XLOC_038003 (gene) - C. hemisphaerica

Overview


Name	XLOC_038003
Unique Name	XLOC_038003
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_341:436988..446608-

gene from alignment at scaffold_341:436988..446608-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_038003 ID=XLOC_038003|Name=XLOC_038003|organism=Clytia hemisphaerica|type=gene|length=9621bp|location=Sequence derived from alignment at scaffold_341:436988..446608- (Clytia hemisphaerica)
GACCGCCCGTGTAGCGAGAAAAAAGGGAAAAGTGATATCCAAAAGCTTAT
TTGGAAGAATTTTTTTAGGAAGCTGCATCTTGATTTGGATTTCAACTTTG
CTTGGTTTAGTTTGGCCTTGGTACCTGTCAAAATCAAAGTTATCATTTTT
AAGTTCCTGGCAATCCACCATTTACATTGCATATCATTTTTTTAAATCAT
CATTGAAAGGTTTGTTGCTGTTTTGGTTTATACTCTCCTAAATTCTGATA
CATTAAACTTTTTTAAGTTAAAGGAAGAAATTTTGTCGGAAAGAAAATTT
GGCGGTTTTTTGGCCAACCATAATCCGCCAAATTAAGTTCCTGCCAAATT
AAATTTTTCCCGCCATCTGCCAAATCAAATTCCCGCCAAATTAAAATTTT
CTCAAATAAAAGGGGCTATTTTTGAACATTTTCATCTTAATTTTAATCCT
TGTCCTTCAGTCCTCCTCTCCTTGAATTCACCTTTCCCGTAATTCATAAA
ACTAATACGCGCATTATTTTGATGCTCTCCACCTTTTGGTCTCTGGAAAC
AGTAAAACAATGTGAATAATTTCTTGATTATCGTCAAGCTTGTATTGATT
GTCGAGATGCTAAAAAAGTCAAGGACGTACCTTTGTCGCATAACGACCCA
CGGCATGGCCCAAACATGTTCGGGCCTGTTCGGACAATGCTCGGGCCACA
AAAATGTATTATTGAATCGGCCTGAACATTTTGTTTGGACCATGTTCGGG
TCAAAATACCCAACAAACAAGTCTAGCTATCATGTCTTTAAAGGAACATT
ATAGGAATAGTAGAATTTAATTTTATTTACCTTTCCTGGTTTATCATCAT
CCATTGTTAAATATTTTCATTAGACAAAATCAAAGTTCCAAATACCAGTT
TGATTCACAAAGTTGTATAACAGTACAAAAAACGATCCAGAAAAATTCTG
CTTCGAATAGGAGAAGACCATGATAGGGTGTAAACTGGATTTTGAATTTT
AGAGTTTCAAAATTGTCACAATTTTTTATCAAAATTTATTATATTGTAAG
ACTTTTCGCGCAATTTTGAGGTCCATAAGTCAAAAATCCACTGTTTGCCC
CAGGGGTATCTGATTCGCGGTAGTAGCAAAAAACAGCAAAAATGGCATTT
TTTGTCCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNCCAGGAAATGGTCAAAATGGTTTCTAAATGGTGTCTTGTACTAAT
ATTCAACATAAAAAGACAAAATAACCCCAGCGAGATCGCTCAATGTTTTA
ATTTCAGGCTAAAAAGGCCGATTTTCTCGGATTCTGGGTAGCAAAATGCA
TGAAAGCAGCATTTTTGAGGACCCACAACTTTTAAACTTTTTAAGGTACA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TGCCAATATTTCAAGCTAAAACTTGGTTTTCTCTGGCTAAAATCTCAAAA
ATGGTTTCAAATGGTGTCCTGAAATCTTTGGGTGTTGAAAGTATTCAGGA
AATACTCTGCGAGAATCAAAATGGTTTGGGTTAGAAATTTGCCAAAGTCC
GCCATATGGAATTGCATTTCCACTTAAAAACGCGATATTTAGAGTTAAAC
TCTAATTTTCTCAGACTAAAATCTCGAGAATGGTTTCAAATGGTGTTCTG
AAATCTTTTGGTGTTGAAAGTATTCTGAAAATACTCTGGGAGAATCAAAA
TGGTTTGGGTCAGAAATTTGCCCAAGTCTGCCATTATGGTATTGCATTTC
CCACTAAAACGCAATATTTAGAGTTAAAGTCTGTTTTTCTCAGGCTAAAA
TCTCAAAAATGGTTTCAAATAGGGTCCTGAAATCTTTTGCTGTTGAAAGT
ATTCTGGGAACACTCAAGGAAAATCACAGTGATTCACAATGGTCATATAT
ATGCCAAAGTCTGCCATTATGAATTTCATTTCTTTAGGAAGAACACTCAA
GCTTACTCAAAACATTGTGTTTTAGAATGAAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTGTTTTAGAATGAAATACAATTCCAT
AATGGCAGACTTTGGCAAATTTCTGACCAAAACCATTTTGGTTTTCCCAT
AGTATTTCCAGAATACTTTCAACAGCAAAAGATTTCAGGACCCTATTTGA
AACCACTTTTGAGATTTTGGCCTGAGAAAATTAGAGTTTAGCTCTAAATA
TTGCGTTTTAGTGGGAAATTCAATTCCATAATGGCGAACTTTGGCAAATT
TCTAACCCGAACCATTTTGGTTCTCCCAGAGTATATCCAGAATACTATAA
ACACCAAAAGATTTCAGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAGGACCCTATCTGAAACCATTTTTGAGATTCTAGCCTGAGAAAATTAGA
CTTTAACTCTAAAAATCGCATTTTAGTGGGAAATGCAATACAATAATGGC
ACACTTAGGCAAATTTCTGACCCAAACCATTTTGGTTCTCCCAGAGTATT
TTCAGAATACTTCCAAGATTCAAAGATTTCAGAACACCATTTGAAATCAT
TTTTTAGATTTTAGCCCAAGAAAACCAAGTTTTAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAATTGCGCAAGAAGTCTT
ACAATATGATAAATTTTGATAAAAAATTGTGACAATTTTGAAAATCCAAA
AAAAGTATTTTTTCATGGTTCCAGTTTACACCCTAACCATGAGAAAAGGG
AACGGGATAAAGAATAAAAAGAAGACCGTCTCATGGCATGGACCAGGGGT
TTAGACCATATTATGTAAGATTCAAATGAGTCTGCTAAATTGCGTGGGTT
GCGTGGGGGCATGGGTCAATATTTTTGCGTGGGTTAATATTTTTCGCGTG
GGTCATATTTTTTGCGTGGGTCATTATTTTTTGCGTGGGTCAAAGTTTTC
AAGTTTTTAACTTATTTTCACTAGCCTTAAATTTTTCGCCGATCGTCGTG
ATTATCCTGGATTACCTCAGTGCTCAGTATTATTTGCAACACAAACAGAG
TGGAGGAACGTAAATTGCGCGTAACCCCTTTTTCTAAACTCGGCCTCATT
TGCATCAATGCAGGATCTTACTACAGATTATTTTAGAACTTTCCATGTTA
TTACAGTAAGCCAAAAATGAAATTGAGAAAAACACTTTTTAAAATCCCAA
AAACCTTTTCCTCAAATGTAGTAATAATTTTACAATTTTCAAACACCTTG
ACAACTTTGCCTTTATAAGAACATCACATTTTTGCTGACTCAACATTTAA
TGGTTGAAAAAATTGCTGTTTTAGGCAATAATTACCGTTTTTATGTTAAA
TACCCAACCGTCAATGTTTTTGACTTTGTGGCAAAAAGGCAGGTCTGTTA
TAGAATTGCAGAATTTCATTTCATTCAGACGCATGTAATCGTTAAGACCT
TGCCGTACCCTTAATATACTAGGCAGTACTAGGACATAACATCATTATAA
TATCTTTTTAACATTCAATTCACATACAAAAGCTTCCAGAGGCTCCTCAA
TAATGGAAAATGCCCTTCAGCAAATTTTTATTCTTAAAAGCAGCCATAAA
TTTAAAAATTTACCGCTTTCTTAGAAAAATTTGCACAGTTGCTTTGTTTC
TTAATGTTATTAATTAATTCTTTGTTTCCAATTAACTTGGTGCTACTCAT
TAAAAGACGCCGGAATTGGACTATTGTGTAGGGATCGCAGCGTAAAGAAC
AGGTCTACTAAAACAAACTACTCTACACTCCCAGTCTACTTGTTGATTAA
ATATTTCTATCGCAAATAAATTATGTTAGACAGTAGAAGTAATTCTAAAT
AAAAAAGACTTCTAAAACAACTAACTAACTTTGTTGCTGAGAAAAAACAA
AATTGATGTTTTAAATTTTTTTTATTTTCTTTTTTAAAATTAGAAATCGG
AGAAAATAATAAAATAAAATTTTATGAAATTTGCTAAGTATCGATTTTTT
AATTAAGTCTCTCTTAAACAACTCTTCTTTTTAGCACATATGCAGGAAAA
ATGTACTCTTGGAGTTGTTTTTTGTGGATAGGGAAATCCCATGAGCGTCC
AAGCAAATAAAACTGCTATTTGGCTTATAAATTTAAACCAATTTGTAACC
AGTTGCATAATCATGAAATACCATTTCCTAATCAATAATGTTCTCAATGT
TTTGTTATGATTTCATTTCAGCCACAATTGAATCAATACCATGTCATCAA
GAGCATTACGTTCCAAAGCTAAAATCAAAGTCATTCCTACTCGAAGTTAT
TCTGCATCATTGCGAGGCTCTAAACAAAGAGAGCCTTTCCTATCATTAGA
TTCGTCAAAGAAAACCACACCAAACAAAGAGAAAACAACTCGTGGAACAA
GAGGACGTCCACCTAAGAAGCAAGTACCAAGTCCAAAAGCTGAGAAGGAT
AAATCCAGCAATGAGCAAGATGATACAATCACTGAAGCTGAAAATATTGA
CTTCCAGGTCATTAAGAAAGAGCCAGACGTCAAAGAGGAACCTCAGAGTA
AAGTTGTTGATAATGAATCAAATAATGTACAAGAAGTTACACAGAGAAAT
CATGAAAACGAGGACTCAAATCAAGATGAAAACCATACTCATGAGGGGAC
AGTGAGTGAAGAACAAGCTCACGAGGGGACAGTGAGTGAAGAACAAGCTC
ACGAGGGGACAGTGAATGAAGAAGAACCTTCGAAAAGCTCTCCCAAAGAA
TTGACTATAGTGCCACCATTAAAAAGGAAAAGAGGGCGACCTAGAAAAAC
TGAATTCTTGCAAACTGACACTGTTGAGAATATTGCCAAGAAACTTAAGA
CCGAACGGGATCCAACTCCACCAGTTGTTATAAAAGAAGAACAGAAGCCC
ATATCTCCTGAACCGCCAAGAAGAAAACCTCGTATGGCCAGTCTGAATGC
GTTGGCTAAAGTCAATGCAGTTCTGGACATTTATCGATTTGAAAAGTTGA
AAGACATTATAGATGAGCAGTCTTCCTATGTTGATACTGTTGATATTAAA
AAAGAAAAAGAAATGAAATCTAATAATAAAAAACAAGAGAAAACTGATAA
AATTGATGTGAAGATTGAAAGTAAGACTGTATGTGAAACACGTGAAATGA
AAGCTGAGGAGGTGACAGTTATTGAAGATGAGGAGGAGGAGGATGAAGAA
GTGTTTGTGTGTCCTTCACCAGATCCTCCAACTCCACCGCCAGAAATGAT
CACACAGTCCATACAAACTGAAAATATCCATCATTGTAAAAGTGTCCAGA
CTGAGAGAGTCATATTTGTGGATGACCATTCTACAGTGAAGACTCTATGC
ACGTGTTACGCTAGCAATAAGAAGAATGAACTTAAACATCAGCATGTCAA
AACAAACTTTACTGAATCTGGGTTTCCAATACACATTAGATCCACTGTTT
TAGCTCATACACCGTCATATACGGTAGCTTTACCCATAGTGAAAACACAC
AAATGTCCAAAAACTGAAAACACACACAATCTAACCAACATAGGAGGTAT
TACTGCAAACGTAACATCAATGTTGGATAGATGTATTTCTAGGACCCTAT
TTCAACATAATTACTACCCAGAATGCACAAAACTTGCACAAATGTCAGCT
CAAAAAGAAGCCATTGAAAAGAAAAAGAGACTTGCGGAATTAGCCCAACA
GCGGATCGATCAAAAGAAAAATGCGCAGAGGCTAGTTATACCATCCCTTC
ACTGTGAACCAATTTCAATATCCATACCAACTTCTGACAATTACCAAAAG
GACATTACTAATAAGCAAGTCGCAAAGAAAAGTTACAAAAAGAAGACTAA
AGAAAAAGCTCAGGTGCAAGAGCCAGTCAAAAAGCAGGTAAGATTTTTAA
TAGGCTGCGCGCATTCCCTCTCATATATTTTGATATAGGGAATGCTACTC
GTGTTTAAAATTCTTGTCTGAGAGTTACCCCAAATTTAGGGTAGCCTGTT
TGAATTTTCTTCAAAAGGTTTAGAAATCCAATGGTTGTATTTTAACCTCT
AGCCATTCAGATTTAATGAAGTTAAAAAAAAAATCACATAAAGATCTTAC
TAATCAAGCTAATCAAGTTTCTAAAACTGAAAAACAGAACGGGGGTAATT
CTCGAACGGAAATTTTATGTACATTGCTATAACATTACATAGCGTCAGCC
CCCCTGCTGGTTGGGGGGGGGGGCTACACCCTAAAATTTTCCCGAAAAAG
AAGGGGGCTGGAAGTACACCACTTTTTTGGGGGACCTATGTACTTGGGGG
GGAGCTAAAGTAACGTGGGGGCTAAAGTAATTCAGCTTAATAGTTGGCTT
CAATTACTCAAATTGAAGCTCATGAATCTGAAAAATTTTCGCCTGCGGCG
CAATATGTTTATAGATAGTGTCCAAAATATTTTATCTTAAACTTATCATA
AACGCAATTTACATTGGGAAAACTTTTTTTACTGGGATCAATTTATTGAA
AGTGTCAAAAGACCTGGGGGTTAACAAAAGATTCATAAATCTTTAGGGGG
ACTTAAAAATCAGGGGTGACCTAATTTTTGCCTGGGACCTAAACCCAGGC
TGACGCTATGCAATACATTCCTATACAGTATCAAATCATATTAGAGCTAG
ATTTTTGAAGTCAAGAGTATTCGTTTTGAGTGTGAACTGAACCTTTTTGA
TTACCTTTGTTTACTGAAAGATATTCTCCATCGCACTGTTCATATTACAT
CTTTTTAAAAGTATAAAGCCTTTAAATCAACACGTTGTAGTCTCTTAAAA
TATTCTTTTTACAAATCACTTATTCTTTAAACAGTTCATTTTTCATCCCT
GCCCATACAGGTTTAAAATATTGGTACCATTGGTTGTTTCAAGTGATAGA
TTAATTTGTAGTGCTCTTTTAACGATAGTAGACGGTCATTCATTTTTTTC
AGGAAAGTATTGATACGGATGAAAAAGCAGATGATCACGGTTGGCGGTTT
GAAGGAGCACACAGAGAAGAAAATACCAATGTGGTAATGACAAAATATCA
AAGTGTTTTATTGAAATTCAG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00060431	TCONS_00060431	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00060431-protein	TCONS_00060431-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_341	supercontig	scaffold_341:436988..446608 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.37	7.42	3.02	3.02	14.93	10.89	12.47	12.06	5.64	7.28	8.48	4.99	7.57	7.74	7.73	9.48	8.85	10.09	4.69	5.17	7.03	6.69	18.66	18.23	11.48	12.63	4.17	3.58	14.21	15.42

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XLOC_038003 (gene) - C. hemisphaerica