XLOC_038213 (gene) - C. hemisphaerica

Overview
NameXLOC_038213
Unique NameXLOC_038213
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_349:386537..394012-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038213 ID=XLOC_038213|Name=XLOC_038213|organism=Clytia hemisphaerica|type=gene|length=7476bp|location=Sequence derived from alignment at scaffold_349:386537..394012- (Clytia hemisphaerica)
GTTCGCTATTAGACCTTGATCAACTCAAAGTGTATTAATTACCAGATACT
ACAAAGTTTGTCAAATATATCTTGATCAAAATTGTAAAGGCTGTCGAATA
AAGCCAAGCAAATAACAAATTTGATCGAAATTTACCAAGAGAGAGAAAGG
GAGTTGTTGAATGACTGTTTGTCACAGCTTTGGGAAGGGTCATTGCTAAA
TTTAGAAGATAACTGGAAGGACTAGAACACTAGAACAATCTCAGGCTCAA
ATTTCAAAGATTTTACAACAATGCCGCGTTCTTTTTTGATTAAGCGAATC
GAGGAGAAAATGGTTACTGGGTATTTCCCTTGGCAGGATGAGACGCTGAT
GGAAGGATGTTGCTTGAAATATGAAATGGAAGATGGAATGGACCGCGCGA
CATTTGATGGAAAAAGAGATTCACATACAGGTAATTTGAAACATTTTTTC
TTTGCATGAGTGTGTCTTGAGTTTACCATCAGCCTATTTCATAGAATTCG
TACATCTGTTACATTTCATTTTCTATTCAATTTAAAAGGTGAAAATGCAC
AAATCTGGTGCTCTCACTGGTAGCCGGCTATGAGTTTTAAATTCAATTGT
TTATACAGTATATTAGAATTCGAACGGGAAGTTTCATTTTTTCGAATCAC
AGAGAAATTCAAATTTATAGGGGGTAGTTTAAGTGGGTTCCTCCTTCACG
GGGACTGAGAGCTAGTTTGAAGGGGTTACAGCAACAAGAAGAACTACAGG
TTTTTTGTATAAGAATGTCCAAAATCTTTTAAGCCTTCGGATCATGGATG
TTCTTAACCTTTGAGTTTTAGGCCAAAACTGTTCTTAAAATAGTTTTGTG
TAATTTACAAAGAAACCGGGTGTTTTAGAGTCCTTAAAGACTTAAAATGT
TCTTAACTTGCTCTTAACATTTTGGCTACCGAAGTCTTATGTTCTTATAC
AGTTTGTTCTTATATAAAACGTGCTAGTGTGGATTTTGAATTCCTACAAT
CGACAAACTTATAAACAATATAATGACAAATCAAAAATTACCAGAATTCC
ACAAAAAGAAATTAAAAAACCTATGCCAACCCATTGAACAGTTATAATTG
TTGTATTGTCAAACTTGGAATAAACAACACGCATTGGCTTGCTTTCAAAG
ACTTTTCATTTTCGTTTCGCTCCCTCGTTTACGTTTAAAATGACGTCAAA
AGGCATGAAGCCAATTACGTTAACGACTTTTTTGTTTACAAGTTTCTTCG
AAATTAGCATTCAACTATCATTAGAATTGTTTTCAAATAAGAATAGAAAA
CTCGTTAAAATGGTAGTCCATATCGTTAATTCCAAATGGTATGCCTATCC
AATCCTTTGGGACGAAATGGAGTTTTTACAAGTTCTTATTTGATTTGGTT
GGTCGTTAACCAGTAATAAAACAATTTTGTTACTTTTTCTAAAGAACGCG
TCATCTCTATCACTTCAAATGACCAATTAGTGAAGTATCTTGTAAAAACT
CCAGCTCATCCCGAGAGTCATGTGATACACTTTTCGACCAATGAGATCAA
TTTTTCGATGGGAAAACAAACTACTTTAAGTTAAACCAAAGTGCTCTGTT
TTCATCTAGTTCTGAGGCCATTTTAATTATTTTAAATTGATAAATAAAGT
CGTTAAAATTGTGATCCACCTATCTACCCTTCGCACTGAACGTCATGCGA
TAGCATACACTTATTTTCAACTTGGTTTCGGAGTGCATTTGTTTCCATTG
AATTTTAAGTATGAATGATAACAAAAAGTCAATTTTCCACCAGGATGAAT
TTGTACGGATTTTTCCACCAGGGAGACTAAATCTAAACCAAATATTCCAG
TAGAGTTAGGGTCCCAACGGGTCTGTGTCACATGAATATAAGAAAACACA
AACATAATACTGGACGAAGAGATTTAAACAACATATATCAAAATCCAAAA
AGTAGAGCAAATAAATGCGTTACAAGTTTTGATTTTCTTATAAAAAAAAA
ACAAAAAGCAATTAAAACATTCTCTTGCATTCCGTGCCAGACGCGACCAG
GGCGGGGCGTTCGAAACCACGAAGACGCCGCATGGTCAATCAAAAAGAGT
AATTTGTTACTCTTTTATGAGAGAGATTTTATAACCACTTTTGGATTTCA
TTCTAAAAATGTCCTTAAATGTTTTTGTCTTCGGCATTTTTGGTGTAATT
TCATGAGGAATTGCATGTCTTAGAGCTTTTGAATTTCATAAAACCGTCGG
CTTGCGCTTAAGACTTATATTCTTATATGGAAAAGAGACAATCGTTAAAC
GATTTTGCTTCGACTAATGATAGCCTTTGTATGCTCCGCCCTACCTTGTA
AAGATGGTTTCGAAGCTAAACTGGTCTCAACTTTTTGTTTACAGACTGTT
TCTATGGTGATGAGACATACAAAAAATTGAAAAAAGTATGTTTGGGAAAA
GTCATTCAGCTCCAAGCCGAAGGCTATAGAAGAATCTTCTTACCTCCCTC
AAAAAAGAAAAAGTGAAAGCCTTGGAATTTGCGTTTTATTTCGGATGGTG
GATTGAATCTAGCACCTTCATTGATTTCTGGCCTTAAATTTTTAATCTTC
TACCGGAATATGTAACTTTCAATCTTGTATCTGGATGAGAACCACGCGCG
CCGCGCAACCAATGTAGAAAATAAAAGGTTCCAAATCCTACATAGCAGTT
TCGTCTTTAGCATTTGGCGATACCCTATTCATGATATGCACCATTGCAAT
GTCTTCCGTTCCACCCAATAGCTGATTGGTTGAAAGTGACGTAATGTCAG
AAGACATTGTAGTGGTGCATATCATGAATTGGGAAAACTCGAATACGTTT
CAATTAATTAACTGTAATATAATACAGGGTGTCCCGAAAAAAAGTATCGA
GCTCGAACACGATTCTGAGTAGAAGGTTATCGCGTGTGTTTAACAAAATG
TAAGAAAATATATACCAACACAATTATTGTTTTTACAACAATCGTTTTGA
TTAAAAATAATTAACTCTCTTTACAATTTTCAGAACGTTAAAGTTATTGA
GAATTGTTTTTTGTAAAACTTATTCATAAAAGATGTCTCATGACAATTAA
TATGACACAGAGAGAAACTTTGATAAACATTGCAAATTTCATAGTGAAAC
ACACACAAAAACTTTCTTTCTATAGAAGTGTTAAGACTCGATATTTTTTT
TCGGCACACCCTGCACACATGAATTAAACAAACTAAAGAACTCTTTTTGA
AAATTAAAAGTTTCAAAAGACACTCTTTTAGCCGCCTCAATTTATAAAAC
TCTCGGCTTAGGATGAGGATGAGGATTTAGCACAACAAATACCAAAACTA
TTTGTTTTGAAATTAATAACAATATAGGCAAACATCTTTCTACTAGAAAA
TCTTTACCGATCACGGAAATGTAAACTCTTACATAGTACACATATTGTAT
TTCTACCATTATGGAAATATACGCGTTCGAATCTGTAGAAGTGATTCCTG
ACGTAAATCGAAAAAACAACCATTTAAATGCCCAGGCAACAATATTTCCA
TGTGTTTAATATAGGGAAAATATTTACCGGTAACGGAAATGTAACTGTCT
TACAAAGATTGTTTCTAAATACGGAAGCTTTAATTGATTTTTCCACATGA
AATTACATAGACAAACCACATTTGATTGTAATATATATTGCATCTTTGTA
GCATTTACATAATCCATTCTAAAATCAACTTTCTCTTTTCCCTTCTCAGG
ATCAGATAGCGGTATAACCTCAACATCGTCACCTTTTGAGATTCAAATCC
TGACACCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTAAAATATAAGAACGTTCTCCATCACATAGGCTCATTACAAAAG
GTAGTTACAACGTATAAATTAATCAATAGCCCTTTTACTATTCCCCTGTT
GCATAAATGCACGTCTTTAAAAATCAAAATTAATAAAAATTCAAATTCCC
TCGTTTTACTTTTTTATTGTTCCATACNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGA
GGGAGAGCTTAAAATACAATTTTGTGAATACACACTTAAAACTTTCTACT
CAATCGCATGTTCAAACTCGATACTTTTATTAGGGACACCCTGTAGTGAA
ACACACACAAAAACTTTCTTTCTATAGAAGTGTTAAGACTCGATATTTTT
TTTCGGCACACCCTGCAAACATGAATTAAACAAACTAAAGAACTCTTTTT
GAAAATTAAAAGTTTCAAAAGACACTCTTTTAGCCGCCTCAATTTATAAA
ACTCTCGGCTTAGGATGAGGATGAGGATTTAGCACAACAAATACCAAAAC
TATTTGTTTTGAAATTAATAACAATATAGGCAAACATCTTTCTACTAGAA
AATCTTTACCGATCACGGAAATGTAAACTCTTACATAGTACACATATTGT
ATTTCTACCATTATGGAAATATACGCGTTCGAATCTGTAGAAGTGATTCC
TGACGTAAATCGAAAAAACAACCATTTAAATGCCCAGGCAACAATATTTC
CATGTGTTTAATATAGGGAAAATATTTACCGGTAACGGAAATGTAACTGT
CTTACAAAGATTGTTTCTAAATACGGAAGCTTTAATTGATTTTTCCACAT
GAAATTACATNAGGTTCCAAATCCTACATAGCAGTCTCGTCTTTAGCATT
TGGCGATACCCTATTCATGATATGCACCATTGCAATGTCTTCCGTTCCAC
CCAATAGCTGATTGGTTGAAAGTGACGTAATGTCAGAAGACATTGTAGTG
GTGCATATCATGAATTGGGAAAACTCGAATACGTTTCAATTAATTAACTG
TAATATAATACAGGGTGTCCCGAAAAAAAGTATCGAGCTCGAACACGATT
CTGAGTAGAAGGTTATCGCGTGTGTTTAACAAAATGTAAGAAAATATATA
CCAACACAATTATTGTTTTTACAACAATCGTTTTGATTAAAAATAATTAA
CTCTCTTTACAATTTTCAGAACGTTAAAGTTATTGAGAATTGTTTTTTGT
AAAACTTATTCATAAAAGATGTCTCATGACAATTAATATGACACAGAGAG
AAACTTTGATAAACATTGCAAATTTCATAGTGAAACACACACAAAAACTT
TCTTTCTATAGAAGTGTTAAGACTCGATATTTTTTTTCGGCACACCCTGC
ACACATGAATTAAACAAACTAAAGAACTCTTTTTGAAAATTAAAAGTTTC
AAAAGACACTCTTTTAGCCGCCTCAATTTATAAAACTCTCGGCTTAGGAT
GAGGATGAGGATTTAGCACAACAAATACCAAAACTATTTGTTTTGAAATT
AATAACAATATAGGCAAACATCTTTCTACTAGAAAATCTTTACCGATCAC
GGAAATGTAAACTCTTACATAGTACACATATTGTATTTCTACCATTATGG
AAATATACGCGTTCGAATCTGTAGAAGTGATTCCTGACGTAAATCGAAAA
AACAACCATTTAAATGCCCAGGCAACAATATTTCCATGTGTTTAATATAG
GGAAAATATTTACCGGTAACGGAAATGTAACTGTCTTACAAAGATTGTTT
CTAAATACGGAAGCCTTAATTGATTTTTCCACATGAAATTACATAGACAA
ACCACATTTGATTGTAATGTATATTGCATCTTTGTAGCATTTACATAATC
CATTCTAAAATCAACTTTCTCTTTTCCCTTCTCAGGATCAGACAGCGGTA
TAACCTCAACATCGTCACCTTTTGAGATTCAAATCCTGACACCCTTTTGT
TCAGGAATGTCCCCTTCAACAATGTTGGTATCATCGTGCTGTGATAAAGA
CCATGGTGACATTGGTTCCCTCTCACCTGCATCTAGCTGCCACCATGAGG
GATCAAGCCCGTTCTTCTCTCGGTCTAGCTCCAGTCAGGATGGATTAGGC
TCGATCTCACCTGAATCTAACCATGACAGAGATTTACCGAGATCTTTCCT
ATCCACACATAGCTACAACCATATGGTAGCATGCTCGCTCTCACCTGCTT
CAAGCTACCACCACGAGGATGAAATGATACCATCCCCTTCCGGGCCACAA
CAACAAAAAATCAACGAAAATCATGTGGAACTATTATCCTCAACGAAAAG
GTACGGTAGCCTCCTTCCTCCTTCAAGATTGAGCTACCTACCACCTTGGC
AAGTGACCTCCTCAGATGAGATAAAAAAGCACCAATGTGAATACTGTCTT
AAATGGTTCCAAAGATCAAGTAGTTTATCAAATCACCGATTAATCCATAA
GAACTCCAAATCATACAAGTGCAACCAATGCAATATGAGCTTTCTTCGTA
AGTCTGACCTTGGTAAACACATGGTCACACATTCCGGATCAAAACCGTAT
CAGTGTAACGTTTGTGGTAAACGCTTTTCACAATCTTCGAATATGCTGAC
TCATCAAAGACGCCATACCGGGATCCGTCCGTATTCTTGTGGTGTATGCG
GGAAAGCTTTTTATCGGAAAGTCGATGTAAGGAGACATGCTTCAGTTCAT
AGGGGTTATTGAAAAAAGTCATTTAACAATATCCACAAATATTCCACAGA
CCTTTTTCTATATTTATAAATGTTTTGAGTGGGGTACCCAGTTGGTGTGA
GTTTATAAAGATTCCCGTTTATTTATGCCGGCAGTATATTTTTCTAGGAC
TTCTTTTCACAGGACTCGAATTTTAGGGGGTGAATTAATTCTGAATGTTA
GGGGAGTAGTGGTATGAAAACCAACATATTAAATCCTTGTCTCACAGCCC
TGGTGAAACTTTATCCCACAGTTGAGATAAAAATTCCATTGTTCCCAGCT
GAAAAAATCTCGCGGTAATGGTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060849TCONS_00060849Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060849-proteinTCONS_00060849-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:386537..394012 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.07	0	0.14	0	0	6.28	5.65	0.7	0.37	1.42	2.52	0.35	0.74	0	0	0	0	0.06	0.07	0	0	0	0.03