XLOC_037852 (gene) - C. hemisphaerica

Overview
NameXLOC_037852
Unique NameXLOC_037852
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_336:200502..206514+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037852 ID=XLOC_037852|Name=XLOC_037852|organism=Clytia hemisphaerica|type=gene|length=6013bp|location=Sequence derived from alignment at scaffold_336:200502..206514+ (Clytia hemisphaerica)
GTGAAAATAAgcacatgctaagaacatttttagacttgaaaataaaaaag ttaagaatattcgaaggcttccaaaataaaaaaagtgtactcaACATAAA TACTCGAAGGGAATAGAAATCAAACAActttgtaaaattttgtttaaaag caCCTACTGTAAATGTGCTGCTGGACGATCTCCACTAGTCCACTTGTCAC TAGACTAgaagtctacttctgactgaacgaACTTTGCTTAAGAAGACAAG AAGATAAACCTAATTCCACacaaaattataaagaaaaattttacatgctt aaaattcttaaaactaaaaacaaaaacaaaaacaaaactaccTCAGCTTT GAAAAAACACGATCCCTAGGTAAtgattttctgactgattttggATTCTA TAATAATCTATAAAATAGTGCATTGCCTGGATATTGCGCCAGCATGGAAC AATTGTGCGAGATATTCTGTCTgtttttcttacaaaaagaaaacaatgtG TAACATGTGTGTAATGTGTAATATGTGTGTAATGTGTAATATGTGTGTAA TGTGTAACATGTGTGTAATGTGTAATATGTGTGTAATGTGTAATATGTGT GTAATGTGTAATATGTGTGTAATGTGTAATATGTGTGTAATGTGTAATAT GTGTGTAATGTGTAATATGTGTGTAATGTGTAATATGTGTGTAATGTGTA ATATGTGTGTAATATGTAATATGTGTGTAATGTGTTATTATGCTCAGCAA TAAAAAGGAACCAACTCAATATAATCCCACACCATCCCTTCTTTCCAGTA ATTATTCTCCGTATCAGAGAACCGTACTAAAACATCTTGATTATCATCTT CCAAAATGATAGGTTCATCCACTACAAAATCAAACCAACCAGACTCTTTA TCATGATTCTTAAATGAACAGCCAGCAGGAAAATCTTCTAAAGGTGTCCC TTCATTAATATATGCTCGAATTTTTTCCCAATCGTTGGTATGAAAATTAA ATGCATTTTCAAAATTGGCATCATTTTTATTGCTCCTCCAACAAGACTTG ATATGAACCATTTCCCCACCATCTCCTGAAGGCCAGTAAANTTATTGCTC CTCCAACAAGACTTAATATAAACCATTTCCCCACCATCTCCTGAAGGCCA GTAAAAATCTTCTCCAAATTTCATCCTCATGACAAACTGATATTCGCCAC GCTTAACCAATTTAAAAGTGTGTTTCATCTCAAGCCAACAGACACTTTTA AGCCTCAAAACATCATGTTGGGTATGTTCATCGAACTCTCTTGAAAAGTA TTCAGGATTTGTTGAGTGAGGGAAAGAATCGACTCCCAAACAAGATACAC GTACTCGATCATTGTATAGCTTTGCAACTTTGTAACCAAGTAGAGGTGAT TGAAACTTTGTCAATTTGTCTTTTATGGACACTTCCTTTGGTGACAAGCA TGTAGTCGATTCAAAAAACTGGCCACCATTCAACACTCTTGTttcacaaa atttgtaaatgctGTCTCTCATTTCTTGGCAGGTGAGAGCAAAAGACAGG AGGTCATTGGGCTTTAAGAAACCAAACAAGTAGAACAAATCGTCAACATT TAGTGCTCCAATTGTAGATCCTTCCATCTGAACTTCAAACCTTGATTTAA GATTTGGTTtcccttttttctattgttttataccATTTATATATACTTTA AAattctaagaaaaaagaaagaaattaattGACACGTTTGACATGTTTTG TTAAGTTTTCAcgacacgtttttttataagaacaaactatataagaacat aaggcttcgatggcaaaaatcttaagaacaagttaagaacatctgaaggc ttcaaaaattttagatgttcttataaaaaaatgtgtattatgGAAGCAAA TTCGAAGTAGCTACACCTACAACCAACAAACAttcgaactttttttttct tcaaaatggcAGAAATAACGTAACTCTATACTTTACTCTGTAGCTAAAAC CTCTATACACGGAAGTAACGAAATTTATACACAGTTTTTAGTACTTGCTA TGAAGTGAAGTACGAAGGACCGAATTTCTAGTTTGCCTCTTATTTTCATT AGCATACGCATACActctttaaaagaacaaatcatATAAAGGACATACGG CTTTGAAGTTCAGAATAAGTTATGAACAATTTACGGGTTCACTGACTCTA AgacacctgatttcttaggaaattgtacAAAAGTATTgtgaaaatttgtg aaaataagaacaacttaagagcatttaggcttaaaattcaaaaagttaag agcattcaAACAtccttaaaaattttgaatgttcttataaaaaatgtata cTTTTTCCTCAATGGTATGACAGCTAGAAAATGttgtaaaatgttgatat aaaaatattgtaataTATTACTAttataacagtacaaaaaagtGAAATCT AAATTACGTGCAAAATTGTGaaataaggcgaaaataaaaaaaatgtagtg tttccggaatgcgggtgaaggaaaaaagttttgatagcttgaacggtcaa cttgattttctttatgatgaaccaaaatcttttttctgaCCCGACCGCAG ACTATGGGCTCATCTatatgatgaaccatatagatgaGCCCATAGTCTGC GGTCAGgtcagaaaaaagatttttttcattcgGCCGGTTTCCAGAATTTT ATTTCTTCTCAAACAATGAAAGCCCTCGCTGGCCCTCGCCCTCAGCTGTT TGCGTGAATAgacaaaattgaattgaaaaaagcttttgacgAAAGTGCAT CTGACCAATGGCTTTATAAATTTAAAAtcgacaaaaaatattttataaat tttcagaaTGAATTATATTGAAATCTAATATTGAAATAATGAAATTGAAG TTAATTAGAAATATATTAAAATTCAATATCAATTagatttatcaaaacaa aatgttcaATCTACAAGAGGGAGCAATTCAATATAATCCCATATTAAACC AGATTTCCACCATGGATTCTCTCTATCAGCAAACCAAACAAGTACTTCAT TTTCATTATCATCCAGGGAAATCAATTCATTCACTACAAAATCAAACCAA CCAGACTCTTTATCATGATTCTTAAATGAACAGCCAgcagaaaaattttc taaaggtGTCCCTTCATTAATATATGCTCGAATTTTTTCCCAATCGTTGG TATGAAAATTAAATGCATTTTCAAAATTGGCATCATTTTTATTGCTCCTC CAACAAGACTTGATATGAACCATTTCCCCACCATCTCCTGAAGGCCAGTA AAAATCTTCTCCAAATTTCATNTTCAAGATACAAATTAgattcatcaaaa caaaatgttcaATCTACAAGAGGACGCAATTCAATATAATCCCATACTAA ACCAGATTTCCACCATGGATTCTCTCTATCAGCAAACCAAACAAGTActt cattttcattattatCCAGGGAAATCAATTCATTCACTACAAAATCAAAC CAACCAGACTCTTTATCGTGATTCTTAAATGAACAGCCATCAGGAAAATC TTCTAAAGGTGTCCCTTCATTGATATATGCTCGAATTTTTTCCCAATCCT TGGTATGAAAATTAAatgcattttcaaaatttgcatCATTTTTATTGCTC CTCCAACAAGACTTAATACGAACCATTTCCCCAGCACCTCCTGAAGGCCA GTAAAAATCTTCTCCAAACTTCATTCTCATAACAAACTGATATTCGCCAC GCTTAACCAGTTTAAAAGTGTGTTTCATCTCAAGCCAACAAACATTTTTA AGCCTCAAAACATCATGTTGGGTATGTTCATCAAACTCTCTTGAAAAGTA TTCAGGATTTGTTGAGTGAGAGAAAGAATCGACTTCTAAACAAGATACAC GTAGTGCTCCAATTGTAGATGTTTCCATTGTTTCGTGGTGCTTTGACTCG TTATTTGGTTTAATCAAATCTTCTATTCTGGTTGAttcaatgttttattt tatttttcattttcttctgaGAAATGGATGCAAAATTTAGTGTCTACAAA AAAATTCACATTAACAAGGAAAAGGTTTGTCAAATTgtcgataatttttt tatgagcttATGAACAAGGAATCCTTCAGAGAGGTAAATATACCTGTTCT TATGAATATTTATGGCTCCTAGCAAAAActaactcgaaaaaaataagaac tgAAATAATACATGAAAACACttattaaacaaaaaaagtaagaacagAAG AAAAGTATAGTCACGATATGggattttttctttacaaaTCTACTTCTACC AAAAtgttacaagatatttttattaatttagaTAAATAAGTTTTTATCAA TATTACAGATGTGCTGTTTAGAGATTTTTGTACAATATTAACTAATCTAT ACTGTTAGATTTAATTTCAACTAGGAAATAAAGGATATTTACTCCTATAA AATCCCTGAAGACTTATAACAGGACCGCAGATAAAAAATCACAGCCCTAT CATTTACCATTTGTCATTATCAACGTTTTTCTAAAtgaggaaaaaaataa agaggACTGTTCATGATTCTATTTGCTAATCtgataaaaccaaaaaaaaa ttaatgcaatgtTTTCTGGGGTTACAAACATTAACAAAAACAGAATGTTA Cttacaaaaacaccaaaataaaaaaaatcagtccctcatagggtaccttt ttggaagaAGTTCGAAAGAAtatggaaaattttgagaacattttggaatt tcagtcccattcaggatcactttttccaaaataatgagtctcacgtaggg tccatttttcaaacttcagCGGCACACCCCTTATcagtcggcaagggtag tacccctcCCCCTCCTGGGGAAGAAACAAATTAGAAGGGTTTTCTTGTCC TCAAATTACACACTCAAATCGTGATTACCATTGTCATTCTTTTGTGTTCT TTTACCAAAACTTTAAATTGTTTATGGCAGACTTCATCCatttaaattgc ttttttattCCTGTAGATTCTTCTTTGTGACCAGCATAAAATGGATTCAA CTCGATATAATCCCAAATAATACCAGATTTCCATGACTTGTTCTCAATAT CCAAAAATTGGGAGAAGACTTCATTTGTATTACTCTTCAAAACAATTGGT TCATCCATTACCAAATCAAACCAACCAGACGCTTTATCATGATTTTGGAA GGAACAGCCGACaggaaaaccatcaaaaacttCTCCATCATCTaaatact ttttaatttttacccAATCACCTGATTTGAATCGAACTTCATTTTCACAA GGAGGTGAATCTTTATTATTTTTCCATGAGGTTCTGAATTTCACTAACTT ATCATCTCCATAATAACTTGGCCAACGaaagttttcaccaaatttcATTC TCATAATATATTTATATCGACCAGGGTTGACATTTTTGAAAGTATGTTTG ATCTCTAGCCAACAGACTGATGTAAGCCTCAAAACGTCATGTTCCAGCAA AGTATCCTGTTCTTTCGAAAAATATGATGGGTTACTAGAATGTGGAAAGA AATCAACATCCGCACATGATATTCGAACACGATCATTGTATAGCTTAGCC AATTTGTAACTTAGCAAAGGTGATTCAAATGTTGTCAATTGATTTTTTAG CTTGATTTCTTTTGGTGAAAGATAATGtgttctttcaaaaaattcatgat TCTTTAATTTCTTGGTttcacaaaatttgtaaatgttGCCTTTCATTTCT TGGCAAGTGAGAGCAAAAGCAAAAAGATCATTTGGGTGCAAAAAACCAAG CATATGAAATAAATCATCTCCATTTAGTGTTCCAATTGTAGAGCTTTCCA TTTTCCTGTTATATGTTTAGTTTCAGTGACTTGATTTTTCAATGTTTCCT GATTAATGAAAAAGAGAGAATTTAGGTTTGAAATATCAAGATTGACCAGA TTTAATCTTTGTTCATTCTTAGGAAAGTAAAGGTGACTTTAGGCCTGACC TGATCAGTCGAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060158TCONS_00060158Clytia hemisphaericatranscript
TCONS_00060159TCONS_00060159Clytia hemisphaericatranscript
TCONS_00060160TCONS_00060160Clytia hemisphaericatranscript
TCONS_00060161TCONS_00060161Clytia hemisphaericatranscript
TCONS_00060162TCONS_00060162Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_336supercontigscaffold_336:200502..206514 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.92 9.5 7.28 7.24 8.54 5.88 5.34 6.36 5.15 4.8 10.2 3.9 7 4.03 2.99 3.35 3.67 2.11 2.96 3.15 4.08 4.6 13.1 12.93 10.01 14.11 10.53 9.03 9.94 10.43