XLOC_038135 (gene) - C. hemisphaerica

Overview
NameXLOC_038135
Unique NameXLOC_038135
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_348:170398..178330+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038135 ID=XLOC_038135|Name=XLOC_038135|organism=Clytia hemisphaerica|type=gene|length=7933bp|location=Sequence derived from alignment at scaffold_348:170398..178330+ (Clytia hemisphaerica)
TCCATATTTTGTCCTCTCTTTGCTGGAATTTCCAAAGTGAAAATCTTTCG TCTGAGATTTGTTCGATTTCGAAACGTTTTGTTAGTGCTTTCTAATTAGA AAGCTTTGCaagttttttaggttttttgaagataaaCTGAAGGTACagca ttatttattttttatcgtgattttattcattttcccaTTTTGAAAGAAGG CCAGCTAGTGTTTACTTTTGAATATTCGAATGATTCAGATCGAATTTTTT GTCTTTCGAATGTCGAACCCCAATCGAATGCTTGAATGTTCGAAAAAAAC TACATAAAAGCCAAGTCTCCTCTGGTCTGAAGCCCAATTTGATTCTGTTN CGAATGCTTGAATGTTCGAAAAAATCTACATAAAAGCCAAGTCTCCTCTG GTCTGAAGCCCAATTTGATTCTGTTGTGTTTGGTAGAGGTTGAAGCCAAA AATCTTTCCAGCTAAGACATAAGATGGCTCCTTTTCTGTTTCTTTTTCGC ACAGAGTCATGGCTGATAAAGAATGCGAAGAGACAGCTATCAGCTTCAGC AACCCAATCTCGGTAAGTCTAgactttttagctgtttttgTCCAAAAGGG AAAAGAAATAAACTTGTAAACTTATTTATTGcacacaaagaaaaaatatt gcgTGACCTTTCTCCCTTTGTCTGACTGGAGAAAGGTCCTACCCAGAAGG AAAGACTTCGGCCNTGTCTCGAAGtgtactatcgattagaggggtcattt atagggtttcctaggctagatcatgagatatttgagtttgaaattttgct gactctgcgtttttcaacgtttttggcccttttctgctgtagtttcttgt catttttttccaaactgaggctgggcatgttcttacgatgttcttaattt ttcgacgaatttcagcctcaatgttcttNAAATAAAAAATGGAATTCTAT ATCTATAAATGTCAAAACAAAGGGGAAATAAAGAACTAATTCCCTAGTGA ATAGAAATAGACACGAACAAACAAAAGAGAAATCTACAAATCTATTTCAT NtgttaaaaaaaaaaatattcttaacaccTTACCTTTATTAGATTCCCCA ACCATTAAAGCCAAAccagaacattcaaaatttttgaaacctgcagatgt tcttaattttttgaatttcaagcctaaaaatattcttaatttcagCATTA TGTGAGTGTTTTTGTGCGGTTTCTTTtgaaattggatgttttagagtccg ttcaagcctgaaaatgttcgcaagggctctgaccataatgaatttttaat attgcCCTGTACAAAATGTagatttctgcctgatgtaaccaataaaacta tggcatgttatacatacTGTTAGtccaactattcctgaatctgaaaattt aaaaattacattaaaaaattttgatgaagaagaaaatgaagaattttgcc Ntctgaaaatttaaaaatcacattaaaaaattttgatgaagaagaaaatg aagaattttgccAAGAAGGGTATTTCTTTCAACTTTGAGaaccttatttt cggcgaagaaaaaccactttaaaatttatataaagttctttcttataaaa aaaacctgtaTCAAGCCTTTCTTGTAAAGTGAGACACCCCCCTTATGGAA GGGGGAGGGGTTCACATTATGAATTAATAGTACTTTCGGGtaataattta caaaaattcttgtCTCTACCCACTGGTCATGGGCAGTGGATGGTTAAATA AGAAGAATATTCGAAAATATTCAATTTGAGGCTGCCGAATCCAAATCTGA TACACGAAGCCCGAAGTCTAAAAATTTTGAGGCAAAGGCTTGGAGTTTTT GTGGTGAAAAAATGAGGGGAATTTCCCAAgaatcttcaaaatattttagc tTCAAACGCTTACTAATCGATAAAGAATTTTTTGATACGTAAAATTTAAA TACCTTTTTGTAAGTTGACTTTTAGTTGATTTTAGCCGCTGCCTTTTAAT CTCttgtcatatttttcttgtCAGCTTCTAAATCCGACTTCATGAAAGCA TGTGTTGTGTTTTGATAACTGCGGAGTACTGGGTCGAAATTTTTCTTCCC GATCGTTAAAAATGAAATCGATTATAGCCTAGCagtgttttgattggtca agCATGAAATCGACATCAAAGCattcgaaatttttttacacttttcaaaa catttagcTTGTACTGCTGTGCTGTTGATAGCTCTTTTGTGttggttttt tgttttgaaagttgtgTTTTGTTAGTTTGGGATTTCTGGAAAGTCTCTAT GCATCGTTCGAATTGTAAACGTTCTCGCTTCTCTGATTCCTGGAGATGGG GTCACGTGACAAGATCACTTGATAATGCATTCAGATTGAGACTTTATGGT TATGCTGGCATTAGAATTTCAAGGGTTGGAGTCTTAGATGATGTAATTAT AACTTTCTACTTTTCTACAAATTTAATCTCGCAGAAAATTTACGTTGATT ACAGTACGTTGATAAATATCAACTTCACAGAAAACAAATGTGTCAACAGG TTTTATCCAACCAGATCCAACGAGGGGACCTTAATCTGAACAAATTACGA CATTATATACCTTTCATttagatttgaattttcaaCCTGTCTTACTAGGG GGATTATGAAATTCATTGatcgttcttaaattgttcttaggttttgacta aaatttatccttattttttctcatttctagcTATACGTTCCGATCACCGA TGGGAGTGCAATTCAACAACAAAAACTTATCCCTCCAAATTCTTCCGTCT ATGAACCTGCTTTCAATgcagtaagttttttttaaatgcctttcaaaatt cttaaaaatttagtaATACTTATGGggaaaagaaaatgttaagtggATGA TTTTAAGACTTAAGAAAATCTCTCAAAAATCCCGAGAGAGGATTTTTTCT AATGGACCAAAAATCCtaaatttatactttttcctGGACTTTAAACTTCG TTGATTTGTCAAATCTTTCTTTGAGCAAAATATTCGGCAGAATGAGTCTA TTTTGCTCATTTTTGGCCATTTCCAGTGTACTTTATTTAGGCCAATCTTT AGTAACAGATTTTTACCCATTCCACAAGCCTATAAACGAAGAAAatcagt tttcattttctttagagAGGCCCTTCAAAAGACCTATGATTCACGCGATG GTGCAATTTTCTTTTCcaaattcacacattcacgAATATTTTTTCCTAAA TTCATGCAATTTCTGTTCACGAAAAGTTTTCCAAATACCCCATTCACACA TTTGCGCATTCATtcaaaccattgagtttaaagcccgaagggctagagtt caatctctaacctttctcaggcaacaaaaagtgaagccttaaaaaatgcg ccgacTTTTTGACAACAGATTgtatctagcaattcctttgtttacgattg atattttttttcgaaatttagcggcaaattttagtttcaatctgtcattt gtgtaaaaaccaggcgagccgctcaaggccgtgcaactttggtaggattt gttggcttcaaatcctaccaaagagattgacttctagcccttcgggctta tacttcattgattcAAACTCCAGAGCGCCCCCATAGAGGCTTCTAGCCAT CTTGATTGAGGATAAATCCTAAACGCCCATAATTATTCCGTTCAGGGTTA CTTCACGTTACTTCATTTGTTTGAATTTcatggttttttttatttttgaa cttttaaagcTAACTCATAGATcattgacagttacatcaaaatgccaaaa acattttgttcaaccaccttcacttcaagataggccaccatagaatgaac ttccttttataggatgaaccatattcatgtggctttcagccttgcactcc atcgcagagcctaatcaattttaatgacttttttgactaatgaccaagtt aaatttttctaatttttttatatttgagtattaaaaaggcatgcattcaa ataataaaggtttaaaatttttctctgggctagttaataaaatatctcaa ataggctctgtgatggagtgcaaggctgaaatcttgaagtgaaggtggtt gaacaaaatgtttttggcatattgatgtaactgattgaTGTGTATGCCTG TTGCAACAACGTCAGGGTTTTAATCAAACAAAACGATTGGGAAACATTGA GAAATTTGATCGTCACAGATCGTCAAATTAATCGATttaatgaaaaaagt tttcaacgctaaattgaattaaaagaagagataatcagatggtttgtgat atttggcatgtgtaatctttttattttcctgagcaaaatctcaaaatatt ttacctaaatattttctaaagtctattaattacaagtttttgacttttag taaaaaatttcaacgtaagaaccgtgtgagaaccctttttcagaaatttc aaattttgaaatctcgACTGTGGAAAATAATTACCCAAACATACTTGGAG GTTTTACTCAAGCTCACACATAAGCTTTCTTcaggccaaatatctcaaac catctgattatccctttataGCGCAGGCAATATGGGGCACTTGCAGGTGA ACAAGGTCTTCAACTGTTCCTACACATCTATATTTTGAGAATCACGATGG TTTTCAGGCTAACTCTCTATCACGAACAATTCAGGGGTGTCTTGAGAGCA CCTGGGGTCGTTTTTTCTAGCAGCTTTGCCTAGGGTAGGGCACTTGTTTC AtccaaactaatttttgaaatcatGTTCAAATTTCAGTTCAATTTAGGCG TGGAATTACCTCAGCATATACAACCAGCAAGCCATCACCAAAAGACTTTA CAACAACATAACACACAACCCTATCATCAACAAGCGTGGCCTAACCAGAC ACTCCAGGCTCAACACCCTACATTCATAGAAGCTCCTTCCACAGCTAACA AAGTTCTCCCCATTTTCGAAGGTCAAAGTTTCCCGTTTCGATTATGGTAT TTGGTCAATCATGAATTTTATGATGACGTAATCAAGTGGAGTGATGATGG GAATTACGTCATTATTACGTCAGAGGGGCGATTTGAAGATAAGGTTTTGA TCGAACCTCGAGATCGTATCTTTAAAACGACCAGCATGAAGTCTTTCATT CGCCAGTTGAACTTGTATGGTTTTCACAAAGTCCAGTTGGACAAGGATAA AAACTTTTCGCATTTGAACGTCAAAGATAAAGCGAGTTGGCCAGAAACCG TCTTTGCGCATTCATCTTTCAAAAGATCACGTCAAGAACTTTTAGGTGAG TAAAGCTCTATTTTCTCTAATTTAGGTGTCTAATGATAGCTCCcaagttt attaatttttttgattttgcccTAACTTGAAAGCTCTTTTGGTATATGAG AACGTCACTCACTTATCGTCAGGATATCgtagcgaaacggaaccgtagag tgtgaacatggtcttagattTTAGTACTGTCTCACCTCCTTAGTTAGTCT CCCAACAACTTTTATTACATTCCTGTAGAGCAAGTGAGACGACGTTGTAA AGTCAAGCaacacaaacaaacaaaagcTCAAGGTTTTCCCGTCGAATCTT ACCCGTCAACGTCGTCCGTCAGTAACCCAAAGAAACGGcgaaatatgttt ttagaaTATTCAAACATGGTAGCATCTTCATCTGCTTCAAATCAACAACA ATCTTCAACCCAACTCCAAGAATCACAGTCTGAAAATCTTCAACAAACGT AAGTCTCCTTTTGATCGTCTTAAGCGGGGGGAGGGGGAGACCTTAACGTG CCGCCGTCAAATAtcatgaatgtttggtaaatttgtgaccctgtcagaac aaaaaatcgaaaagaagACGAAAactttccaccctgaaaataaatagaca aaaagaaaaagaaaagaattaacCAAAAATCGACCGTGTCGGATATTCAA TTAATAAATTTTCCAGATTAGCCAGACCCTAAACAATAGACCCAGACCAG CAGTACGCCCCATACATAATTTTGCCTAAGTTAACAGTATCATTAGTGTT ATCTTGGAGATCTAGACGAGCTCTTGTCTTCAATCAACAAATACTTGTTA CtcactttaaaactttaaagaaTGAAGGAAATGCTTGGTATTTCTGCTGA GAGAGTTGCTGAAGATGTTGTACAATTTTTGCGAAGTTGTAAAATTTATA TGCTAAACGCCTACCActcaaaattattatttttttttcatataaaatta atattttaattttaaccTTCATTTTTACCCCTCTCATTTGAGCTTacaat tttcactttttgtttGCAGGTACAATCCATCAGCAAGTGAAATTATGATG CAATACCCTAACCTTTTACCACAACCTGATCAATTCTTAACTGCTGGACG CGATGGTAAGAATGTTGTGAAACGacttttttttaacattcaAACTAGGT GCAAAACAGTTAACATGGCTTTGTCGTTATGGGACAACACTCAACctttc gaaatttttcaaaaacaattaaattttcttaattaaagaaaatttacaGC AGATGTCTTTAATGTTTGCTCCATTCATAAAGAAAATTCGTTTAAAAGTA TTAAGGCCtattaatttttacaaaaaattgaatttcatgTTGCaaaaaat tagcattttttgaGACAAATGGTCTTGAGAAGACAATATTTGCCCTGGGA AGACAAAAATTGGTCTCTATGTCAAAATGTTCCAGAAATTTTTAGTACAT GTATACTAAAATAACAACTCTTTAAAACTCTTTTGGTATACACTAGACGG CTCCCGTCGTTgcaaacgccggtttagcttgcgcatcgaaagcccttagg atgataaagatggtattattattattgatgCTCTCTTTAATTCAAATAAT CTTTAAGGGTAATTTGAGTTAGTTAGCACATTGAGAAGTATACATTTATG ACTGAGATTTCAGTACCGATCCCCCTCCCTGAGTTTTAAAAGCTTTAGAC TTTCATCGAGAGAacacaaaactttcaaatcagGTGAATCCTAAAAACAG GTGTCAGGGTAATCTTTTGATGCACCCTAATCTATAATCCTTTCTTAAGG GCAAATGCACCATTAAATCTGCAAAGTCAAAGAGAGGTTAATTAGGGATC GTCAAACTTGGCTTTTTCATTGTAATATTCAAACACCTTTCTTTACCCTT GAATACTTCTGGGGTCAGAAATTTTCGAAGTGTTGTGAAATTTTCGACAT TTATTCTCGCGAATTTgacgaaaaacatttttaattttcgcctTTCAGCC ATGATGGCGACAACCTCCGCACAACGTCTCTCTCCCGCTTCTTCCGTCAA ACGAAACCTGCAAGCAATCGACTGGGGAAATATCTCAAACATAAATAACT CCTCAACAAGCACAACAAACGAAGATGTGTCACCGAGATTCGACTGTCAG ATCAACCAGTTACAATCTCCATCAACGAACCGACAAGTGTCTCTTCGAGA GAAAACCACCCATCTCNGAACATAAATAACTCCTCGACAAGCACAACAAA CGAAGATGTGTCACCGAGATTCGACTGTCAGATCAACCAGTTACAATCTC CATCAACGAACCGACAAGTGTCTCTTCGAGAGAAAACCACCCATCTCACA ACACCGCCCTGTTTGCCGCCCGCTGCTGAGCAATCCCTACTTGATTCAAG CATGTCAAAAGAGAATTTGAACCCTTTAGCTGATTTCTGTGCTTCTTTGT TTTACCCAAACAAAGAAAACGAGCTGGGCTGtgatgactgaaaatgactt ttttgaacttttggaaaaCTTAGCTTCCATTTGTAACTATTTACTTAgaa atttagaatttaaaattttcaccccTGTTATTCTCCACACTTTCGACCCT TTCTTATCCTAAACTAGTAGCGTTTTTTCGGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060637TCONS_00060637Clytia hemisphaericatranscript
TCONS_00060638TCONS_00060638Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060637-proteinTCONS_00060637-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:170398..178330 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.33 0.59 0.13 0.2 0.59 0.51 0.26 0.52 0.21 0.19 0.57 0.3 0.1 0.12 0.13 0.1 0.84 1.23 0.24 0.31 1.24 1.78 0.82 0.79 27.66 23.08 0.31 0.11 1.04 1.23