XLOC_038466 (gene) - C. hemisphaerica

Overview
NameXLOC_038466
Unique NameXLOC_038466
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_355:390271..400178-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038466 ID=XLOC_038466|Name=XLOC_038466|organism=Clytia hemisphaerica|type=gene|length=9908bp|location=Sequence derived from alignment at scaffold_355:390271..400178- (Clytia hemisphaerica)
TTAGGTAAAAAAATTTGATGTCGGATATATCCGACATTGGCAAGTAGAGT
GAAAATTTGCATGTCGGATATATACGACATCGGCACGGAAAGGGTTAAAA
GAACAAATTGCTTTTCCCAGATTTTTTCCGCATCTCCGCACCGGAAAATC
AGCGGAAAATTTGATACGGGCGGGTGACGCGAATAGAATAATTTTGCGAT
GACCGCCTCTGATGATGACAGATGTTTGGCAGCCTAGACTAAGGCGGCAA
TGTAAAATATGTTCTGTTCGCGTCGCCCGACCGACTCACCTTCAAAACAT
AAATCCCGAGTCGGACAAGTCGGAAAAATGTCAGAAAAAGTTTTTGATAG
CTAAGCACTTCTTTGAATCATCATTCGCTAAGAGTTTTTGTTACTTAACC
CACATTGAGTCACGTTTGAGTTTTTTCATGTACCCTTATTGAAATTTTCA
AGTCGAAATTCGGCGACGCGGTAGGGCCAACACCCCCGAGAGCCGAAAAT
AAGGTCAGCTTTTAAGGTTCACACATGCGTTGCGCACATTGAATTTGGCA
AATCAAAGATGGCAACAAGAGATTTTGTTGATTGCCAACTTGATTCTTCG
GGATTTATTAGATTTTAAAAACCCGACAAAATTTACTACCGACCGACCGA
CCGACTGGATTTGAAGTTGTTTTATGACACGAACAGAACATATTTTAGAT
AGTCGCCTAATGTTAATTTTTCTTTCAGAAAAAAGACTATAATTTCTTTA
CCTTTATTCCTGCAGCTTCCCAACATCCAAGCTCTCAAACATCACAAGCC
GAATGAAATTACTTTCTATTTCCCGTAGAAATTATGCGATGAAAAATCCG
GGGGTCGAAGAATGAAGACTTTTTATTTCCGAACAAGTTATCTTTGCTTA
TATATACCAGACTTCCGCGCTCGATAGGATCGGAAGGTGATAGAAATTGA
CCGTCAGTTGAACATTTTTTTTAATCGGCGCGGCACATATAAAATAAAGA
CCGGAATGAAATTTATTGCATAAATCAAAATAATTATGCATGATTATGCA
GGTAAACAGTAATTTCGGCGGGAACCAATACACCATACACGCGAAATTTT
TTTTCACTGGCCTTGAGGTCCTGGATGGAAGAAAAAGAATGTAAAGGGAA
AGACACAAGACAAAAGGGGAAACAATGAAAAGGTCGAAACGGTCGAAGCG
GTCCAAACATAACGAAGCTTTTAAACGACTATTGGTTGACGCTGGTTCAG
GTATCTTTTCTTCAATCTTTCTTCAAGATTACTAATATTTAGGCTGCTGG
ATATTTTGTCAAATCAAAATAAATCTCCTTCTTACCTTAGTGGGCATCCA
CAGGAAGGAATAAAAAAGAGATTTCTTTACTCCTTCACGCTCTCGCCCAG
CCTCAGCCTCTCGCTTTAAGACTCTTTAGAATTTCATGGAGCTTGCGCCA
CAACACAGTTTAAATTTTAAACCACAAGAGGTTATTTAACACGAGGAGTC
TGTAAGCCAGACATACAGACAGACGGACAAATTTTACAACAACAATAATA
TACTGTAGGGCTTTTTCTGTACAACCCTTTAACTTTTGATCTAGTTGGTC
TTTTTGAATGAAATTTGGCACACATGATCCTTGTCACGTAAGGTAGCTTT
TGACAAAAATTTATTTCGATGACGTCACTCATCATGCCGGAAGTGAGCAA
AAATCGCAAGTTTCCTTTGTTCTTCCAAAAGGCTATTTTAACTAATCAGG
GCTTTAGAAAAAAGTTCTATGAGTTTAAAAGGCTTATTTTATCCTAAATA
TTCAATAAATTACGGTTTGAACGATATAGTTTTATTTTTACAAGAGCTAT
TAACATTAATTTACCCACCGAACAGAAACAGCCCCCCTAGTACGAATTAG
TACGGGTTAATGGTATTTATTTTCGCGTGTTACTAATTTTCGCGAATCAC
GAATTTTTTTTGAGAAAAGGGACCATTTAAAAAGTACGTACGCTGAGAGG
GGGGAGGGGGGGTACTCCCAAAAGCGTACGAGGGGGGTCGTTGAGGAGAA
GTACGTACGCTCGTAATTTTTCCTAAACTGTCTTTTTTGAGAGAAAAACG
CAATATTTTCACATCAAAAAACTGTTTTTGCGATTGTTATTTTTCATTTC
TCCTTTGGTATTTTTGTTTATCTTATAGAATATTTTAATTTCTTGAGACT
TTGTTATAAATACGATTGGATACCTACATATTCTACTGTTACAAGAGTTT
CAAGTTTCGACTTTGGTTAGAGGGGGGTGTACTAAAAAGCGTACGTACAC
TGAAGGGGGGGTACACATAAAGCGTACGGAAGCGTACAAGGGGGGAGGGG
GAGTCAAAAATTAGCCATTTTCGAGGGTACGTACTTTTTGAATGGTCCCA
AACGTGTTTCCCGGGTATTAAATTTCACGATTTTGTATCTTCGAAAAATT
TAAACGGTATTAAACGGTATGTAATCCAGTTCCATGACTAAAATTCTTTG
TCCTATTTTGAAAGATGAAAGTTCCACTGATGAAACACCAGAAGAACCAC
CCCCACCACCACCTGCCCCTATCATTGAAACTCAATCTGGGAAACGACTT
AGAATCGACAGAGAATCCCACGAACTCTTACAACGACTAAGAGAAGCTGT
CATTGTTGTAACAGGTGAGGAGGAAGAGGAAAATCACATGATTTATTTAA
GTTAAAGTAATTATTCTCAAGATTAATCTCACTACACAGTTTCATTATTG
AAAGAATATCTTTACATTCTCTATCTTGAAGAACGTCCAAAAATGTTCAT
TACCATAATAATTCTTCCTCTCAGATGAATCAGAATCAGATCCAGTTGAT
TTTGACGAAGTTGAGCTTAACCATGAGCCAGACGGTCCAGTGGAGTTAAA
TCATGAGCCATACGGTCAAGTGGAGTTAAATCATCAGCCAGACAGTCCAG
TGGAGTTAAATCATCAGCCAGACGGTCAAGTGGAGTTAAATCATCAGCCA
GACGGTCCAGTGGAGTTAAATCATCAGCCAGACGGTCTAGTAAATGAAAA
CCAAAATCCCATCGGTAATGCTATATTCATAACACTAAACGTCTTTGTAA
TTGAGCTTGACAGATACACATTTTGAACTGAAAGAAAAAAGAATTAAACG
GAGTGAATACATTTGAATTCCGTACCCATATGTGCCCTTTAGAATCCTGG
GGGAAGGGGGGGGCTGAAACCATGATCTGGCATAGGTATCAGTAGAGCTA
ATCAACGTTTCATGTACTATTAATTTGTTTCAGTTAACGAAGTATTCACT
TTTGACGAGATACCGATGATGTTCAAAACAATGAAAGATGCATCCATGTT
TGTTGACGACTTTCAAATTCAAAATAATTCAAAATTCTCGACTTTTAAAA
CTAACTACAAGCCTGAAAACGATGAAACAGGTAGCCATCATTTTATTATC
TTTTGTTATGCCTTAAGAAAGTAGATGGGGCTCCAGGAGGGGGATCTTTC
GTCAAATAACGGCATATTGGTAAAATGATAATCTAAGGAAAGTTTTGAAG
AATCTTTAATTTTTTTAGCCACTGTCGATCTCAACAACCACAATGTACGA
ACAGATCATGTACGAAGATATCAAACGTCAAAATTCCATAAATCAAATTC
CTTTCACTGGATACCCTTTCATTGTTATCGGAAAAAAACAATTTGAATGC
ACACATGGTAAAGACCGAAATGTCAAACAAAAAAGGAAAAGGAAGCAGGA
AAAGTTACAACAGGTATTAAATCATTATACACCTAACCTTTTAAAAAAAC
AGACAAAAGATTATATAAATAAAACCCATAAACACTGAAGTCTCATGAGA
TTTGTGCATTGTGAGAAAGGCAATAATTAAATTTTTCTTCAAAGAAAATC
AAAAGCCTACGGTGTTAAGTGTGGCAGGACTTTTAATATCAATATTTTTC
AATTTCGTTTTTTTAGAAAGAGAATGAGTTGAACTATGGCAAAAGCAAAT
TTCTCCCTCAAGACACCAAGAAAGTTAATTGCCCAGCAAAAATAACGATG
CAAAATTTTATTTTCTTCCCAGATTACAAGGTTAAAATTATTCTTTTATG
TAGGATTTTTTAAATCACTCTCTTTATTTAAAGGATTGTTCAAAGTGGAA
GAGCAAATTTGAAAGCTCGACTCGTTCTAAGATATAAAGATATAATCATT
TGAATTTTAGAAGAAAAGGTTTGAATTTAGGAAAAACGAAGAGAAAGAGT
TGATATTTTTTATAAGTAACATCAACACAAAGTTATTTTATTTTTCCTAT
TGGGATAATAAAACTATTGATAAATTACTGTCTAGAAGAAAAAGGAAAGG
AGTAAATGAGGGCTGTGACATATCTACTTTCTAACCACAACAATTTGTTA
TACAGGTAAACACAAATAGGAACACAAATACGATATATTATAAGCGCCTC
GTGAACAACAAGCTAAATGCCGATTGGGCCACAAATCCAGGTGCAATCAA
AATGGAGCAGCAAACAATCGTCCACATCGCCGATAACCATTCAGGGCATT
TGTTAAACAAAGTGAGTGAAAAAAAAAACTTAAATAGACTACACCTATCA
AGATAAAAACATCAAGAGAGGTAGTTAGGCACGATTTAGCCGTGCTAATC
AATATCATCCTATTCAAATCAATAGGTGAAGCAATGCAAAAATTCAGACT
TTTGACGTAAATTGTCACGGGTAAATTCATTCCTAAACCGTTATTTTTAT
CTTGATAGGTATATTGAGTGAAAAGGGTATTCTAGGATTATTACCTGTCA
TATAGTTGATTTGGATTTTAAAATAAGGGTTTCACTCCAATTTAGTTTGC
TGGCCTTTCACAACAAATTGACAAAAGACTGGTGAGGAAGATTCACGAAT
CGGTTGGTCATGGTGTACGCGATGTTCGAGAAATGCAGCGAGCGCTCAGG
GCCTATTGTGATCTCCGACCTGTATCGAGGTTCAATTCCACCGAGCAGCT
CAAGTCGTCGATTTTATCCCGAGCCAAGAGACATCCGAAATCATATGAAC
ATTGCTGCGAATAAGTATAGGCGATCCAAAATCGATCAGGAAAACTTGGA
AATGATGATAAACGAGTGGCGAAGATCAAATTTGGATGATAAATTTCATT
TTCGGCGGTATCATTCTGGCACTGCTGAGGAGGCTGAAAGACAACAAATT
TATGATGAGAATGGGAATTGTATTAGTGAAGAAAATTTATAATCATAATG
TCCATTTGAAGTCTTATAGAATCTTAGGAATGTTTAGCATATGAATTGGT
TTTTTTTTACTTTGAAGACCAGTTTTCCTGTTTCAATTTGGGTTGACATT
TGACTTAAGTCTTCCGTAACTATTAGGTATTTGTTTTTGCTCAGTTAAAA
ATAATAATTTTCTTACATGTGATCAACGATGGTTCTTCAAGACTGCTCTT
TGTCCACCAAACTAACTTCCAAAGACGTATGCTAAAACGATATGGAAATA
AAATTTGTTTACTTGATGCTACGTACAAAACTACTAAGTACTCGCTCCCT
TTGTTCTTTGTGGCTGTTAAAACCAACGTAGACTATCAAGTGGTAGCAAG
TTTTGTTACTCAAGATGAGACAACTGCTGCAATTACAGAGGCCTTATCTA
TTATTAAATCATGGAATCCTTTTTCTGATTGGGATTGGAACCCTACATGC
TTTATGGTGGATAATTGTGAAGAAGAAATTCAATCAATCCAGAAGCTGTT
TCCAAGTAAGAAAGATTTACTTTTTGATTTATTTTTACTTTTTGATTCCC
TTTCTCTCAAAATGTACAATATTTATTTTAGATACCATACAAAACTTTGT
TATATCTTTCTAATATAATGCATTTTATAACAATAGGCTGCCGAGTGCTT
TTATGTGACTTCCATCGAGAGCAGGCCTGGGGTCGTTGGCTGTCTGCTAC
AAAGAATGGAATGAGACAACACAAAAAGAGAGCTTTAGAATTTCTTCGAG
CCATTGCCAGATCCGAAAGTAATGTCGAATTTGAGCTAAACTTCCAACTT
GTGAAGGAAGATCTTATATGGAAAGAAGAAAATTTCAGAAATTGGATAGA
AAGAATATGGTTACCATGTTTATCAAGTAAGTTTATGTAAAAAGGGAATA
AGATTCTTGATTGCAAACTATTGAAAAAGTATTATGAGCACATGGTTTCA
ATAAAAATTGGCTGCAGACAGGAATTTTGTTTAAAATCTGCATTTTAAAA
TAAGGTTTATACACCGTCTTTCTTGTAGATGTGGGTGAGAGCATACAGAG
ATGGTCTCATTGAGGTCCCAGTCCACACAAATAATGGCGTGGAGCGGAAA
AATAAAGACTGCATGGATACCTCAAGCAGCATTCTGACAAAAGTTTAAGT
GGAATGGTTTCTGTACTGAAAAAAATTTTTGAAAGTTCTTTAAAAAGAAT
TAAAATATAAGCACTTACTACACCAAAAGTGCTAGTTTTAGTGTTTGGCA
CCACCCCAAACAGCAGTTACTACACTGTGTAGTAACTGTTTTCATAACTT
CTGAATACAGTACCACCACAGTAGTAAGTGTCATACTGTCTTGTAGTAAC
TGTGTCCCCCCCCCCTGCCTAAGATAATCTTTTTAGGCCAAATTATCATA
TATTGTATTTGCTTTTTAAAGAAATTTATTTCTAATTTCAGGCCTGGTCC
AGTCTACTTGCGGTACAAGGTTATTTATGGTTCAACTCAAGAATTGCCAA
GATGCAGTTGTCCGGACTGGAAACGAAATTACCTACCATGTAAACACATT
CTAGCTGTGCTGAAGTATATGGAAAATAAATCCTTAGTGCCGTTAGGGAA
AAAGCTGTTGGAATCCCTCTCTCACACTATCCAGTTAGAGCCAATACTGG
TGAGTGTAATTTTAACATTTCCTACCCTAAAAAAGATTGTGAATCAGAAA
TCGGTTGAGAGTTCAGGAACCTGAACTTGAAATTCGAACTTACCATGCAA
ATTTTTTATCAACACATAACAACCATTTTCATTAAAAGGTAGAAGATGGC
GTAACCGAAGATGACGATCCAATTGTACGATACCCAAATGCTTCAGACCT
GCTTGTACCAGATTCAACCACCCCAACAGAAGAAAGTAATGTATTACCAG
CTATAGAAGAGCAACAAACGAAACCTCTTAAATCAAATACTGGCCAAAAA
TGTCGTGAAATTATGAAGGAGATAGTGAACCTTACACATCTAATGGAACA
CAATGAAGAAGCACTATTGATTTTAAAGGGTCAGCTAATCAAATCATTGG
AAAATATGTCTACAAAAGCTCCCAGAGATTTTGGTTTGGTTCTTGACAAA
AGAGTGAAAAAACTGCCAAATAAAGTTCAGACAGTAAGTTCTTCATAAGA
TATTTCCTTGGTTCTAAAGATGATTCAGTTGCTACTCCCACAGTAGAACT
TTTTAAAACATTTGTCCATTTGTTGTTTTCCAGAAAAAGAAATGTTTGGG
TTAAATTCGGAGAGTTACATATAATATTTCTCGACTGTCATGAGTTTTCA
GGTGAATAAAACTTTTTCAAGGAAATCAATAAAATTGGGAAATTACATAT
ATTTAACTATAATTTGTTATTATTGATTTTTAGAAACAACCATTCCAAAA
TATTCCAAAGCCAAAGAAGAAAAGCAGCACTGTTAGTCGAGTAGGTGTGG
CAAGTGAGATGGATATTCCAGATATCAAAGAGGAACCCACCAAAAGGAGC
CAGAAAATACAGCTAACAACTGAGGAATGTATTCCTCTAGATGACAAAGC
AGAATATGACATTCCTCTTCCAGAACCTGGTAAAGCTGATGAAGATGAAA
ATAAAGCTGATGAAGATGAAAGTGAAGCTGATGAAGATGAAAGTTATAGA
AATTGACAGTGAAGACGAAGAAGAAAATGATGATGAAACCGTTTCAGTTC
CAGCTGTGATTGCTAAGAAATGTATCAAAATCTTTCCAAAGATTGTCCCA
AAGTTGGAGATTGAACTGAGGACACCTATAATCACAAATGGATCAGTTTC
ATTAAGTTACATAGATTTACTAGCCTTGGAACCAACAATGTCAAATGCTG
ATAAAGATGAAATAAGAATAGAAGAACCAAAGTTCCAGGTTGGTTGGTTA
TCAGATAATGTTATTGATGCCTTTCTGGAGACTGTTGTATTACACCACAA
GAATTGTTTGACAGTGTCAGCTTCCATAGCTAAGAGCATCAGTCTTGGAA
GAGCAAGAGCTTTCAGACGCATGTGGATGGGAAAATCAATGGATGATGTT
GAAACAGTTTTGGTACCATTCAATGCTAGTGGTTCCCATTGGATTTTGAT
AATTTTGAAAGTAAAGGAGCAAGAAATAATTGTTTTGGATCCAATGACAA
AAAGGTATTTGTAATTATAGTGGAATCTTCAACAAGAGACTTGGCCCCTT
TATTCTTCATGGGAGCTCTAGGCAAAATTATTTATCTTTATCTCCTGCAC
AGATTCCATCTTGAATCTTTTTTGGTCCATTGAGAGATTGGGATTTAAAG
AGATTACACTTGAAACTAGATTTTTAGTATCTATACAATTTAAGAAATAA
CAAGTAAAAATCTCATTTCCTTAAAATACAAAACTCATAAAAACTTAATT
TCAGCCTATCTTTGGACACTGCTGAGAAAAGTATGGAAATTGGGAAGAAG
ATCTTTGAGATGAAAATCCCAGTGAATCTTCAAAACAAAGAACTGAGAAT
CAATTTAAACATGCCTCACACCCTTCAAACTGACACACACAACTGTGGTG
TTTTCATATGCTACTATGGGAAATGTATTGTACAAGGTAATAAATTCACA
GAGCATGTTTTAAAATCCTGAAAGGTGGATAATTTATATAAGATTTTGTT
TCCCTAATTTGGTTCGAAATTTTTGTGACTAGTTTCTGCCTTTTTAAATC
TTTAATCAAGCAAGTATAGTGTCCATGTCTGTACAGTTTCAAAATTAAGA
TGTTTCTAGATAGTTCTAGAAGAGTACAAATTTATGTACAGTAGGATAAA
AATATCAAAATATTTTTTTCTAGATGAATCAATTAATGATGCATTTGGAG
TTGATGTGTTTAGGCAATCCATGGTTAAAGACTTAACTGGAAATTGTTTA
TTTAGCTATGACCCTTCAGTTGGAAAAAGATTATGCAAGGTATCATAATA
TATATTCTATTTTAAATTAAGGAAAATAATGAAAAGAACTGAAAAGATAG
ATAAATTTCCATGGCTTGAGGAAAATCATTTGTAAAAGGTTATTCTTCAT
TATTCCAGGTGTGTAAGAAAACTGATGATGCTGGTGATGAAAGCAGTAGA
GTCCGGTGGGTACAATGTGGAAGATGTTTTCAATGGACACATAACATGTG
CTCCTTAAAGGAAATTCTCACCGAAAGAGATGAAGAAGAATTTGTTTGTT
GAGAATCATTTTTTATACTTAAGTCCAAACGATAAAAATGATTATCGGTT
GCAATCGATAGAAAATGGATTGATTACATATTGATAACGACAGATACTGT
ATATAACAATGGATAATCGATACCTACTCACAATTTTTACAGGTTTGCTA
ATTATTGATTACTTATCGATTAAATTTATACCATAGACTACTATCAATTT
GATTGATTATAAAATGGGTATTAATTAATTTATTAATTAAATTAATCAAT
CTACAATTTTTTAAACCTTAAAAATGATCTATTAAATACCAGACGGAACT
ATTGGAACTAAAATTGGAACTATCTTCGATGTCTCCCTTCCGTTTCTCAT
TTGCTCCCCATACTAGTATGAAAGATATATCAATTTCCATTTATTATTTC
ATTTATCATTTATTATTGGGCTATTCCAGAAAATTTTTGTTACCCCCCGT
CGGAGGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061315TCONS_00061315Clytia hemisphaericatranscript
TCONS_00061314TCONS_00061314Clytia hemisphaericatranscript
TCONS_00061313TCONS_00061313Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061314-proteinTCONS_00061314-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_355supercontigscaffold_355:390271..400178 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.5	0.58	0.67	0.57	4.46	4.11	3.72	5.2	2.61	2.8	2.04	1.64	2.13	1.93	0.39	0.56	0.45	0.64	0.45	0.32	0.74	0.65	0.81	0.67	1.59	3.39	0.62	0.55	0.87	0.92