XLOC_037621 (gene) - C. hemisphaerica

Overview
NameXLOC_037621
Unique NameXLOC_037621
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_331:444839..452599+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037621 ID=XLOC_037621|Name=XLOC_037621|organism=Clytia hemisphaerica|type=gene|length=7761bp|location=Sequence derived from alignment at scaffold_331:444839..452599+ (Clytia hemisphaerica)
CCGGCGCGCCAATTCCCGCCTTACTCTCTTAACAAATCTGGGATAAATTC GGTTTCTAAATCGGgattttaaaatgaaagctTTCAAAGATGGTGGCGAA AGTCGTGGAAAGTGACTGAgcaatttttttgtgtttttctatATTTAAAA GAAGGTAAGATTCTTCGCTATTCTGCCCTTCCATTTCGTCCCTGTGTATC TAAAGTCCTTATTTTCGTTGCAATCGGCAGCAGAGAGATTAAATCAGCTT TTATGATGGCGCGCCCCTGCCCTCCCTGGACCAGTTGAACGACTGCACCA atgataatttttcttctttaatttcccaattctttttcttctttttactc TTAGCTGGAGAAAATTAAGGACCGTCCCGGCGCTCCTGAAACTTCTGGAG TTTTCCCGAGCAACTTAAAAACACTATTTCTCTCTCCAGAAAGTTATGGA GCCCTTCCAGTGCTTCTGGTAATCTGGATCATATCAAGTGATTTTTATCA GTTTCTAAAATATATACcgtttaaaacatccaaaagttATTTGTCCCCAG GTTTTATGGAGACTTTGGTCAAATAAAATACTTTGAGGATGATGGTTCAg ccaatgaaattgaatttgtcacattagttaggggtcagtcacaaatcgat tctaggttagaagaacgtcaattgacgttttaaaagctgacccacccacc cacacccaaaaacgtcaaacacctTGATATCCCCGAAAACCGATAAAAAC TGCCTTCATtgctgtttcgtcagccatcttgattttcactacggctcgca tagtttataaatttgaaaaaaaaaaaaacggagataatttctaaacttgt tcacaaaattcccgtaattaattatctccgtagtatatgtagcgacagaa agaacggccatctgcaaaaattcaagggccgttcgggccgtcaaacaaag aaaagacataaacatcgggccgtgttttggttttcaaaacaaacgaagTG ATAAAACAAACATGGCGAgaagtaatatttggcatggagaatgaaaaatc gatgtttctgaaaaacgtcaacaacctttaacccacccacccatatacgt caattgacgttcttctaacttaaaatcgatttgtgactgaccccttaggg tgcgcactcgtcaggattttttgcgtggaacaagtcaaaaatgaaaatta gaaCTTTCCATCCATAataacttatccttaacaactccaaacttattgat tcttttgttttaaatactcagaatttatcagagaaaacaaagaaaaaaac tccatcccattacctaccttcaataaaTACCATTTATTAGACATCAAGGT TAAAAAATGGCGACTCGGAATTCGTGGCACCACCGTCGAGCTTGACCACC TTTTTTCAAATAGctatcgctattgagctggattagttatagactcacgg ttttttttataaaacgcgggaaagatagtactttagtttgtcacgTGTGG TGGTAGCCTTTTCGATAATCTATATATGGTCCGTctttaaatcgagaaaa aagaagaaatttctattttttggcactttcctgaaatttttatcaggacT ACCATATATATCGTTAGAAAGCTaagggtttcagcttttcattggtaaaa tttgtttttagctatcatttccagctcatttaGCGATAGACTAAAGTTTA ACAGCCATCAGCATcaggccgattttcagaccgcgccagcaaaactcctc acgccCCGCCACGCGGAAGGCTATAATTCACCTGCCATCTTTATGTTTTT CGGTGCTGTCCAAAGGTCATTTCTTGGTTGCGCGTGGTAGGGAGACGATT CCttgaaaaggtggtttttttgtggtttgaaaattgaataacttttgaac tactgaaccaattttaacaaatgacccctcatttttctcacaaaggtaag gactttcaaataaaattagtttggttttcaaaatttgaggggaaaatttt ggcctgaccaCCCTACATAAGTGGGTGGCGTACGATATTTCAGAATTGCG GAAATTGACCCTAATTTCTTCGGAATTTCAGAAATTGAggaaaattcctt cggtatttcggaactCTGAAATTGTTCCGGTAtcagaaatccatgaattt ttgcctCCAAGTTTCGgttattataaagtttttagccCCCTTTTTTGGAG GAATTCATAcataaaaaatttggaaaattagtcaaaacgaggaaaaatac ctaaaaaatCGGTATATATCGggattgcaagtatttttttacggaatttc tgaaattttggctaaattatttcggaaatcgcaaacctcGTACGTCCCCC CACATTAGCTATATTTGAAAGTATCACTGGTCAAAATATTGAAACTACCA TGAGtaggctaattttttttaaataaacgcGTGCGCAGTCCAGTTAGCGG TGCAGACCGCCAATCACCGAAAATCCGGAGCGCCAGGAGCAGGAGGGTCT TGAAAATTATCGATTGAAATTTCTTTCAGACGGGAGTTCACTGGTGTTCT CTGCGGGgttggcttttttcaactttgCCAAATCCTCAAACCATGCTTAT GGTTTTTGGTTTTTGGTAGAACTTAGAACTTAGCGGGCTGCAGCCAGATA ATTtaacaataaaagtttttggaatttacaaaaaatcttttgtttaatTG TCAATTGGATGACAGTGCCTACAAGGTCCTTTTACAGAAGTATATAGTCG ACGAGTATCGTCAACTGCTATTGGGCATGGGActactatctgacaaaaca tgggggTGAATTGCACCAAATCTGTACCATGGGTTTGTAAACAAGACAAA CTGCCTTCAAATTGCCATAGAAGTAGATGTGTTAGGTATTAGTAGAACTT GAGTTGTTGTGGACATAGTACTGCGGCAGAAGGTATCAGTCAGGActaaa gttatttttgatacTTTGTTTCGTCTTTGAAATATTAGCAAAAATCTGTG ACGGACGGGACTCACGCATATGGGCCTGTCTTCTATCCCCTTAATTTCAT ATTAGACTTTCTAGATTCTTGTCAATTTTATGTATAAGAGTGTTATTCTA TAATGGaagtaatttgaaaattttcagctaATTTCTTGAACCAAACTTga gttataactgaaaatgtgtGACGGACGGGacactatttttttgttttcaa aggtAAATTTGGCACAAGATGCTTATTTGATCAAGAATTCTGTATGTTCT GAGGatgcatttttgtattttgagtaTTCTCCTATCAAGGTGTGACCAAT TAGTGCAGAAAACTGTTAAGATTTTGATTAAGTTTTTCCTCTAAGTAGCT ttgaacaccaaattttgctctgaaaacatcaaaattgtGTCCCGTCCATC ACACGTTTTCAGTTATAACTCAAGTTTGGTTCAAGAAAATGGCTTGTAAT TTGCAAATCATATACTTCCATTATAGAGTAACATTTTTACATAAAATTAA CAAGAATTTAGAAAGTCTAATTAAAAATTGAGTGGTAGGAAGACAGGCAT ATGCGTGACGGACCGGACCGTCACAGATTTTAACTATTATTTCAAagaca aaacaaaatataaaaaaattacttaGTCCTGACTGATACTTTCTGCTACA ACAGTACTAAATTCACAAAAACTTAAGCTCTATTACCTAATGTATCCCAT TCTATGGTAATTTGAATACAGTTTGCCTTGTTTACAAAACCACGGTACAG ATTTGGCGCAATTCACCCATGGGACAGCAAtcaatttgtattaaaaaata cacgatttctctttcgcaccaagtaggttttttaattcaaaatatgaaaa aaatccgtagtggagtACATGCAAATATCTGGaatgaagaagaccaaatt agtagCAAAACGATGAGAGCGTTTGGCGTCACTCttgcggcaagttacac actcgttatttgttaatcccattgcatcgggcgataggcggttaggcgga aggagttctctaattctccgatcagcgtccggtcattttgaatgaaaaca aaaaagttaaaaagggcgcgctttcatgaaagttatcgtgacatgttatg acagaaagtatgattgataaacttggtggagttatcgaaaaaaatttgtt gtcaaagagatttaacagtaagtgaaaacacaggccagatatcaacagcc CCATGTTTTGatcaatcgtcccaagttagagcagttgacggtagtctGTT TCCCCAAGGCCAAAATATCTTTCTCCCCAGAGATGGATAGCTTTTATTTT TACCAGAAAATTTGGGAAACAAATAAAGATTTCAAGGAGATGGCAtactg taacttggtctaatgttgacatctcGCATCTTTTTATCAgttgaaattga tagaaaggtcaaaggtatttttctttgcttagtggtcaagGGATACTTTT TAATACTTTTTCAATCAGGATCCTCCCGACGCTCTGTAAACTTCCGGAGT TTTCCGGAGcagctaaaaaaaaaaaaaatttttctattcGGAAAGTTCCA AAGCTCTTCTGGTGCTTCcggagcaagtgatttttaacttgttctaaaaa actgtttaaaggtttatataaaaaactatcagatattttaataaaatact TATAAGTCTGGTTGAGGATGATGTTGTTaatgaaattaaatttgtcACAT TATATTCAAAAGCATCACTaatcgaaaaaatttaaaatgtgaCGTTTCAC GACACTACCATTTTGATTATCATTAGGAAAGAAAGGAGCCTTTTAAGAAA TTTGTTTATTATTGTTATCCAAACAACAttaattggaaaactttttgttt tgttttgaaagtggcagtctatggagagtcttcatttgataaaaacgcgg gAATATTTTATGTCTACCCAGAGATTTCAATATACCGGtttcctttgtta tttcaaTCCGGAGCTAGAAACTTAGTATTGGAGCTGATTGGAGCTGTCAA GTTGAAGACCGCGGGCATGCcccttgaatgttttgattgcaatgTAAAGT CTTCTAGTTTTTTTCTCCGTgtctggaatgttttgatcgcaatgtagagt cttctttttcttactttcaattttgttggtcgcagactggacgtctAATT TCCAaactgattgcatcaacttttttatcaatatttcagacgAAGGAAAC TGTATTgtgatttttatagaaatgctttctaacatactcatCGTTTTGGA CAACTAATTTTGGAGTGGCAGTTGAAGCATTTTTTCTTAggaagcttttt tgtccacaggtagccattttttatttttttttgaaaaacacagttttttg tgtgcttccgtgcaaagttggatctttcaGATTCTACTCGTtcttttcta gaattttttttgcacagtaccggaaataggtcaaggcagataacTACCGA AAGAGATTCTCTAGAGCTTTGTTAAtggtatgacttttctgggttcaaag acgttcggtcgccGACTAGACCGGTcaccaactgggcaggggactctagg CTCAAAAAGCAAAACGTTTTCTCAAGAAAACACAAAAGTTTTGTAACAGA TTTAAATAATATACAGCAAAGAGGAACAAACGCTCTCATATATTAGTATg tacagggctgcaaataagcgtcTGTCATCGctcaatgtccgactgaaaaa gctatttgacagactgaaaatcttttgtgtcggtcatgatgtccgaatga aaaaaggaataaaccattaacttgagttgaaaataaatctcttgcacccc tgtctcttacttagcctattcttttaatactcaCTTCCTTTTtagctttc agggtgtttctaagttaacttttatcaaattgctttcttcgtaactttca agagtgtttctaagctCACTTTTATCGGCTTGCTTACTTCATTACTTTCA AGAGTagttctaagatcacttttatgtgtttcaaagttaacttttatcga ctcacTTTCTTTGTAACTTCCAAGGGAAGATCACTTTTATTTTACCTAct cgctttctccgtaactttcAATGACCaacaggattttgagtttgaccaaC AGGATTTCATTTttgtcggacatgatgtccaattgactgaaaatatttat ttgcagccctgagTGTATAATATTTTGTAAGCTTAAAAGCATTTGATATA CTGATTTGAAAGAAGGAGggaattgaaaaagaatgtcaAGGAACCAAGCA AAACACACAAATAAGTTAAGTATTTCTgcgtaaaaagaaaaatcaagtga gtttttttttgtcaCTCGCATTTCCACACAATACTATTCTTTTTGGCCTG TAGAGAAATAATAacataaagtttttttaaatagtcAACAAAGGTCAAGC TCAATAAGTTTGTATGTTGAAAATGGCAACACTTCGTAACCTTCAccaat caataaaatcaaagatttcAATACAACAATTTAAGCGACAGTTGAGTGTC ACTGTGTACTGTCATCAAGAATTTTTGCGGACTTCTATCAAAGATGATGA GAAGGGAATCAGGAGAATCACACTAGATGATACAAAGAAAAGGAATGCGC TATCGCTTGCAATGCTTGATGAATTGAAACAGCATTTACAAGATGTAAAT ATGAACGAATCAGTGAAAGTGGTTGTCCTCTGTCACACTGGATCTGTGTT TTCTGCTGGTCATGATCTAAAAGAATTGTTAGATGAAACAGGATCAAAGT TCCACTCACAGATTTTCAATCGATGTACTGAAGTTATGAATCTTGTCCAG GATATTGATGTACCAGTTATTGCAGAAGTTAGAGGTGTGGCAACTGCTGC AGGATGTCAATTGGTTGCCACTTGTGATTTAGCTATTTGTTCTGATACTT CAAAATTTGCTGTTCCAGGAGTTCTGATTGGTTTATTCTGTTCTACACCT GCTGTTGCTCTTGCACGCGCAGTGAACAGAAAACAAGCTTTAAAGATGTT GCTCACAGGTGATCCAATCAATGCAAAGGAAGCATTAGATTGTGGTTTGG TCAACAAAACAGTCCCCATTGAAGATGTTGAAAAAACCACACAGGAACTA GCAGAGAGAATCACACGACACAGTTCTCGTGTCATCGGTCTTGGCAAAAA GACTTTTTATCAGCAAATCAAAGAGAACAGAGATGAAGCCTATTGTATTA CAGGTAATGTAATGGTTGATAATCTTACCTATGAAGATGCACAAGAAGGG ATCCGGGCTTTCTTTGAGAAGCGCCAGCCTGAAtggcaaaataacaaata aCACAACACTGGAACATGCATAGATACAGCTTTATTAAATTATAATGTAA AATATCCTAACTCCTGATTGGCTTTGTAACAACAATGCAAGTAAAAAGTC AGTGCAAATCTAGATTAATTCACATTATCTGTAATTTTACTGATGGTTTA TTTGAAAAAGGTCTTTATAATTTTGTTATTTAGATAAaactcaaattgtt cttaaaatttatttttgatgggTATTAATTACATTTGGATCCTCTGGAAG ATGATTGGAAagttggaaaatatattttccctCTCACATCTAAGACTAAG TAAAGAAGGTTATcgataataaataaatttaaaaggCTTTGTGAGAAAAA TCCTAACGGTTCATCTCcgatatattttattgtttgtaGAACTTTTTTAC ATCATAaatctttttatcaaacaattttattttgtagaTAGAGTTTTTTC AGACaattttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059798TCONS_00059798Clytia hemisphaericatranscript
TCONS_00059799TCONS_00059799Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059798-proteinTCONS_00059798-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:444839..452599 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ECHDC3enoyl-CoA hydratase domain-containing protein 3, mitochondrial precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.45 2.99 3.12 3.03 53.27 39.09 19.74 22.68 20.88 17.15 18.26 14.73 10.97 10.53 18.72 21.93 21.8 19.08 7.45 8.48 12.02 10.13 13 14.96 12.71 14.3 17.37 12.67 21.09 16.5