGTCAAGTG TTGAGAACCCAAGAatgttttttctaatttcctCATCACATATACCGGAA ATAATAACGTACTTTACAATGTCATCAGTATAATCAACATTTTGGTTGCA GTCTGCTGATGGCCACTCCTTGGCAAACGCGCACACTTGGGCTTTACCCT TGACTTGGGCGGCGAAAGACCGAATAGGTTGACCGTGGTCTTGTTTTAAT GATAGCACTTCGGTTTTACGAATACTAGTGGCAGTGGATATAACTGCAAG GCAACGAATAGCTGCTAGGAGTTGGTTCTCAGTTACGTTTTCAATGTTGT TAATGTCCTTAAAAAATAGGTCATTTTCAAGTTCACTATCACAGCATTTC CACAGTTGTGTCGTGACCTGAGTTGCTGGAATGTCAGTTCCACGCTTAAA AAGATTCCACTTCTTTCTGAATGTGTTCCACTCCTCGTCAGTAGTACCCC TTGTAATAGTAGGTCTATCGGCTTTTGTTTGTCGGAGGGTGGAGTGGCAG GAGTGGAATGCGCCAGAGCATGGAGGTTCAGCTGCGCTGCGGCCGCGATA GCATCATTGTCATCAGTTTGATATTCACAGATTGGACGGTTGATCACAGG TGTTTTTCTTCTCCAATAAGTTCAAACATGAGCAAGTATTGCGTTCATTA GACCTTTTATTAGTCAATAAATATTTGaactaaaataacaaaataagaaa tataTGAGATACTCATACAAAATTTAAAGGGGCTGTACAAGTTAATACCT TTTTTTATTCAGGatgccatgttgaataattaaaaactccagcattaaaG CAATATACATTAATTCATAATTGTTTAAAACAATGTGTGTAAAATTCCAT TTCATCAGCTGAGAAATGACTTTcttcttttagaatttttgaatgttttc aaaattctaaaaacttatTAAGAACATATTTTCAAACCCTTTATAATTCG ACTTTTTCAGGTGGGATTCATCACAAAGATAGTGCAGGTAATGAAGGCAA CCTTGGTCCTGGATGGGTGCAGTGGATGACAGCAGGGAGTGGGGTGGTGC ACAGCGAGATGCCCACTGATGAATTATTACGCACCGGTGGGCGTATGGAA GGCTTCCAGTTATGGGTGAACCTaccaaagaaattcaaaatgagTCCACC TCGATATCAAGATACTCCACCTGAGAAAATTCCAATCGTCACATCGCCTG GTAATCAGTTCGACATTCATAactttctttgaaataaaaaggttCCCTCC CAATTGACTTCTTTTAAAACCTTGGTCTTATCTATAACCGACATCCTTAA GGGGGACAAATGGCGCTACATCTTGAATATTTAAGAGGTACcccttttta aaaagatttcaatTAAAGAATTTGTTTGGCCACTATACTATTGAGAAAAC TGCCTCCAGGGTAATTAAATCCTCCAGCGtcacgtccccgtcggtcgtca aggcCCCCGGAAATCCCGCATGTAATATGAATGTGAGTCCAGTTAGGTCT GTTTCTCATTTCTTACTATTGTCAAATActcatcaaaatttcaacatctt tttTAGACGGTGGTACATCTGTGAAAGTGATTGCTGGAGAATGTTTGGGA ACCAAAGCAGCAATCGAGACAAAAATCCCAATCATGTTTTTGGACATCAA AATAAATCGTGGAAGTTCATTTGATGTTTCCATTCCGGAAAATACCAACT cgtttgtttatatttggaGAGGGAATGGGTTTATTGGTTCAGATAAGAAA CCAGTCACTATGGGACAGGTAAGGCTAAGACTTTTAACCAAATATTTCAT CCATTTTTTGATGACTGATATATTTATCAGCTACTAACGCTTTGTTGATT CTTTTTCGACTTTTGAGAAATATATTTTGTCTGACCTTTTATGCGCCATC ACTCTTAAATTTCTTCTAACTCTTTTTTGCACTTTATTAAAGGATTTTTT GGAACTGACAGATTGATACTTGGTTATGTATTATCtttgtaaaatttttc tttactagGTTGCTTCATTGTCGAAAGAAGGAGATGTGTTCCAACTAAAT GCTTCTGAAGATAGCGCTCTCCACGCTTTCGTCATTGCTGGCCAACCTAT TGAGAAGCCGATCGCTAGGTACGGTCCCTTTGTGATGAACACATATGAAG AAATCCAGCAAGCGTTTGATGATTACCGAAACGGTCGACTTGGAAAGATC GATGGTGCAGAAGAAAGATATGCAAAAACTGAACAAGctaaacagcaaaa taaacaatcGGGAAATTGGAATAAACATTAGAGAATttgaatttagattt taatgatATGTTATTAATAACAAACTTCGGGGTACACATATTTCTAGTGA AACAATCGAGATGGTGAAACAAATGCCAAAAAGGCGACCTTGCTCTAAAC TCGTTGGTTTAAAATACTGCGGCTCAATACTTCCCTGCATTTGATTTTCG aactcaaattattattttaagaatAGTCTCGTCTCTGACTCGTACATGTC AATGCCTAGGCTGCTTGCATTCACTAaaggattcgtgctccttatatact acctggggttttgtagaggtctgcgattcagactagtcaATGCCTGGACT TTGAAAATGTTACaatatttttgttgttgtttttttttacttttttgtcg TGAATGATGTGAATTTCAATCACTATGGTATCTTCTTCGAATTTAGCGTC TTATTAGAAAAGGTCCAGTCGATCCTCTTTGTATAACGATGATAGCATTG TACCCAGATTTGTTCTGTTTTAGTTAGCACAAAATTTGATATCATATACA CCTCCTATAAATCGTCTTTGTTGGTCTTTGTTGGTTTTATTTgcgaaata attttttaaatatcgatgtagtttttttaactcgtcTTTTCAAAGGATTG TAAAATAGTCGGAATTTTATTTATACAACCTATTATTTCcaatttgaaca tttttaaaaaatgcaatCCTTTTTGTTGtattcaattttaaatatttttc gtatTTAACCGTAAAATATTAAGGATCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061962TCONS_00061962Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061962-proteinTCONS_00061962-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1769136..1776064 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PIRpirin Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.9 4.24 5.5 5.82 43.7 32.95 49.01 48.88 39.6 44.03 60.68 34.33 34.71 23.97 21.4 28.25 24.41 23.26 28.46 62.61 19.2 23.9 24.57 24.86 28.25 30.86 31.93 61.56 30.52 30.23