XLOC_037917 (gene) - C. hemisphaerica

Overview


Name	XLOC_037917
Unique Name	XLOC_037917
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_339:369181..380851-

gene from alignment at scaffold_339:369181..380851-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_037917 ID=XLOC_037917|Name=XLOC_037917|organism=Clytia hemisphaerica|type=gene|length=11671bp|location=Sequence derived from alignment at scaffold_339:369181..380851- (Clytia hemisphaerica)
GGAATATATTGTTTAATTCAGGACCAAGTGAAGGTCCCTTTTATTAGAAA
AATTTCAAATTACTTCAATCCAATGAAAACGTAGATTGGATTCGATTATC
AAGAGAGATAGTTTTTGTGTTCGAAGTTCTTTTTATTGGACTTGGACAAA
AGCAATCAACATGAAAATGGCGCTTTCAATAGCGTTCTTTATAACCGCCT
GCTACCAACTTGCTTGTGGTGCCAAAACTGCGAATTACGCATGCCCAGAA
ACAACGAGTGACGATGATTCAGTCGTTATTTTCGGATATGTAGTGGAGCA
TGACAATGTTACGGGCACGATACGTTTTCAAACGTTGGAAGTTTTGAAAG
GCGGCAATTGGTCGGATATCGACCAATCAGAGATCGAGGGGCGATTAAGT
GAGAGTTTCACTTCGAAATGTCACACGCCGCGGATGGACGAAGCGTTGGT
TGTTCATTTGAACGATGAGAAAGTGATCAAAAGAATCGCATTCCCTAGTT
CATCACAAGGTATGAAATTCTTTGTATTTCACAAACTGAGGGGATCAAAA
TAGGAACTAATTGGGGAAGAAGATATCTTTTTTCAAACATTTCCTCATTC
AGTTACATTATAATTTTGTTGCCACATTTAATATCACCTTTTGCCTTTTA
AAACAATTTTTGGTCGACGAAAGAAAGTCGTTTTTCATACTTCATTCGAT
TCATCCTAATCCACACGAGGCAAACATTTTATGAAAGAAAAACAGAACAA
TTAAAGATCAAGCTTAATGTTTCTTTTTCCATTTTCAGTATCAAGAACTA
CCCGTGTCCGGCGAAATATTTTCGGACTCGTTCCCATAAACCGAAAATGC
ACGAAAAGATGTTCGTTTGGTGGTTCCTGCGCCTTCCACCCTCTCACCGG
GCGGCAGTATTGCTCATGCACCCACATATATTGCTCAAAAGAATACGGGC
CAGTGTGTGGCAATGACCAATTCACTTACCCTAACGAATGTACCATGCAG
CATAATTCGTGTTTCAAACAAAGACGTATCACGGTCGCTTATAGAGGGCG
TTGTGGTAAGTAGGAATAATACACCTATTTCCTATTAGCGGATTCATGTA
AAAAAGTCACGAAAAACGTCGAGAAAGTCTCTGATTGGCTGAAATATTGC
ATATACAAGCATATTTTTCAAAATGTCCAGTGTATGAGGTAATTTTTGCA
TGCCTCCGCCAATCAAAAGTTTGTTTACTCGACGTTTTTTCGTGACTTTT
GCATGAATCTGCTAATAGGAAATATGTGTATTGCTTTTTCATCAGTTTGA
GTATGAGAAGAATTTATTCTTCAAGACGGTCATAAGTCACAAGATTCGTC
AACAAAGACCTTTATTTCAAAATACTTCTTCTATTTTACATGTCTGACGG
ACCCATGTTCCCTGCCTAATGATGCGAATCTTAGTATACCAAAACATTTA
ACTCTTTGATCGATCTCACAAGCTGTCCTTCAAAGAACCTTGATGATGGT
GTTTTTAATTGCAAAGTATTTTATTCTTCCTTTTCGTAGACGTCAGAAAT
TGTAAAGATTTGAAAAAGAAGGGATACGCCAAGACAGACGGCCATTACTT
TTTGCATCCAACGCCAAAATGTGACAAAGCCATCAAAGTGTATTGTTACG
ATATGGATTCACCAGAGCCTAAAGACTTTATCACTTTACCGAGTGGTCCT
GAGCATAACATGGCTTACATTTACGAGAAACGAATGGATCTTAGCAAGAA
GTTTGAATGCGAAGGACCAGTCGGTCCCATCGTTTACAGCAAATCTGGAA
GAACTCACTTCTCTAAGGTAAGGGATTTTTTGGATTTTAGTATTTCTATT
TAACCAATTTTCAGCTCTCTAAAACGTTTATAAGTGAACTATTATTAGGT
GAACAAAACGCTGTTAAGAAGCTCATATTTACAGTCAACTCTCTTTAATT
CGAATGTTTCTATAATTCGAACTAAAATCTAATTTGTATAAATTTTTTCG
TCCCTTGAGAATCGAATTAGCTTACATAATATAGAGTCAACTGCATGATG
AAATCGTTATATTAAGCCATGAAACTGCGGCTTCTATTCAATTTTGTTGT
ATATTTTAACGTTACTTTTTTCAAAACTTCAGGTAAGGATCAATCTTGCT
ACGATGACAATCATCCAGGACGATTACACATTTGCGACGAGCGATCGCCA
AGGTTCGCCAGTACCTTTCGCAACAGGTGGTGACTGTTTCTCCGCTAAAC
AAGACGCCAAGTGCAGAAAAGGTTAGAAAGTTTGGATAACAAAAGCGGTC
GGTTTTTAGGAAGTATTGTCGAAAAATTGATACTTTTTCTATTCAGAGGG
GGGGGGTATCTTCTGATTCTATTTTACACAATAGAAATACACAATTCGTG
AAGCGCGGACCTCCATGGCTCGACATAACGATTTCAAGTGGGCTGCTTTT
GCTTGAATTTATGATTTTACGGTCGGACAAGGAACAATTTAGGTAGGAGA
ATGTAATGTCCGATGTTCGACCGATTATTTTAAGCCGTGCGTTTTCAAGT
ATTGTTGCCATTTTGATATCGTTAAAGATGATAAATTTGTTGTGCTTTTG
CTTTAAAATTTATAACTTTTTGGTAAATGTGTAAATTTTGCTCGAAGTAA
TTCTATTATGCAAATAATGCCCGCAATGGCTCTTGAAAAGTTTATTATTA
CTTAACATCTAAGATAACATATACAGTTGAACTCATCTAATTCGAATTCT
CAAGGGACCGAGAATTTTGTTCGAATTACATGAGTTTTTTATGAAAAAGT
CTTTCCCACGTTTACTTTTGAGCTTGATGGACATTAGCGACCGCTTGATT
GGACATACCATCCTCCAAGTCACAGAGAGCTCCATATTTCGTTTTTAAAG
TGACTTCTTTATGTTTTCTTTTTCCCATCTTGTCTTGATAAGAAATGGAA
GGCAAAAAGCAGTGGACGAGCTCGCCAATCGAATGTAATAAAAAAGATAA
CATTCGATTGGCAAACAACGTTGAAAACGTTCGATTGACAAAATGTCGAG
TTTGTCAGCTTCAAAAACTCAAAAAATCCGAAAATTCGAAATACATGATT
AAAATTTCTTGATGGTACTAGAAAATCTGTTTGATTTACATGATTTTTCG
AATTACATGGGTTCGAATTATAGGAGTTTTCTTGTAAGGTTTTCAAGGTA
AATTCTGAGGGGACCACAGAATCTGTTCGAATTAAGTGAGTTTTTGAATT
ATAGGAGTTCGAATTACATGAGTTCAACTGTATTAATAACTTTTTAGGAA
GCTTCAAACTAGACATTAGCAACACTGGCTTCAAGATCAGCAGTAAAGTT
CGTTGGACATTGGAAAGTGATACCAACTCGTTAAAAATACAAGACTACCG
CAACAGTGAAGGTCTTGTGGTGTCCGCTAAGTGTGGTGGCTGGTGTGGCC
ATTGTGTACCTCAACCCAAATTGCAAGTGGAATTACAAAGTTGTAATATT
AAGACTGGTATGTTTTTTCAGATACTTTCTGTTTTACTAAATTCAATTTA
AAGTCTCTCAAGCTGACAGTTCATTTTGAAAAAAAAAGACCAGGATTACT
AAATTCCTATACTATAAGAATGAGAAACCAACAGGAAAAAGAGTGACATG
CGAGTGAAGGTAGAGAGTCTATCACCATATTCCCCTAACAGTCTGCCTGG
ATTCGAACACAGTCTATTACGGTGAAAGTCTGTGATCGAAACCTTCACAC
TATGGCAGAATGTTGGTGAAAAAAAGGTTTGCGATACCCTATTTTGAAGT
AAAAATTTTGCCCCATCCGTTTAATTTCCAAATACATTTACTACTCCCTT
TTATATATTTGACCTTCGTCTTCTCCCATCTTTGTTCAATATTATGTGGA
GATTCTAAACAACTATAACTGTATAAAACTTACTTAAAGAGGAGCTTGAA
ATCTCTCTGGGTTTCGCATTTGATTTAAAAAGTGATTAAACTTTCAAAAA
ACTTTCAATTTTTTTTTCTTTCAGATTCATGTTCAGGCGTGCAATGTCCG
TATTACGGGCAATGCTCTGCCAAAGGGGAGACGTACAAATGTTCATGTCC
AAACAAATGCACCAGAGAAGTGGACCCGGTGTGTGGTAGTGACGGAGTGA
CGTACTCCAATCGGTGTTCCATGAGATATCAATCGTGTGTGGCCAAGAAA
TTCATTGATGTAAAACACCAAGGAAGCTGCGGTAAGTGGATTGTTCTCTT
GCTTATTTTGTTGGTTTTAAGCCAAAGTTGACCACATCTGCGAAGTTCAT
TCTGAAAAAATATGTTTAAGGTTTCAATAAGGGTGGGTTAGAGAATATAA
AGATTTGACCATGGTGCGTTATTGGACCTACCCCGGTGGAGGTCCTATAA
ATTAACCTTTGTCCGTCCGTCCGTTAGTTACCAGCTTTTCTCGAGATTGG
CTCATTAGTTTTTTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNTTTTTAATAACTTTGGAATTCATGACGTAATCATTTA
TTCGCAAATACCCGAAAACAGCAGTTCTTTTTAACCAACTTTTATTGTTT
AAAAGCTATAAGTAGTGGCAAACGCCTGGAGTTTTGGGGTATTTCCGTAA
AAACGTTTCCGTTTTGAAAATCAAGCATGAGTTAAAAACAATGTTAACCC
TTTAGAGGGAAAAAGAGATTTCGTGACGGAGCTTTGACGTTTATGTTTTA
GAATTATCCTTACCTAACCTGCACCTTGTGAACGAAACGACAATCAAGAA
TTCAATTTTTTTTTTCAGGCTCACAAGATTGCAGCGAGACATTAAAATGT
CTTTTCAACTCCAAATGTCAAACCCAGAATGGAGTTTCTCGTTGCAAATG
TTCCACAGTGTGTTCCAACGACATCGAGTTTGTGTGCGGTTCGAACCTTA
AGACATATCAGAACGAATGCTTCTTGAAGATGGACTCGTGTAAAAACCAA
CGATCGATCAGCGTCAAATATCTCGGTGTTTGCAGTAAGTTGCAATATAT
TTCTATCCTTAATCATGGTGTTTTATTACTTGAAGATTTTCACAAAAGTG
ACGGAATTTTCCCGAAGAAGATTTTAATCTACGAAAACCTTAACCCAAAT
AAATTTTCCCCGTTTATGTTTTGAAATTAAATCAAGAAAGGTTTTTAACT
TAAATGTTATCAAGGAAGATCTTGTTGATTATACTTAGTAGTTGAATAAG
TACCTTCGTTGATTAACGGCATATTCTGTAGCTTTTAAATTATGATATTA
ATGTTCTTACCATTTCATTATGCTTCTATCTTTCATTCAGGGTACAGCCA
TTCACAGATCTTTGATTTCGACATTGCGTTTGCCATCGGTGGAAAATCAA
TCGACCGTCAAGTGTTACTTCAACAGCAAAAACAACTCNTTTTTAATAAC
TTTGGAATTCATGACGTAATCATTTATTCGCAAATACCCGAAAACAGCAG
TTCTTTTTAACCAACTTTTATTGTTTAAAAGCTATAAGTAGTGGCAAACG
CCTGGAGTTTTGGGGTATTTCCGTAAAAACGTTTCCGTTTTGAAAATCAA
GCATGAGTTAAAAACAATGTTAACCCTTTAGAGGGAAAAAGAGATTTCGT
GACGGAGCTTTGACGTTTATGTTTTAGAATTATCCTTACCTAACCTGCAC
CTTGTGAACGAAACGACAATCAAGAATTCAATTTTTTTTTTCAGGCTCAC
AAGATTGCAGCGAGACATTAAAATGTCTTTTCAACTCCAAATGTCAAACC
CAGAATGGAGTTTCTCGTTGCAAATGTTCCACAGTGTGTTCCAACGACAT
CGAGTTTGTGTGCGGTTCGAACCTTAAGACATATCAGAACGAATGCTTCT
TGAAGATGGACTCGTGTAAAAACCAACGATCGATCAGCGTCAAATATCTC
GGTGTTTGCAGTAAGTTGCAATATATTTCTATCCTTAATCATGGTGTTTT
ATTACTTGAAGATTTTCACAAAAGTGACGGAATTTTCCCGAAGAAGATTT
TAATCTACGAAAACCTTAACCCAAATAAATTTTCCCCGTTTATGTTTTGA
AATTAAATCAAGAAAGGTTTTTAACTTAAATGTTATCAAGGAAGATCTTG
TTGATTATACTTAGTAGTTGAATAAGTACCTTCGTTGATTAACGGCATAT
TCTGTAGCTTTTAAATTATGATATTAATGTTCTTACCATTTCATTATGCT
TCTATCTTTCATTCAGGGTACAGCCATTCACAGATCTTTGATTTCGACAT
TGCGTTTGCCATCGGTGGAAAATCAATCGACCGTCAAGTGTTACTTCAAC
AGCAAAAACAACTCATGTCTTATTTCCTAGACTCGTTTCGTTTTCCCATT
GAGCAAAACGGAATCAGGCTAGCTTTCCTCACCTATGACGATAGTGTGAA
GATTGTTAAAAATCTCGACCAGAATTTCGTTCTTCCATACGTTCGACGTT
ATCTTGATGAAATGACTTTGGGTGGAGACTCCTCAAAGATTGAAAGATCT
CTCCAAGGAGCAACCAGTTCTATTTTCACCAGAGCGCGTCCTGGTGTTCA
AAAAATCCTTGTCGTTTTTGCTGATGATAGTTCAGATTCTGACTTGAACG
CTATAAGACAAGCAAAAGAACGACTAGCAGATCAAGGCGTTCAAGTGATA
TTGATCTCTTCTGGCAATCGAATGTCCATGTCAATTGCAGCAGCGATCGC
AAGCAGCGGAGATAATTTGATCACTGGGCTGACCTCCAAAAACTTTTTAC
AAAGCTATCAACAGTTCATTGATATCGTTATTAATGGTAAATTTTTTCTT
TTCAAAATGTCGCATCAGTTAGTCATTATGTTCTTATAGTTTTTGGTTTA
ACAGATCATTGAACTATTGATGCTTCATATGCCCCAAACACGCACTCAAT
GAAACATCCACTACGTTACTTTGAAGGAATGGCCGTTTTTGATTCATTAA
ATCATTTTTCAGTTAATTAGTTTGTTTGTTATTTTTCTCCTTAGGTCGAT
GTTCTTTCTTGAAATGTCAATCACCAGAAACGTGCCAGAGCCTCGACATG
ACCAACATCAAATGTGGATGCAACGTGAATTGTCAAAACGCTCTCCAGCC
TGTCTGTTCGTCCACTGGTGTCTCGTATGGAAACCTTTGTTTGATGAAAC
AAGATGCTTGCGTTAACAAGAAGAATATTTTCAAGATCAACGATGGCTTT
TGCAGTAAGTTTTTGCAAACACCAGTACCAGATTCAATTGAGCGTTTTAA
ATCTTCTTTTCTTTGCCCCTCCTCTGTAATACACGTCGTCGAATGTATTC
TGATGGTCGAATGATTACCTAGATTAAGAAGGGAGTATTTCCCTCTTGTT
GTCTTTCTATTACAAACGAAGTCATGCGACAATGGTTAGGTCGTTAAGAT
GGAATTCAAAGCTTTCGTTCAGTAGATTCTCCATAACTCGAACACGCATG
GGGAACACAAAATTGTTCGAGTTATCTATATAGAAATTTTAATTTGTGGA
GTAAGCTTTATAAGGATTAAGGACCTGTTCCAATCAAGGAGACATTCAAA
TTATAGAGGTTGGAGTTAAAGAGTTCTATATACTATATATAAATTCCTTT
AGAAATTAACAAACCAATGGATGTCTTGGTCACCTTCGATACCTCCAACC
AAATGACGTCACAAGACTACGATCGTGTCAAGACATTCTTACGAAACGTC
GGGAAGTCGTATGACGTCGGTAAAGATAAGGCAAGGATCGGGCTCATCAA
TTTCGGCTCACGTCAAAAAGTAGTGTTGGATCTGAATGAAGGAATCAGTG
AAAAGCGAATCGAAGATGCCGTCCAGAAAGTTACAAATATCGGTAAGAGA
ACCTTCTTGAGAGTCTCAAGGTTATTTATTCTTTCTTAGTTGGAAAGGCA
ACTTAAACTCTTTAATTTTGGTGTAGAAAATTTGAAAATGTCGGTCTTTT
AAAAGATGAGGGTATCTTTCAAGAAACACTTACTAATAATATTAGATTAA
TCACGATCCGCTCAGCTATAACTAGCGTTTATATCTTTCTTTCTTTCCAT
CATTCTGCGAGACTCGTCCGTCTTTCAATCTGTGTGGCAAGATTGATAAT
TTCAAAATATCACAGGTAATGTGTATTTCTTCTACCATAATGCTATTTTA
TCTCGATTCTCCTTTATATAGGTGGCAATCGTGACATTCCAAGAGCAATT
CGATTCAGTATCAATCATTTCAGTCAATACCGCAGAGATTCAGTCCCTAA
AGAGTTCATTTTCATTACAAGCAAAACAGATGTCGCAAACTCTGGTGTGT
TGGAGAGATTGTTCACATCGTTCAGTCAGAACAATATCAAGCTGAAGTTC
GGTATACTTGGTAAACCAACCACTCGATTTGTGGACTTCTTGACAAAAGG
ACGGAGCTCTGATCAACTTGTCTCCATTGACGATGATGATGAATCCATCT
TTAAATTCTTTAAACTTTTAAAACCAACCGTCACTGTTGAAGGTACGTAT
ATCTACCCAATTAAATTTTTGTAACATACTTTTTGTATGTTTGACTTGAT
TTAATCACAGAGGTTTAACTTTGAATATTATCTGCGATCCAATGTAAAAC
ATTTACTCTTTGCTGAGATCTTTTTGTGACGATCTAGTTTTTTAGATATT
TCATTTAGAACTGTTAGAACACCACTCTTTAGAACATCATTTTTTCTATG
ACATCTTTAGACAAAATGGACGTCGGCTTCATCTTGACTGGAGATAAAAA
CACATTCCCAAAACAAAGAGATTCCGTTGTTGAGATCATCCGTAGGCTTC
GGATGCAACCAGGAAGTCCGGACATGTCCAATAAAGTTGGGTTCATCGAC
CAAGAAAGGTTTTTTCCACTCACCACTGATAAATCATACATCATAAGAAA
TTTACAAAACTCAAAACCAATATCAGACCCAGATCTCAAGAACCAGTTCG
AGAGAAGCGTACAATTCTTCACACAACAAAATGGTGGACGAAGCAGTGTA
CCTAAAGTCTTATTCGCTTTTGTTGATGATTTGATTTTGAATTATGATGC
TAATAGTATTGCCTCCTCACTGAAGCGACTTTTAGACCAAGGAGTGAAGG
TTGTCTTGTTGCAGAGTGAAAGTAGTTATAGTTTACAGGTCTTACCAACG
TTCATCAAAGATCGATTGGATCGTGTAGATATCAACATTGATGATTTGAG
TGATATCTTGGAGAAAATCCT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00060281	TCONS_00060281	Clytia hemisphaerica	transcript
TCONS_00060280	TCONS_00060280	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00060280-protein	TCONS_00060280-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_339	supercontig	scaffold_339:369181..380851 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.01	0.01	0.01	0.07	0.12	0.05	0.1	0.04	0.07	0.08	0.2	0	0	0.11	0.08	0.15	0.25	0.58	0.19	0.01	0.01	0.43	0.27	0	0.04	0	0.01

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XLOC_037917 (gene) - C. hemisphaerica