XLOC_037666 (gene) - C. hemisphaerica

Overview
NameXLOC_037666
Unique NameXLOC_037666
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_331:615225..618785-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037666 ID=XLOC_037666|Name=XLOC_037666|organism=Clytia hemisphaerica|type=gene|length=3561bp|location=Sequence derived from alignment at scaffold_331:615225..618785- (Clytia hemisphaerica)
CCAGATTTGAGTAAAGTGTTCGTAAAGAATTTTTACTCGAATCTTGTATC
ATTATATTGTTATCATGAGTGATATAATGGCTAATATGGATATTCATACA
TTGACAGATGATCAGCAAACGATCTTGCAATTGCAAGATACCATTTATTT
TCTGGAAGGAAAACTTTCAGAAAAAGATAAAGAAATTATTCGTCTAAACA
TCGACCTCCGTCGTACGATGGACGTAAGTTGAATAAATTGTTATCTTGCC
GTTGTTTGATGACTTTATAATAATGACTTTGCTACATTTCAAACTAAAGC
ACAAACAGCGTTATTATAGCTTGAAAACTTAAATTTAGCTTAAATTTTCT
AATTACGTTGTTTAGCCAACTTTATTCTACTTGCATAATATTATGTATCA
CTCAACTACATCGGAAAATTCATTACTATATAACTTACTCAATTTATCGT
CATTGGTCCATGTTAATATAAGTTAGCGTCTTCTCTGATTTTTTACCGAC
TCTTATTTTCAGGAGCGTCAACTTTGTCTCCAATTTGAAAATTCTGCTCT
GAGGAGGAAGGCGGCTGAACATAACAAAACCGTCCTTCCTTTGAGGAAAG
AAAACAATGAATTGCGAGCGGAAAACGAGTCTCTCACCAGTACCATTATC
GAACATATGGAGAGAGAAGCAAAACGAGGAAAAGGTAAAGACGCAGCATC
GCAAACTATCGAGGTGCAACCTAAAACAACCTCCAGTGGTTGTCAAACAA
TCGGTGCACAACTTAATACAACCTCCAGTGGTTGTCAAACAATCAACAAT
AAGCAACCCAAGGTTACATCCAGCGGTTGTCAAACAACCAAATTACAACC
CAAAATTTCATCCAGTGGTTGTCAAACGATCAATATGCAACTCAACAAAG
TTACCTCAAGTGGTTGTCAAACTATCAAGCTGCAACCCAAGACAACCTCC
AGCGGTTGTCAAACTATGGAAACACAGCCCAAAACAACCTCCAGTGGTTG
TCAAACGATCAATATGCAACCCAACAAAGTTACCTCCAGTGGTTGTCAAA
CTATCCAGCTGCAACCTAAAACAACCTCCAGTGGTTGTCAAAGAATCAAC
AAGCAACCCAAAGTTACATCCAGTGGTTGTCAAACTATGGAAACACAGCC
TAAAACAACCTCCAGTGGTTGTCAAACAATCAAGACGCAACCCAAAGTTA
CATCCAGTGGTTGTCAAACAATCAACAAGCAACCCAAAATAACCTCCAGT
GGTTGTCAAGCAAATGTTTATTGGTACATCGAGGATAAGAACCCATTGAA
TGTTGGAGGCTTTGGTTTACCTAAGGTATTTAAATAATTTCCACCTCTTA
TCGTATAAGTAGTAATAAAGAATATAATCTACCTCTGGCTAAACTCTGCT
TTTAGACTGCACTTGACAAGGTTACCATTATGGGAAAAATAATACCAAAG
TTTTTGAGTTTTGCGTTGAAAAACATAATTAAGAATGGAAAATCAACAAG
TTTGCAACCCTGTTTGAAATGAAAATCATTATCTTGAATCTTCACGATTG
GATTAAGCAAAACTAAAATTTATGGTACTCAGGTAAGTTATGGCATGTCT
CAAAAACATGAAAATTACCATAATTTTTGGAAAGCATTAGCCGGCAGAAA
ATGAGCAAACTAATGATTTAATACGAAGGGTACCATGATGAAGTTTCCGT
GTAGTGATGTTACCTAATTGTTTACGTCCTCATGTTCTGACGTCAGCAAA
ACTTGTTTCTTAAATAAGTCCAGTTTGGTTAATGGTAGAAACATGAAATT
TGAAATAAAGTTGCACATCATTAAAAGGATCATTTTGCAAAAAAAAGATT
CAAACTTTGCTGTTGTCAGCAGAAATCAGCAAAATACGAAATTTTGCAAA
AAAGTGATGACGTCAGCAAAATTTCACAAAACATAATCTTCACAAAATAT
ATTCCATTGTTCCCTAGATGATAATAAGATTTTTAAATCAAGTTCAAATT
AGGGAGAGCTGAACCAATTTCCTGTATTTCCTACTTTTAGGATCTCAAAA
AGCGATCACGAAAAAGCAAGGACCAAAAGCCAAACAACAACCGTGTTTTT
GGCGGCCCAAAGAAGGGCAATAAAGCTGCTTTCAAACCATCACAAGCGGC
TACAACAAACAAAGGTGGCTTCAGACTTCCTACCGTAAGTATTTCGCCTC
ATCTCACATAATATTGATTGCTCAATTTTTTGGTCCTGTACCAGGACCTG
GGAGCGCCGCAATCCGTACCGCTCTGTTTTTTGATAATATCCGAATAAAA
AACTAAGTCGTTAAGAAAACAAGTACATCTACGCGCATTTGAAATAAAAA
AATCGACAATTTGAAGTTACCGAGTGATGGTATTTATGGTTTAATGAAGA
AATGAATAAATTATTTTTATTACAAATTTCTTTTGGAAATTGTAGGCAGT
GCCTACCAGTCTAAGGACAAAATACATTAACAGTCTTAACTGAAAGTTCT
TACCAGGATTTCTTTAGAAATAATATATCCCGCTCGAAAAGCATTAGTAT
AAACTTTAGTATACACCTTTTCGACCGTAGCCGCCAATTGCCACGCAGGC
ATTTTTTTACGTCGTAACAACCCTAAAACCATGCCAGTTTTTTGCCGCAC
TTATAGACAATAGAAAAAGGTGTATAAAAGGTCGAGTTAGATCGAGTTTA
GGGGGGAGGGTAATTAAATAATAAAGTGGCACGCGCCTGACGGCGCGACT
ACAGTCGAAAAGGTGTATTAAGAAAACAAAGAATAGTCTAAAATACACTT
CGAAAAAAAGGATTCATGTAACATTAATCTTGATTTTTATTTTTAGGACA
TGCGCATGCGCATGTAAACAGGAAGTTCAAACCAAGGGGTAGATGGAGCT
CCGTAGCCCGGGAGGGCAGTCCGTCTGGGAGAGGCTGAATTCCAAAATGA
AACGCAAGGGCGGATGAGGCTCTACAGTCGTGGAAGACAGCTCATCTAGG
AGACGGAGAACTCTGAATTCAAACCTATAAACGTAAAAACATCATCGAAA
GAAGATTCGAAATACAACCAAAACAAGGAAATCGAATACGAAAAGTGTTG
CTTTGACACACCATCATTAATAGCCGACATCCTTGTCTTCCAAAGACATA
CTTATATTAAGCATCAAAGGGCAGGTAGAATAGATTGAAAAATGACGTAA
CACCATGAAGTAGGGCGGTGATCATCAAGCACAAAATCGTATCCAGAAAC
AACAATAAACCAGTTTACAACTCAATAGCAAGACATAAAGAAATACAACA
TCCTGTAAGAAGAGTATTGGCCAAAGAACCTTCACAGAACAACAGAGAGG
TCGAGCTAAGAGATAACGAGGAAGAATGACCATTGCCAACTTAGTATCTT
TTAGTTCAGCAGAATGAAATACTCCATCACTTCAAGACTCTCTATTGACT
ATAAAAAAGCCAACACAACATCAAGTTAAACTTATTTCAGTCGATACTAT
ATAACATCTAAGCTGTTCGAACAGACTGTTAAAAAATGATATAACATAAT
CTGGATTGTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059900TCONS_00059900Clytia hemisphaericatranscript
TCONS_00059899TCONS_00059899Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059900-proteinTCONS_00059900-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:615225..618785 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.48	0.26	0.69	0.69	0.97	0.66	0.78	1.34	0.39	0.99	0.13	0.28	0.52	0.47	0.05	0.04	0.06	0.11	0.36	0.23	0.32	0.03	0.07	0.07	0.64	1.17	0.03	0	0	0