XLOC_038070 (gene) - C. hemisphaerica

Overview
NameXLOC_038070
Unique NameXLOC_038070
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_344:58034..64057+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038070 ID=XLOC_038070|Name=XLOC_038070|organism=Clytia hemisphaerica|type=gene|length=6024bp|location=Sequence derived from alignment at scaffold_344:58034..64057+ (Clytia hemisphaerica)
TTGAACAACCACTCCATAAAATAAAGTTGGTAACATATTCCGCCAACCtg
ttctaacttgggacaattgatcgaaacatgggactgtggGACATGGGACA
TACGACCCTGTCTATGACCCATGTCTATGTGGTCTTGTGTGGCATACAGT
TTCTACTACTTTGTCGGTCGCTTTGTCATAATTTGGAAAATTCTGTGATA
TGATCCGGATGGTGTTGGGATAactgaagaaaatgaaaatataataaaac
TGTAAGTCATATGAGCAGTAGTAGTAAAAAGACGTGATCTGGACGTGACT
ATGTTTGTTCATTGGCCGAAAGGGGGTGAAGTTTTGGACCTTGGTAAgat
gtttgaaaagaaaactttaacgactaaaaaactaattaacatgctttcaa
cgaagatatccaggtctttcattttagggctatgcatgttagcctccact
gatgcaagttacccaatctcacggtagagCAAAACTGAATTCTTATTTCT
GTACCGCGATTTTGCATCTTTACTGTTTTGAAAGGCACTTTTATCTTTTA
AGCAATGAAAGGGTTTCATAATTTTAGCTAAAATCAAGTTTCACTTAATT
CCCCTCAGCTTTTAGATGAAAATGCCTGTTTTGgcagagagaaaaaaaat
gacCAAAGAGGAGCTTGAAGCAATAGCTCCATTTATTTTGGAAATGCGTC
GAAGAGAGCAAACACAGGAAGCTGAGCTGTTACAACACATACAAAACATT
GATCAGAAAGATGATTTCAAAGTAGAGGAGGCGGAAGAGGAGGACCATTT
TCAGAGACAAGAGatgataaaattttttgaagatcaCTTGAACACTGTAC
GTCAACACATTGATGAGCAAGAAACAAATTTAACAAATCTGCAACAAGAA
AAACTTGATCTTTtcgagaatttcaaaaaatctttacaaatcaaacacaa
acaacaacttgaacaacaaaaacaacagcaACCAAAATGAAATGTTCTCT
TcattattgatttttctttagttttgtaAATAATCATTCAGTATTTATTT
CacccattttttatttcttttatatcCTCAGTATAACATAGTAAAACAAT
TGATAATTATTGAGAAAATTGAGTttactttttaataattttattcaTCT
GTCGCCTTGAGTTATGAAATAGAAATGCAACCTGGGTAATATTACATAAT
TGGTGTCTGCAGAGAAATGGACAAAACCTTTTAAAcctaatatgaaaaaa
aatgtcttttcgaGTTCTAATGAagcttttttccaaaattctcaaatatt
tgtttaaatttttctagtgaagtaaaaagaaaatcaaatacaATGCCTTT
CACAGAAGAGCAATTAAAAGGGTTTCTGGAAAACCTTTTGAAAggtcaag
gaaagattgaaaatgttgaatttaTCCATTCAACCTCTTTGATAGCCAGC
AGTTCAAAAGGTGTAATAATTCAATATGCTAACGGCACAACCAAAAAGCT
TCATTTAAAGCTTTGTGAAGATGGTACAACTCCTGGATTCTTAAATgaca
aattgaaaatatttgaacgaGAAGAATTCTTTTACAGCAGTCTCTTACCA
GAAATGATCAAATTTCAGATAGAAAATAAAACAGATGAGAAATTAAACCA
TGAAAACAGTATCAAGTCATTGTTCTTCCCATACCATGGTAGCCATCATG
TTGAAGGGGCCggtattgttgttgttttggatCGTTTCTCACCAGAAGAA
TATTTTGTGACCAAACCTGAGGAGTTTCACACTTTACAGCAAATACATCA
TTGTATGAAGAAGATAGCAGCTTTTCATGCTGTATCATACTCAATGAAAA
TCAAGAAAGTTGTCGATTGGAATAATTACAGCCCATACCTCCCTGATGTT
CTTTTCCATCCTTTAACTGAAgatgtctcaaaaacctattTCAGTAGCAT
CTTTGCAAGTAATTTGAAAATCTTACGTGCCATCAAGGAGGAAATTAAAA
ATGGAAATCAACTGGTTGAAGACTGTATTCTGAGTTTCAATTCATTATCT
GCTGGTATATTGGACAGAATTGAGAAGTTGATACCAATGTTGCCTAAAAT
TCTAACCAAAACTCTGGAATGCCCTGATGAATTACTTATTGTGACCCATG
GAGATTTTCATATGTGGAATATTGCATTTGCTAACAAAGGTGAAATGGAA
GCCAAATTCTTTGACTTCCAAATGTTACGTACAACATCAGGATTGGTTGA
TGTACACCATTTATTATCACAAGTCTGCACGCCTGCTACAAGGAATCAGC
ATTTGTACAAATTTTTAAACACATATCACAAGTCTTTTAAACAGGAGTGT
TTGGATCTAGGCTTGGAGGAATCACAGATTGATTACTCTTTAGAGGCGAT
AAATAAAGAGTATGTCATGCGTTCACCTTGGGGTTTTGTGTTTGGTTTCT
GTTTCATTTTACCAAGATTCTTATCAAGCAAACAGCTATCACAAGAGTTT
TATGccaaattaaatgactttgaaagCAGTAGCAGCATTGTGGAATGGAT
TTCTAAAAACGCGAGTCCAAATGTGTGGAGTGTTTTGGATATGTATGTGG
ACATGGTGCAGATAGATGATGATCTGGGTACCTTAGAAATCATGGAGAAA
TATACTCAATAGCCTCTGGctctttttaagtttttttcaaattagctaca
atttgttttttaaaagcttACCAGATTGATTTTTTTACCAGAAAGACATT
AGACAAAATGCATTTTATAGTAGGTGTCTATTTTCCTAATTAGAAGTTGA
GGTTtggccaaaatcaaaatttattaggACTCCGCTCTGttctttattga
ttttgtaagttttaagtgttaaaaatgttaaaaaaaaggacTTTTTCGTA
TACAAAGCAATCTAAGATGAAATAAACTTCTTCTGAttgtttattgaaat
ttcaaaccaCCACcattagcttgaaatattgataCCAAATCTAATCAGCT
GCTCGTTTGAAATCTACTTAGATTACGAATTAGTTTTTAACtttaagatg
aaaataaaacttGTGATACAAATCCATATTCATGTTATTAGTTGTAATAC
AAAAACGAAACGTCCAAAATATATTTAGTTTCTGGAGATTAGATTAGCTT
TTTATTTGGACTTGCATTTGCATATTTTTACAGtggaatatatttttaaa
attttgatttaagaaataaaattatttttatgcaGTTTTAATGTCTCCTT
GATTCACTTTTATCAACCTTTCAATGTCATATTCTGCTTTTTAATTGTCT
TATTAAAATCAGATCGTATTCAGTTATTGTTATCAATCTTCACTGAAATG
CCAGCAAGATTTCATTCTTTGTccataaaatataaatttcaataatttta
atttccccaatttttaaaatttacacTTGGAACACAGTTATTTTCAATTT
AGAACTAGAAGCATANATGTCTTTTCGAGTTCTAATGAagcttttttcca
aaattctcaaatatttgtttaaatttttctagtgaagtaaaaagaaaatc
aaatacaATGCCTTTCACAGAAGAGCAATTAAAAGGGTTTCTGGAAAACC
TTTTGAAAggtcaaggaaagattgaaaatgttgaatttaTCCATTCAACC
TCTTTGATAGCCAGCAGTTCAAAAGGTGTAATAATTCAATATGCTAACGG
CACAACCAAAAAGCTTCATTTAAAGCTTTGTGAAGATGGTACAACTCCTG
GATTCTTAAATgacaaattgaaaatatttgaacgaGAAGAATTCTTTTAC
AGCAGTCTCTTACCAGAAATGATCAAATTTCAGATAGAAAATAAAACAGA
TGAGAAATTAAACCATGAAAACAGTATCAAGTCATTGTTCTTCCCATACC
ATGGTAGCCATCATGTTGAAGGGGCCggtattgttgttgttttggatCGT
TTCTCACCAGAAGAATATTTTGTGACCAAACCTGAGGAGTTTCACACTTT
ACAGCAAATACATCATTGTATGAAGAAGATAGCAGCTTTTCATGCTGTAT
CATACTCAATGAAAATCAAGAAAGTTGTCGATTGGAATAATTACAGCCCA
TACCTCCCTGATGTTCTTTTCCATCCTTTAACTGAAgatgtctcaaaaac
ctattTCAGTAGCATCTTTGCAAGTAATTTGAAAATCTTACGTGCCATCA
AGGAGGAAATTAAAAATGGAAATCAACTGGTTGAAGACTGTATTCTGAGT
TTCAATTCATTATCTGTTGGTATATTGGATAGAATTGAGAAGTTGATACC
AATGTTGCCTAAAATTCTAACCAAAACTCTGGAATGCCCTGATGAATTAC
TTATTGTGACCCATGGAGATTTTCATATGTGGAATATTGCATTTGCTAAC
AAAGGTGAAATGGAAGCCAAATTCTTTGACTTCCAAATGTTACGTACAAC
ATCAGGATTGGTTGATGTACACCATTTATTATCACAAGTCTGCACGCCTG
CNaaagatttttttttttgactttaaacatagacaaattatataccaatc
gatcacaaattttatgctgattaagaaaaaggtcagaatcatggtctgaa
aatttcgttttctggagatatgaagctttttcgatttcgattttttgtaa
tgactacttttggttccagatttgcgtggctgtaacatttgattggctca
cttaatttacttgaaattttcggagggtcttgcctactgttcaaataatg
aaattcaggaaaagttttttttctacatgaatttcgaaatccataatggc
ggattcaaaattttctttcgtcacatgggctcttaggctctNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtagcagagcctaagagcccatgtgacgaaa
gaaagttttgaatccaccattatggatttcgaaattcatgtagaaaaata
aattttcctgaattttattatttgaacggtaggcaagaccctccgaNTTT
TTTCAAATTAGCTACAATCTGTTTTTTAAAAGCTTACCAGATTGATTTTT
TTACCAGAAAGACATTAGACAAAATGCATTTTATAGTAGGTGTCTGTTTT
CCTGATTAGAAGTTGAGGTTtggccaaaatcaaaatttattaggACTCCG
CTCTGttctttattgattttgtaagttttaagtgttaaaaatgttaaaaa
aagtactttttcgTATACAAAGCAATCTAAGATGAAATAAACTTCTTCTG
ATTGTTTATTGAAATTAAACCACTACCATTAGCTGGAAATATTGTTACCA
AATCTAATCCTGCTCGTTTGAAATCTACTTAGATTACGAATTAGTTTTTA
ACtttaagatgaaaataaaacttgttactctaggggctgagttaggtccc
gtatgcgcatcggcgtatagtcattttttcttttgatcatgaaagtatag
tccttgaagagtcagaaaacgtgtNcatttcaaaaaatcaaaatcgaaag
tgcttcatatctgcagataacgaaattttcagaccatggttctgacattt
ttcttaatcagcataaaatttgtgattgattggtatataatatgtctatg
tttaaagtttaaaaattttttttttcaagcaagagggctaaaaagggttg
aaaatctaaaatccgccattatggaaatttgtgcctgatccaaataacgc
cacacacgttttctgactcttcaaggactatactttcatgatcaaaagaa
aaaatgactatacgccgatgtgca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060524TCONS_00060524Clytia hemisphaericatranscript
TCONS_00060525TCONS_00060525Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060525-proteinTCONS_00060525-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_344supercontigscaffold_344:58034..64057 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.01	26.66	110.12	127.6	26.54	19.16	17.3	22.02	17.07	17.36	21.08	11.64	12.38	12.56	8.01	10.49	8.96	8.73	8.16	8.55	10.39	8.57	26.48	23.85	6.97	9.65	32.9	29.89	23.18	22.79