XLOC_038349 (gene) - C. hemisphaerica

Overview
NameXLOC_038349
Unique NameXLOC_038349
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:1107362..1114863+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038349 ID=XLOC_038349|Name=XLOC_038349|organism=Clytia hemisphaerica|type=gene|length=7502bp|location=Sequence derived from alignment at scaffold_354:1107362..1114863+ (Clytia hemisphaerica)
GTACTTATATCCGCAGTGTCCATATAAATGATGGAATCGAGACATAATTA
ATTCTTTCTCTTACTATCTCAAACGGAAGAGGTCATCATTTAAAGACACG
AGATAATTCAAGGTAAGTCTAAAGTTCGAAATAGACTTGTTTTTTTGGGG
GACTTGTTTCTAATTTAGAATTTTCGCTACCGAGTCTGCTTTTAACCTAT
TACAATAATGGagtctccttaattcgaataGGATTTTTGGTTCCATCACC
GTTCCATCATCAGTTACTTTACAAACACCTCCGTaactaaaaattcaatt
ttaactAAAAATCTCTCTAATAATACCTTTGAATATCATAAAACTTTACT
TTACTCTTTCAACCATGATCTTTCaccttttttatgagatttaaTACTTA
CTGTAATCCTTTAGAATTAACTTCACAGataaaatcgtcaaaaaatagGG
TGGAAAGGGTCGCAGCGATCTTTTGTCCATACCTACTGGTATAGGACCGA
AAAAAATAAGAGATATCACTTAATGGGTTAAGAGCTATTTTCTGAGAGAT
CTAGGCAAAGTGAGTAAGCGATGCCTTTAGATTtccttcatttttggata
ttttgttcCATATGACGAAAAAAGCTcctgatattttttttgaacaaTTC
ATTTCCGTTGCTGAGATATGGCCTCTATTTACTTTATGTATAAAACGgct
acacgtttcttttttataagaacatccaaaatttttgaagccttcggatg
ttcttaacctttagagttttaagcctaaaaatattcttaaaatcttctta
tttttggcttttttggggtatttttgtccatttccctaagaaattaAGTG
TTTTAGCGTCcaccaagccttaaaatgctcttaacttattgttcttaata
ttttggccagcgaagctagttttttcttatttaaaaaaacgtgtagtgcc
CTATATTTATATCTACCTACAAAGAGGCCCCCCAGcagaccctcaattca
cgcaatcacgcaattatttttcgaaattcacgcattcacgcaaattttcc
tcgagtttcacgcaataacccaatttcgggaaaaatcggggaaacattgg
aaaatcgggaacacTGCACACAATCAGtggaaaaaaggggaaaattcacg
tattcacacacaaaatagcccagattcacgcattcactgGATTTTTACGT
TCACGcatgttttttcaattcacgcattcacgcattttttttttcaattt
tcacgcattcacgcaagcgaaaatgcccattcacgcattcacgcaaaccg
ctgggggggggcNTTAACttattgttcttaatattttggccagcgaagct
agttttttcttatttaaaaaaaacgtgtagtgccCTATATTTATATTTAC
CTACAAACTTGCGATTACGAAATCTAATTTTCTAAATACACTCGCAATAG
TGTATTTTACATTTTGAAGCAATTTCTTAAAGAAGCTTTAAGGAGATGGG
TTTGACCTTATCTCGGGAGGGGGTGGGCGACCAAACCTGCAGCCTAAAaa
taggcctttgaaatcggacccttgcagtgcagagaaaattgaGCCAAATT
GAGCCAaattgagtaaatttgggcgggaaatggacccttacagtgcattt
tcttgaaagtcTTTGACTACTCCAGGTCAAAAATGgtcagtttttcaaat
tttacatcctttttcttttctttgctcatttcgacccttagtGCACTTTG
AAAAGCTTGGAAAAAgaacccttaagggccgcacatacggtaggtcgttt
accaCGAGTGCCACCCTCCCCTGGGGACTTTATATAACCGAtggattttg
ttttttcttttagttgGACATTGATAAGCAAAAATGCCAGCCATTTCAAA
TAACTTACGAAACTACATAGAGCTGGTGGAAGAACGGAATATATCATACA
GGAAATCAGCCATCTTTTGGGATCAGGTACACAAATATGCCAATATCTCA
CTAATCATTTTGACCTCTGTTGCGACTGTCTTATCTGTAATGGAAAGTTC
GATTCCAGTGTATGTTGTTCCGATAATCACTGGAATTGCGACGATGATTT
CAAGCATGATCGGTGTCCTTAAACCATACGAAAAACGAAATGAACAAATG
GCTTCTTCAAGGAAATTTAAGAAACTGATGTTGAATTTAATTTCAGCTGA
AAGTATTGATGATTATAAGAAAGTGAGATCTGAAATCCAAGATGCAATGT
TGGATGAACCTTTTACGAGCTCtgttaaaaaattgaagaaacagCGAGCC
GCCGAGAAAAAGGATGCAATTGGTTCGAAATCTACAGATTGTAAGATACA
GATCGGGGGCCAAGACGAAAACGAAGTTTTCCAAAAGACAAACGcactga
aaaatcaaaagaaaaatcaaaagaaaacagatAGACTACAATTATGGGCT
TTAAGTACTAATCTGAAAATGGAAGTTTACAAGGATGAGCagaaatggtt
gaaatttaaaaaagaagaaggaatAAAGCGTACTTTTGATGATAGTGAAA
GTGTAAATGATAGCTGTGAGAATAAAGTGCTGAAAAACAGTGACGGTCGA
TCTATGGATCAGATTGATTCTGAAAGCACCACCAAATTATCGGAGGAAGA
AATGGATTTGGCTGTAGACTTAGACAGACCATGTGCAGCACGTAGATCAT
TTGACCATACAGATGGTGGTAGCATTAAACCAATGCAAATATCAACACCA
ACAAAGCTTAAAGATGTGCCAGAGAAAGAAATTCCCTTCTTGATGAATAA
TACAACGGATACGAATCATATCAAGCCTGATCACGATTTTATGGAAATTC
GAGTGCAACCATCTGGTAAATCAAACATAGAATATAGCTCGAAGTGTTTA
AATATACCACAGAATCCTGATGTAACTTTGGTGCCACTTACTTCGGAGAA
ACACCTAATTGGCGACCATGAAGACCATAGTCAATTATCTCGACAGAACG
CGGTAATCAGTGATCATTTGAATAACAACGATAACGAAGAATCACTCAAA
AACAACTGAAGtactattttttatttaatttgcaTAGGTTGAAAATGTgc
tattccattttatatcgATACAGGAGGATGATCGATTATTTCCAGGGGTA
ATTCGAGAAAAATTTTGCCAGGGGGTCTAAGGAAATCTTTGTTAACATTT
TTCCAGGGTGTAAGAGGCTATTCTCAAAATTCCAGTGGGTAAATGACTAA
TTTTCGTTCCGCGTCCACCTAAATtatgaagaaaaagattttcaagggTT
CTTcagcaaattttgccattttccagggggtatcatTACATtgtacattt
tgaaaaactttttttggcttaaaatggcTCGCCTatccccctgtatggaa
attaaAAGGAACATCCCAATTAGAAAGAGGCAACATGTTTTAATGCAATT
TTATTTGGGAACTAAACAATACTTTGATATTAAAGGACGTTTTTTGACGA
TTGTGCCAGCTGAAGTGTATGGAAGAAAACACAAAGGACCAAAGCTTTGA
TGAACAATTTATGCTCGTTAAGCTCAACAGCTTTTACATGAACACATATT
CATTTACGTAAACAGATAGAAAATTTTATTCCTtctgaaaaaattttgtt
gacAAATAGTCTGTATGTAAAGGGCTAAgataaaattaatttaaaattat
ttttcagggTGTGTTTTTCACTCTTCTATTTGACAATTAAACCTCTGTCT
GAATgccctggtggaactttttATAGAATCTATTGTTTCTAGTACAAACA
CCCGCGCAACTCTTTCCAATCTATACCCATTTTTTTCTATGTgcaatgaa
agttgaaatttcagggtattctTTCCACCGGGACCGATTTTTTGGCTATA
CTTTAATCAGTGGGGATGAAGGGATGAGAATCTACCagatctgtgacaca
ggggtgttgagaattttgttatttttcaacTCCTTCAGGGCTATGGGGAA
AATATAGGTTATTGAGGATTTTTTCAAAGCATGTGCTTAATTTTAAATGT
AATTTTCTTTACTTTGGCTGAAGCAAAATAGGTCATGTTTGTGTTCgttg
gaaaggtatttttaAGCTCTATCTTTTTAATGGTTCCACTTTCTTGAACT
AGATTACCAATCAAAAATGAGGAGTTTTAAAAACATGAGCTTAACTTGAA
CAATACAAGGGATAAAACTCAACAAATAACATCCCAAATAGAAACGTCGA
TGATGTTTGTACTGGGATCAAGAGTTTAAAGAGATGGAGACTAATTAAAC
AAATACTTATATCCGCAGTGTCCATATAAATGATGGAATCGAGACATAAT
TCAATCTTTCTGGAAGGGGAGTTTAAAAACAAGAGATAGTTCAAGGTAAG
TCTAAAGTTCGAAAGAGACTTGTTTTTTTTAGGACTAGTTTCTATTTTAG
AATTTTCGCTACCGAGTCTGCTTTTAGTATATTACAATAATGGAGTCTCC
TTACTTCGAATAAGATTTTTGGTTCTATCATCAGTTACTTTAAAAACagc
tccataactcgaaattcaACTTTAACTATAAATCTCTCTAATATAAGTTT
GAATATCATAAaactttatttcttaggtttcagcagtagcgtagacagga
ggggtgcataataattatcttttcataatataaaaagataattactgtgt
cataaaaatctactcCTACACAATTTTTGCGTtcctcttgtctacgctac
tggttTTAGCTCTTTCAACCATGATCTTTTACCTTCTAAATGAGATTTAA
TACTTAATCCTTTAGAATTAACTCCACAGATAAATCGTCAAAAATAGGGC
GGAAAAGATCGCGGCGATCTTTTGTACATGCATACTGGTATAGGACCGAA
AAAAATGAGAGATCTCACTTAATGGGTTAAAGACCCTAGCCAATATTTTT
GAAGCCTATGTAATCTTTTCTAAAGAGATTCCATCGTTATTTAGCGGCCA
ATATAGGTGAAAAGCGGTTTAAATAAGGACTAGAGCGTAAATCTGACCAA
GATTAACCTAGAGCTGGCGTAAAAAGGGTACGTTAAGCTAGGTGGAAATT
TTAATCCCCTGCTTACTATTACTACTTTAGTTTTTTTATGTCATGAAACT
TATGCCATAGTCTAAGACAAGTTTTATCTAAaaaggaacaaacgtgaaga
cgggagtTTTTTCGGGGTAGCTGTTGTCTTAAAACACAGACTCTATTGTC
CGCCacgcaacatattacgttttataatatacaaactatgttatatcata
ataatatattatctGGACGAAAAGCATCGTCTAATGCGAGTGTGTTTACT
CAAGTATTTACTTTGTTTATGTATAAGacggatacacgtttttttataag
aacatccaaaagttttgaagccttcgtaTGTTTTTAGCCTTTagagtttt
cagcctaaaaatattcttaaaatgttctaattttCGGCTTTTTTTGAGTA
CTTTTGTCCATTTactaagaaattaggtgttttagTGTCcaccaagcctt
aaaatgttcttaacttgttcttaatatcttATTGGCCagtgaagccttat
gttcttattaaaaaacgtgtagtgccCTATATTTACCTACAAACTTACGA
TTATGACTTCTAATTTTCTAAATACACTCGCAATAGTGTATTTTacattt
tgtaatattttgttttgctttaaGGAGATGGGTTTTACCTCATCCCGGGG
AGAGGGCACTCGATTTAAAAACAACTGAGCGTGCGGTCTAAAATTAGGCC
TTTAATATCGGACCCTTGCActgcagagaaaattttgccaaatttgagtG
AGTTTGGGCGGGAAATGGACGCTTACGGTGCATCTTCTTGAAAGTCTTTG
ACTATTCAAGGGCAAAATATGatcagatttttcaaactttacacccttac
agtgcaattttttttccttgctcatttcgacccttagaGCACTTTGAAAA
GCTTGGAAAAAgaacccttaagggccgcacatACGGTAGATCGTTTACTG
TACCATCCTTGGGGGACTTTATATAACCTAtggattttgttttttctttt
agttgGACATTGATTAGTAAAAATGCCAGCCATTTCAAATAACTTACGAA
ACTACATAGAGCTGGTGGAAGAACGGAATATATCATACAGGAAATCAGCC
ATCTTTTGGGACCAGGTACACAAATATGCCAATATCTCACTAATCATTTT
GACCTCTGTTGCGACTGTATTATCTGTAATGGAAAGTTCGATTCCAGTGT
ATGTTGTTCCGATAATCACTGGGATTGCGACGATGATTTCAAGCATGATC
GGTGTCCTTAAACCATACGAAAAACGAAATGAACAAATGGCTTCTTCAAG
GAAATTTAAGAAACTGATGTTGAATTTAATTTCAGCTGAAAGTATTGATG
ATTATAAGAAAGTGAGATCTGAAATCCAAGATGCAATGTTGGATGAACCT
TTTACGAGCTCtgttaaaaaattgaagaaacagCGAGCCGCCGAGAAAAA
GGATGCAATTGGTTCGAAATCTACAGATTGTAAGATACAGATCGGGGGCC
AAGACGAAAACGAAGTTTTCCAAAAGACAAACGcactgaaaaatcaaaag
aaaaatcaaaagaaaacagatAGACTACAATTATGGGCTTTAAGTACTAA
TCTGAAAATGGAAGTTTACAAGGATGAGCagaaatggttgaaatttaaaa
aagaagaaggaatAACGCGTACTTTTGATGATAGTGAAAGTGTAAATGAT
AGCTGTGAGGATAAAGTGCTGAAAAACAGTGACGGTCGAGCTATGGATCA
GATTGATTCTGAAAGAACCACCAAATTATCGGAGGAAGAAATGGATTGGG
CTATAGACTTAGACAGACCATTTGAATCACGTAGATCATTTGACCAAACA
GATGGTGGTAGCATTAAACCAATGCCGAAGTCAACACCAACAAAGCTTAA
AGATGTGCCAGAGAAAGAAATTCCCTTCTTGATGAATAATACAACGGATA
CGAATCATATCAAGCCTGATCATGATTTTATCGCAATTCGAGTGCAACCA
TCTGGTAAATCAAACATAGAATCTAGCTCGAAGTGTTTAAATATACCACA
GAATCCCGATGTAACTTTGGTGCCACTTACTTCGGAGAAACACCTAATTG
GCGACCATGAAGACCATAGTCAATTATCTCGACAGAACGCGGTAATCAGT
GATCATTTGAATAACAACGATAACGAAGAATCACTCAAAAACAACTGAAG
gactattttttttaatttaatttgtaTAGGTTCAAAATGTGCtatttata
tccatacaggagGTTGGACAagcatttccagagggtaaattcgaaaagaa
tttccagggggtctaaggaagtcttttttttttctttttttccagggtgt
aaaaagttattccaaaaattccagtgggtaAATGACTAATTTTCGTTCGT
CA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061120TCONS_00061120Clytia hemisphaericatranscript
TCONS_00061121TCONS_00061121Clytia hemisphaericatranscript
TCONS_00061122TCONS_00061122Clytia hemisphaericatranscript
TCONS_00061123TCONS_00061123Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061122-proteinTCONS_00061122-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:1107362..1114863 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.67	3.47	1.01	0.68	0.05	0.02	0.39	0.31	1.11	0.63	0.59	0.64	6.66	7.16	3.75	2.24	1.8	1.73	24.64	22.17	0.68	0.34	1.75	1.67	1.07	1.95	0.78	0.56	0.26	0.36