XLOC_038368 (gene) - C. hemisphaerica

Overview
NameXLOC_038368
Unique NameXLOC_038368
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:401814..408849-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038368 ID=XLOC_038368|Name=XLOC_038368|organism=Clytia hemisphaerica|type=gene|length=7036bp|location=Sequence derived from alignment at scaffold_354:401814..408849- (Clytia hemisphaerica)
GTAAAGTTTTAAATTAGTAGTCTAGATCTAGACTAACTTGAAGGGTGCTT TATACCATACATTTAGTTTTATCGTCTTCCTCTTTGCAGTCTCCAATTTA TTACATGTGTAATGAAGCATAAAAACTCATTTTCGGTATTAAACTTTTGT TAAAGCAAAATCGTAGCTCGCACAGCTATAGTCTGTGATTCTTGTAATTA TTATATTTCTTGGATTGTAGTTTTGTTTTTATTTTTTTGATGGATTGAGA GCATAGTAATGATGCCACCTGGACGACTGTATTTCATTACATTATTTCTG CTTCTGAATGGTAATATCAAAATTTCATTTTCCTTTTATAACAACTCGAT GTCACCTCTTAATGCTACGTAGCTGAGTACACTCCTTTTTTATAAGAACA ACGAGGCAAAAAGTCGCCAAAAATGAGACCAATTTAAGAACAATGCTGAG CCTGGATTTACTCAATTTCAAGCAATTAAGGGCTCAAAGTAGTAAAAATT TGATATAATGCCCAAAATACCTGTATTTTACCCCGCAAATAAGAACAGGA AAGCGACAAAAAAATAGAACAGCAAAGCCTCATTGAAAATCTACTGACTC TTATAAAAAAGACTGTATAACATAAAATTTCCTGGTACAAAAGAAACATC GTGAAGACCTGCCATAATCTATTCTATTGACAAGATTTTCAAAAACTAGC AAATATGTCTTTTAACTACTACCGTCGTTTTGGGTAAGATTTTGCTTCCC GGACCTTAGATTCCACTGCCACTTTCCAATGGAAAAGAAAAAAATCCCAG CTGGTTGGAAAATAAACTCCCGAAAGTTACCCGGATTGACTATATGCCGT GCATCTGGAAAAAGATTTTACAATTTCCAGCCAGTCCCCCTGTGGGAAAA CAGCGGAAATATCCCCAAAAGTTAGTGAAATATTATTATATATCCGGGAA GTGGGAGCTTAAACAAAACGACCGTAGCTTTCGCCAAACTTAATCCACAA AATAAATAAGTGATTCCGAAATTACGTAATAAAGAGAATCCTTTGTTTAC TTTTTTAGGATGCTTTGCCTCATCCGCCCATCCTACAAGGAAGAATGCAA CCAAAATATTGGAAAAGATGGCCGATAAGAAAGGCACAATTCGTATTGCT GGTAAAATTTGATTCCTCAATTATTACCAGTGGAAACTCCCTACCCAATA GGGAACTTATTATCAATTGAATGAAAAGTGAAGTTCAAGTTTTCGAACAG GATTGATGATTTTTGCGTTGCGGTCTATTTTTGGTGTGTGTTAAGCAGAT GAGATGGAGTTTTTATAAGATACTTTAATAATTGGTCATTTGAAGTAATA AAAATGGCTGCGTTTAGACCAGCCTGACATTTGTAATTGCCTGCAGTATT CTTTTGAATTCTATTGTTCCACGCAATTGTTCGGTTTGTCTAATGCCTAA TGATGCCAGCGTGTTGGCATTTCGTTGGCATTTGAAATGCCATTTGAGCA AAGGAATCCCCTTTTCTGGCATTTCAAATCAAACAAAGGAACCAAAAAAA AGAGAAAAAATAACATTTTTGATTTTTTAAAGCATTTGCACGTTTTTTAT TCAGTTCTTCCTATAGATTGTAAAATTTGCAAGATTTGCCATAGCCTAGC CCTACGGCAAAAATTTTCATTATTAATGACTGCAGTTTTTGAGAAATTCC ATGCTTTTCATTGTCTGATCTGTCAAAGTTGAACTTGAGGGAATCACAAG GGAATAAATGATCTGTAGTGAGATTGGGCTATTCCAGAAAAGATTTATAC CCCCTATGTTGAGGAGGTCTTTTTTTAGGAAACTTGACTTTTCTTCAATT TTTTGGACCCCTGGTGTATTCGACCTCATTTTACTGACCAACCTGGATTT TCAACCTCGTTTTACTGACCACCCTGCATTTTCACCTCAATTTACAGTCC ACCCTGGATTTTTGAATCCGAAAAACGGGAACCCCTGGGTTTTTCTTTTT CAAGACTACTCTGGACGTCACACCTCCTTGACAGGGGAAACATTATGTCT GAAATAGCAAAATAGCACATGAAGTGTTTCAGAACCTTGTTTGTTTCTCT TTAATAGGTCCATGGAATTCCGATAGCGCACTAGATCGTAATGTGGACAT GGGTGAGGATGCTTATGTGAAGAAAATCATCTCAAGTAATGAAGGAATCA ACTTCAATAAAGACATGGCTGAAGCTGGAGGTAATTGGAAAGTTCAAGTT AATTAAAGAGTATAAACTTTCACCGGTAGTTCCACGACTCTGGGAACCAC CTTCATACACAGTTTTGATGAATTCATTCAAGAAAAGCTTTTAAACCATT TTTCATTCGGAAATTTTCACTCTCATCCATTGATTCACGAAAGTTCATGC TGGCGAAAATATTTTTTGTGCTCTTATTCGTGAAAGCTTATGTCGTAAAA CCTTGCGATGTTTTAGGGTTCATCATTTTATATTTGGATACCTATCTATG ATGTCTAACTCTCCATGTCTAACAACCGCTCAGTGAGAATGATGAAGGAG CTTTAAAAACCGGGACCTTCTATCAGTGACCCGGTTTGAAAAATAAAGAA GAAAAAATGAACTTTTTATGATTTATTGACATAGTTACTTTGAAACCTCC TTCTAATTTCAGCACAGATATGTAATAGTTATCAGACAGTTGCGAGTACA ATATGAGAAATATTTTACGAGTTCCGAGATTTTTCCNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTCTTTTCGTCAATTTATATTTTTACAT GTAAAATACAAGATATATTGTACTCTTTTTAACCAATCAGATTGCAGATA TTTTTTGGATCGCCGATAAATGATATTATTCTCCACATAGATTCATTGCA CATAAAGATATTTAGTAAAACTTAAATGTAGCTTTTACCCATACTCATGA AATCATGAAACTACCTATTTCGTGTTCTTTCAATCACACAACTCGTAATA ATTATTTATACTCTATTTCTAGAAATGTTTGAGGTAAACGGCATCGATGA TTTCTACGACAAAAACGCCATGATAACGTACGAAATCAATGGCCACGAAA TTCCTGTTCATATGAAACCTCACTTGACGCCTCAAACTAAATCCCTGTTC CCAGAGTACGTCAAAGACTCACCTGGTCAAATGCAAACAGGTGGATTCGT TCGAGGATCTAAAGCAGGAGGAATGCTCCATGGATACGCTAAAAAGGTTG CTGGTGTTAAACTGCCAGCTGGACTATCACTAAATGATATGCCTGAATAT AAAATGCAGCGATTCACAGGGAAAACGCTGGAGAATTCAAATATGTGGAA ATCTTTAGAAGGTTTGAAACAAGATAAGGATAATGGAGATTTGAGATATG CTTATAAACAGAATCACGCTATTACGAATCTTTTTCAGAAGCAATTACCA GCCTTGGCTGCTTTCCAGAAACACTATAATCACCAGAGTCGATATACAAA GCCTGCATTCGGTGATCAGATCTTAAAACATCATGTACCAAGACATCACA GGCTAGGGAAACCACTATTACGGGAATTTATGAATCAGTATCCTCATGAG TCGACCAAAGCTGACGAAACGATTGAACACAAACCAGCTCTGGTGCAGGA ATTCATGAGTATGAAACCCAATGAGGAGTTCGAAAAGGAAGAAAACGAAA AAGCTAGTGGTAAATCAGAACGCAATGAATATCGGTTTGCGGCCAGAAAA ACAAACGGAGAACACCAAGAACAAATCCGTCATGAAGATTCCATTGAAAA TAAACATTTTACACAAGAGAAAAATGCACAACAAGAAAAAGCAACAAGTT TGTTCCAAAACCTTGATTCTCTTCATCAAAAACTTCAATTAGATAAACAA ATCAATGCTGCTGAACTACAAAGTAAATCTGCAAGTCAAGACCCGCATAA AGCTGAAGCCAAGACAAGGATTTTAAACCTTCTCGGTGAACTAACGGAAA AACTTAAAGGAATGGAAAGTATAGTCACTCGACATCGTGATAAAGAAATA GAAGCTAAATTCATTAAAGAACAGACCTCAACAAACCAGGAGAATAAATT TGAGGACACTGAGAAAAGTAGACTACCTGAAGATCACTCACCTTCTCAAT CAGATTCTGATGTTGATACTATGAATCGTATTGAAGCACAGTTAAAAGAG AAAGTTTCTAATCTACAAGAAGGTATACAAAATGCTAACTCTAGAAGTTA TCCTAATGAAGGACCTGAGGAAGAGAGTAAGCATGAGAAGTTCTTTATGA ATAGCTTCCGAAAGATTGGAAACTCTGAACAAGTAGGATCTGAATTTGAT AGCCATAGGATTGAGTCACAAGCTAAATACCATTCGAATCAAGCTATTGA AGGATTCAGACAACCTGATACCAATCAACCAATCATTATGGATACTAAAG CTATCGATTTCAATCCCGCCGATGGTGCTTCTATGGAAAATGACGATAGT GATCAGGTCAATAGCGTGAACTCAGATGGTGAGGAGCAAGTCGTTGAGGA GCCGAGCCAACGAAAGTTCGTCGGTAGAGACGACGAGGACGACGAAGATG AAACGAGTGACGAGGATCCCCATAAAGGGAAACTATCGGCGCCTGTGCGA AAACACTGGAAGAAACCCGAGGTTGATGAAGATTTTGTACCAACGAGACA AACTCTTATGAAATATCATCAAGGCCGTCATCACAATGCTCCATCTTCAG AAGAAGATGATACTGAGCAACAATATGATGTCGGTGAAGAAAAGAAATTA TCACGGCGACATAAACCACATCATAAGAAAATCGAAGAAAAAGATGACGG CGATAATGAACTTTTGAATCATTCTTTTATTGATGATGATGAGCAATTGA CCAATAAGAGGCATCATAAAAAGTCACGTGATCACGAGGAAGCCGAGAGT AACGAAAATGATGAAGAAGAGATCACAAATTCCCATCACCACNGATCACG AGGAAGCAGAGAGTAACGAAAATGATGAAGAAGTGATCACAAATTCCCAT CACCAAAAGCAAACTAATGGTGATTCAGAGGAACAAAGAACTCCGAAAGA AGGCAAAGAGAATTCAAAGATGTTTGAAGTAGAAGAAAGTCTTGGGGAAG CGGATGAGAAAAACAATATTGCCAGACATCGGTCCTTTAAACCAAAAGAA AGAGGTAAGGAAATGTTATTTTTCGATTTTATATAAGTCTGTGTAAACAG ACCCTACATCTAGGGAAACTTTTAAGTTCATTGAAAAAAAACTGTTGCAC TAAGCTGTGACACCATGTGAGATACACTATGGTGCATGCATGTGTTGACT CCTTCTGCTGTTAGCTCTTTGTCTGTCACTTGTAAAGTGTCGTATATGCT ACTATATGCTACTTCTTCAGAAATAGTTCAGAGATGAAGTTTCTATGCTA GATTTGTTAGGACTTAACTTTACTTTGTGACTCAGTTGCTTAAAGGTGAA TGCCTTTTGATGTTTTTCCAGATGATGAAGTAGACGATTACCCTGATTAC AATGAAGTAAAAGATGCCGCCATATTCGAAACCAATTTCCTACGAAAGAA ATTCCACGCTCAAAGTCTGCATTGGTCTGACCGCCTTTCAGACCGGGCTC AAAAAACAGCGGAAACAATTGCCAATGTACGAGATTTAAATCCAAAATCT ATATTAAAATATAAAAAGCCTGGACAAAATGTAGCCGTGATCGATATTGA TAGCACGAATGTCGGAAAAGAGGCTCCTGATAACTGGGCTAAAGAGTCCC GATTTTTCGATTTTCGTAGCCCTCAACTTACACCAAAGAACTCAGACTTT GCACAAATGATGTGGAAAGCGGAAAACGAATTCGGACTAGGCGTTGCGAA ATCTAAACTTGGTAATAAATGGATTGTAACATCAGCTTATGATAGCCCGG TTGTTGACCGATATAACGATTTGAAACATAATGTTGAATCCGATATCCCG ATTTCGGACCCCTATAGCGATATTACTGGTTAATTCGGTACTAATGGATA AAATCAAAAGTAAAAGTAGCAAGGTGGTTATTGTGGGAAGATTTACGGAG ACCACTGGGGTTGAGCTTTGTTTGGAATAGTTAATTATACATTGTCGAAA TAATCCTGACGAGCGACCACACTCACGGACATAATGCTAAACTAAGGAGG TGGCCCGCAAGCTAAATTACAAGATATATAAATTGATAAACCATATATAA AGTTCTTACCTATAAATATACGATTTGACACGAGAATCTTTTATAAAATT TTAATAATATAACAATATATAATATAATATTTGAAACAAAACGAATATTT ATTTACAAACGAAGTATCCGTTATTTATAGTTTGTAAATAAAACAACTCT AAACTAGACTTGAATTTTTTTGTGTAATTTGTAAATATGAACTTTAAAGC TAATTAACTGTTCATAAAAATTTAATTAAACTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061156TCONS_00061156Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061156-proteinTCONS_00061156-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:401814..408849 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3 0.21 0.16 0.12 1.02 0.53 6.25 6.95 2.11 1.69 4.59 4.22 8.6 7.48 6.87 17.59 8.21 7.8 0.44 0.26 4.7 4.49 4.23 4.87 5.67 7.51 1.43 0.64 0.31 0.17