XLOC_038621 (gene) - C. hemisphaerica

Overview
NameXLOC_038621
Unique NameXLOC_038621
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_36:30664..38475+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038621 ID=XLOC_038621|Name=XLOC_038621|organism=Clytia hemisphaerica|type=gene|length=7812bp|location=Sequence derived from alignment at scaffold_36:30664..38475+ (Clytia hemisphaerica)
TCCACATTCAGGACAGAAATTTAGTTGGAAACAATATACTTAGTTTTCTC AAAGACAAGATCAATTAGATACTTAGACATCATCTTTGGATATGCTTGTT TTTGCTGAAGTTTTGtatataatttaattttttctcacTAGAGTGTATCA TGTTTCAAAAAGATTGACcaataaatatataaataagatttttatgtttt gtatgAAGAATCCCTCCTTGTTGAAGGGATTCAGTCATCACCATTTCTTC AGCTACAGAAGATACACATTTGATCCCACGCAGCCCTTCCACTGGTAGAA AGtaagcaatttttttatttttgtagtaCTGTATGCTATCTTTTGTCCTA CCTATGATCCTATACAACAGGGTTTCTATCTTCTTATTCCATAGTACCAA ATAGTACTATCATAAAGTgatgttttgtttatttatcttatgtcaggggg ggtcagggtccagCTCGTAGAAAAATAAGcagtctttttttatttttgta gtatgcaatttttggacctacctggaggtcctataaattaacctgtgttc gttcgtttgtccgttcgtccatccgttcgtttgtctgttaccaacttttc tcaggattgaatcataggaatcttttgatttttggtacaaaggtgaaaaa tggtggtggccataatgtgacggagcctgattttaagcaaatttcagcca aaaaaatggctaaaaaagggtttttaagaCTTGTGAAAAATTGGTAATCA TTAATAATAGCGCTTCGTCGTGCAAACGTCATGGTAGtacttctctcatt tgaccgaaattcaatcccacaatccttttcgtcttaattataaagtcgtg aaagttattacttttcctttgtaattgagtgtaatttgcgtgcaagcata ataaacgcaaagggtgatgggattgaatttcagtcaaacataaaaaatca atgtctatttttagattcgcgacggtatgctattggtaaaagatggctga agcagattttcacaaaaaaattttttcggctcaaaaaacgaATCTTCATC TATAAGAATTGCCTTTTTTTAGCATATTAtcgatgttcttagccatatta ttatttttattagtttttttaagatgaaaatgtcacaaTGGAGGGCAATG GTTTGAGTGTTCTAGAAATATTATTATttctttggctgaaaaacgacaCA GTGATTTGTTgaatttatcattttcacaTTTTCGTCATGAATTTCAAAGT TATACTCTATTTTCTTACAATGTTTattctgttagaaaaaataaacattt agtTTTCATGGCATTTGACAGTAAGGATATGGTCATAAACATTTATCCAG GGGGGACAAATTGAAATTTGTAGGAGTAAATCATTAGAACAGTCATACAA CCTGCACACCCGTCTACCTTTGTTTTTCTGAAACGGAAGAGTACAGGCTT TTTTTACTATAAGAatgtgtaaatccatttcatcatggatatttttaact tttttgggaaaatcgtcctaaaatattcttaacatattcttaaggttgat ttttagattttaccaGTCATAGTCTCAAAATCATAGAAAAGTATTGTAAA AACATGTGTATGCATAAAAAACAGAATAAGTACAATGTATTTTAAAAACA GCTTTGTGTAAAAGTACAAAGtaaatgaaatagaaaattatAAAAGCAGA aatatattcataaaaaaatagaaaattttcatGATGGGAATATTATTTTC ACGATAATTTTCATCgtgaacattcttataaagcgTATTCTTGTATAAAA AAAGCGTATACTGTTCAATCAAGTAAACATAACAACATATCCAAACTATA ACGGAAAAATAACACTTTAAAACCAAACAAGGCTCATGTTTCAAAAAGAA CGTTTTTAAAATGTAAGGCAAATGGACAAGTTCCCATAGCAATATTCATG TATCCGATTTCTGTTTTAATTAGGATAGTGTGCCCTTTCATGTTTTGTCT TGTGACAAGCGTCCTAACGTCTAGAAGGTCTACTTTAGTAGTCTTGATGC ACGCGAGCTTTCCTTTTTGTGAAAGACACTGTACGTGAGCAGACGTGTAA CTATTTTAGTttacatctttttttttaagtttacttttttttatctctct AAAAAGCACACATTAAAGGTCTGTTTCCTTTATTCAGATTGGAATTTCTC AAACATTTTTTGGCAGGCTTTTAAGATTGCGCTTTTAGAGAAAGAGGGCT TTTTACTGTGTTttgatgattattttttaaactaCAAATGAAGTTAGTTT GCAAGTCAGGATTTATTTTTCCAAAACCAAtttaatacagttgacgctgc cctaattcgattttcaatggaattcgattttcatcaaataagggagcgta ttgaATGGTAAATAAAGCGTCGTTTGTGAAAGTTTCTtcttgacggtgac tttcaatattatcgaataatgaagCTTATTGAATAATAcaatgtcgaatt agagagcgtcaactgttacatattcaatattcgacgttaaaaaatagttt gttttCCACCGCTTCGTTTTTTTAATATTCATTTCAAAACTTACCACTAA CTTATATATCATTCTTGTTTCAGAGCTCAACTCTGGACAAACGGAACATT CATCAATCCTGAACCGCCAGCTTCACCATCCTATTACACTCCAAACACAA TGACAGTCCTGGATAACGAGGGTGGGGCGCACCACCCTCAAGCTAATGGC GtcgaaaatttcccacccaTAGAGAAACTGTCTACAAAACGTATGAGAAG GAAGCAAAGTAAATGGACGTTGATCATcacatttttatcttttattttta tcattattttaatCACGGTTGCTTATTTGGTTTCCAAAGGATTGTTTGTG CATGAAGATGCTGAAAAGGTaaatacgtttttttattagaaactGAAAGC CTTTATTTGGACTGAGCCTCGATGTGTTTATTGTTGACAGTAttaagctt aaaaaaatgttcttatcgggcgtttttgaaatttattcgCTTAAATTACT TTGAGTTAAAGAATGGTTTGGAgccttttaaatgtttttaaaattttttt cacctttcttagtttgttcttaatattttggccatcgaagtctcGTGTTT TTATATACATATCATTTTAGTGGgcatttaatttggcggatgaaagatat ttttagtccaaaacacTATTAAATgagaaaaacctgtttttaggcctaaa ataGCACGCATTTGGGGAACGAATACAATAATCTAAATTTGGCGGTGTCA AATTAAatgttcccgccaaaatttcgtTCTTTATAAGGTAATTTCTATTT TCGATTGATTTCGTAGGTACCCATCGTTAAGAGCTGTCAAGATGACATGA CTTGTCGTATAGAAATCGTCGAAACATTACCTAAAGTCTTATCCTATCCT TCCGGTTCACCTATGCACGCGAGCACACCAGACGTGTGGAAGAAACTAAC GAAAGTCGCGCGTGAAAGGATTGATATCTTATCGTTTTATTGGACGCTGA AAAACTTCACTTACGATGAGGCAGTTGTAGGAGCGGAGATATTGGAAGGA TTAAAAGGAGCTGCAAGGAGAGGTTTGTTGTGTCTTACTGTATTAAATGT aatacacgtctttttataagaacatgcaaaaattttggaagcttttggat gttcttaactttttgagttttaagcctaaaagtgttcttattctcgccat tttttgagcatttttgtcctttttcttaagaaattcaGTGTTTTAGactc cgcaaagccttaaaatgttcttaacatattggCCATCGAatctttatgtt cttatatagtttgttcttatgaaataacGTGTATGCTTTGAGTTTGCACA TTTTTTTACTACTATGTGTAATCATTTTTTTGCGTCTCTAATTTTGAAAG TTGCTTTTTATCCGCATACACAACAACAAAAATTGtttgagtgcaacgac tgcctcgttcTGAAActattaccaaggtgattaaatctCTTGAGTCCtta aaaatgttacttttataaatagagtTAACTTCTTAGAAATCCCTCTTAAA ATCAATTCCTCTTGGAATTAATTATTATAAcaattgtttgaaaacgaggt aaaacgtagctcgtgacgtaatttatgaaaaggtctattgaaataCTATA ATCATTTCTCTAGGCATCAAAGTCAACATTGTGCAAAACGCGCCAACCAA ACAATTCCCAAACCTGGACACATTTGAATTAGCCAAAGAGGAGAATGTAG AAGTTCGTTCAATGAAACCAGAAACCTTAGGTGGAGGAGTTCTTCACACC AAAGTTTGGGTTGTGGACAAGAGACATATGTATGTTGGAAGTGCAAACTT TGACTGGCGCTCTCTTACTGAGGTGAATACGATATCTTAGTATCTTGCTA AcacaacaaaaacttttttccttgGTTCTGGTTAATTTCATGGtgaaaag ctgaaatttttcaacaagtTGTAGCTTTTCACTCAAAGTTTATCCGAAAT GTCAGGGTGAATTTATTGTTAATTTCCAAACGGCTGACTACAGGCTAACA TGATAAACGACCAATTCAGCCAAATGAGATAATAAGCAAAAAACAACGGA AAGGACTAATTGTAGTTTGTACAAACTGATATTAGTCCGTAACGATTATC GTATTATCCTATAACACACATATTACTATATTACACGGACGATGAACGAC TCTAGTCTAGATTGACGACATCTCTTTACCGATTCTTCTAGGTCAAAGAG TTGGGTGCTGCACTTTACAATTGTACATGCGCGGGTGAAGActtgttcaa aatttttgacgtcaacTGGTTACTTGCACAAAAAGACTCACAAATCCCGT CACCGTGGCCTGAACAGTACCAAACTACTATCAATAAAGGTGGGTGAATT tgtatttcaagctaaaaatgggctcttccagaaaatgtccgtacacgGGG GTGAAGGATATATTGTCACCGGGGTAGcgaatcatcaaaatttgccctGT CAGGGgaggtaaatttgctctgtccgggggttgTCCGGGGtttcaactga tgcttgtctagggggtaaaacccgttgtATCTTCcacccccccatattca atttttttctggaaaagcccaatgttaCACTTTATATTGTGCTGTTAATG TGAAAAagattgtaaattaaaattgatgagtaagcaaacgatatcactct tatttagaaacaaaaacctttaaatttcTATAACTGGATTGAAATTGCGC TCACAGTGATTCTTCAAGTTATAATATATTAATGTCTATGATTTTATTCT TTATAtatttgtcaactttttttGCTGGTATAAATTTCTATAACTGGATT GAAATTGCGCTCCCAGTGATTCTTCAAGTTATAATTATATTAATGTCTAT GATTTTATTCTTTATAtatttgtcaactttttttGCTGGTTTAAATTTCT ATAACTGGATTGAAATTGCGCTCCCAGTGATTCTTCAAGTTATAATTATA TTAATGTCTATGATTTTATTCTTTATATATTTGTCAACTTTTTGCTGGTT CTAATACAAAAAGGAGTCAAAATTGAGGAATCCCCACTGAGTATTTTATG GTAATATCATCGTCTTATAGATCACCCACAAAACATTAAACTGGTGGATG CACCGCCCTTGGATTACTATTGGTCCACGTCACCGCCCTCGTTTTGTGCG CCTAAACGAACGTCTGATATTGACGCCATCATCGACTTGATCTCAAGGGC AGAGAAGTTTGTTTATATCGCAGTTATGGATTATTATGCAGCTTTTGTTT ATCAGAATAAAAGGTGAGATGTGATGCGAAGACCTTTTTCTCTTTGGTAC CCTTAGAGTTGTTTGTTAAAATGTCTACTCTCGGGTAGGCTGTACGCATC CCTTCTGATATATTTTGATATAgaggatgcgtatcgtgtataaaattccc gtctttgtgtttttgatttttagaaacttaatgattagcttgattagtaa gttttataCGAGAGATCTTTTCATTTGATTCGAGCTAAAAATTTGAATGC TTAATACAATCATGagcttttcaagaaaattgaatcAAGTTACCCaaaat ttggggtaactctcggacgggaattttatacacgactTTAAAACTCTCGG ATGCTAGTCTGGATTGAACGAGGAACTGGGAATAACATTGTCTTGgttga aaaaaagaattgattTGTTTTGGATATTTGAAAACAATTAATTACGTTAA GTGTgcttattttggcaaaaactaattttagcgaattttagtgaaatttg gAAATGGTAAACAACATTTTCAACATGGTAAACAATTTAACCCACTTTGA CTATCTGGTCTTGGCGGAAACTTATTCTAGCAAGGCAAAATGTTTCGCTA AAGTCACCAAAATTATTTCCTTCAATTCCTCCTCCTTCACCTGTTATTGT ATTTATTTAGATTCTGGCCCACCATAGACGATGCTCTTCGAAGTGCATCT TTCGATCGAGGAATCGAGGTCCGACTATTGACCAGTAAATGGCCTCACAC CAATGCACAGCAGACAGCTTTCATCAAATCGCTGAACGAATTTGGTAAAA TGCCTATGCCACACACTAGCGGAAGTATTACTGTGGTAAGTGGTATTCAA ATCAAGGACAAAACTAAGTACATTATGGACAACCAAGGTGTACTTGATTA TCCCTAGATTTTTAAGagtaatgaaaaaaattaactatGGACTATTTAGC TAAACTGGTCCGCATTTTTTTGTGACACACTTTAGTCACGTAAACACGAA GCCAAGAGGTGCCTACTCTGGTACTAAAACTGCAAAGTCCAATGGAAAAC GAAAGATACCATTGCTTTGCGGTGGATCAAGTAACATCATATAGTACATA CTTTAATGGGAGAATTCTATGTCTTGCTAGTTGTACTCCAGGCTcttatt ttaatttaatttaatttccttTTAGAAACAATTCGAGATGCCACCCAACG AAATTCCATTTGCACGTGTCAATCACAACAAATACATGGTGACTGATAAA GGAGGCTTCATTTCTACTTCCAACTGGTCTGGAGATTACTTCGCGACAAC TGCTGGTGTCAGCCTCATAGTAAATCAAACAGAATCACCACAAAACAAAA ACCAGGACCAGAAAATGCAAGATCAATTAAAAGACCTCTTTATGAGAGAT TGGAAATCACAATACACGAAGGGCTTATAATCTGGTCTGTGAATTACATT TTACGCAAACGTGATAACACAACGATCGTCCAAGTATGCAACTGTACttt aaactcgaacccagtcccttagctCGCTTTTGATGATTCACGAAAGGATT GTACCActaacctttatatatccctggaccaagtttctcaatcccagcta agcaaaatctttgatcggagttttttcgaaattggtaccctaatgggcgg cactactcaatagcggtgaaaatgcatcgagagcgctagatctacttttc ctcaaatacttttgatgatgtagcgtcGTTAGACGTTAacttttaacatt gcaatggcttcttctcgggtaccaattcaaaaaaactccgatcaaagatg gcgaatatagcttggtccagggataaataaaggtcagtggattgTACCAA TGtcaatcaataaaatcaaaaagttgcgcaagtggctctgggtatgAGAA TGACCTGGATGAATGAACTTGGATTTTCAAATTTGCTtgagtttttattt tatgattacTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061553TCONS_00061553Clytia hemisphaericatranscript
TCONS_00061554TCONS_00061554Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061553-proteinTCONS_00061553-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:30664..38475 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PLD3PREDICTED: phospholipase D3 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.17 6.41 8.2 8.06 49.64 38.02 34.88 36.79 32.98 34.62 39.84 27.41 40.2 37.14 80.82 116.84 50.45 47.1 65.74 44.28 34.02 37.31 31.48 32.5 29.99 31.44 10.51 8.59 25.33 21.94