XLOC_037546 (gene) - C. hemisphaerica

Overview
NameXLOC_037546
Unique NameXLOC_037546
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_330:110200..113757+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037546 ID=XLOC_037546|Name=XLOC_037546|organism=Clytia hemisphaerica|type=gene|length=3558bp|location=Sequence derived from alignment at scaffold_330:110200..113757+ (Clytia hemisphaerica)
TCTACTCAAATGGTTGAAGTAACTGTAGAATGAGTGCTCTCCCCCGGAAA
GTCTGTAAATCGTGTGTACTTCTGCAAAAAACTTTGCCACCTATAAAATA
GATCACAAAAATGAACGGCAAGCACATTCAACTATCCATCACTGAAGAAG
AAAACCAACACAAGGGAACAACTTCCACGAAGAAACACAACAATTAGAAT
CATGAAGACTTTCATCGTGTTAATGTTCATTGGCATGGCAACAGCCTGGG
TCAAAGAGATGGAAAGTAAGGCATCACACATTCAAACACTTCAGATCCTT
CATCACCAGAACTTTTTTGCTTGATTTACTTTAAGTTGCCCGCATCCCTG
ATATAGTTTAATCATAACAAAACCTTTCAGATAGGATACTAGCAGTCTAG
TTCGTCTACATGTGATATTTAAAGTCTTATTTCCTAGATAAGGTTTTAAA
GAATTCTGTTAAAAGTAGTTTTTCCTTATAACGATTGTCTGAATCAGAAC
GCATACTTAACAACATTATCAAAGTTCACAGAAGAAATAATGTAAAATAA
CACAAACCGATAATCCCATCTCTTTCAGACTCAGCTTTGTACCAAGGAGA
CATCCTTCTCGATCCCGATGAGGACGAGCGTGGTTTGAACGCTACCAACA
AGAACACGTTTGCCAGTATTCGTGGTGGAAGGTGGCCAGGAGCGAGAGTC
CCATTCATCTTACACAGAAGTTTGAGTCAAGCAGGTGTGAATGCAATTTA
CGCTGCTATTAATGACTTTCACAAATACACCTGTCTTCGATTCCAAAAAC
GGACCAACGAACCATCATATATCCTCTTTTTCAAAGGCGACGGGTAAGTT
GTAGTACAGTAACTTTGTGGAAGTAGCCTAAATCAAATAGAAATGTACTA
AGCTCACAACTGCTAATatcttcaaaacattttttaacgtATCTTCTACC
ATTGGCTTACAcaacattttaaaacaaaaagacaaactACTTCCCTCCCT
TTTGGTACTGCGCGAGCACAAATTTTGAGAGATTCTTTTgttaattctgc
tttgtcagcatagaggtGCGCCTCCTCTCGATATCACAAAAACGAataag
tactagtaatcgtatggttaggagtgcaattaacgattaatcacgagtaa
caaaggagaaaatagtaatttgcacgagtccgaaggacgagtgcaaatta
cggtattttctcctttgttacgagtaatcgtcagtaaataatcattagta
aatcatagtttttttagaaaaaggggaaatttttgacattcgaaTTGCAA
TGCAACTTATGTACACAAAGcgaatttctttgttcttttttatattaaag
aaaaaaatgtctttgttttttattatatagtaaaaaaagtctctgacaca
ggacttgggagagaaaagaataaggggacaaaagggtccccccgccgaag
agtgcaaaaagaggtaatagtgcaattaacgattaatcgcactcctctaa
accaatcagattcgagtaattttgcacggctgacgattataTCTTTAATC
GTCCTTTTTCGTTCTCCATACTTTAAAATCTCAATCTTAGGCAAAAACTA
TGAATCTGCATAATAAGCGCTGCAAAATCTGTTCTTCCTTTAGATGCTTT
TCACCAGTAGGATACCGTTATGGACGTCAAAACGATGTTTCCATTGGCTA
CGGATGCGAATCTAAAGGAACTGCCATCCATGAAATCGGTCACTCCATTG
GTAAGTGAGGAGTTTCTTTTTCTTGAGAATTGCATGCTTTGAAAATTCAT
TTAACACGCTCAATAAAGGGCAGGCAACGTCATGTCTCTCATCTCTTCAG
AGCTCAAAACCATTTTTTCTAGAGTAGACTCAAAGTTGATCAAAGAGTCA
TAGGTTTCATCAAATTGGAACATCACTCAACCAACAACATTCGTTTTACG
GAGAGAGAATTTAAACGAGTGTTCAAACGTTTTATACATCAATCCAGTGA
GCTTTCTCAACCTCTCAAAATTCTTCCTTGACAGCCTTTGAATTTACCCT
TAGGAACCCTCTCAACCTCTCAAAATTCTTCATTaacagtttttgacttt
ttcgccCTTAGGACTTCATCACGAGCAGAACCGACCAGACCGTGACAACT
TTATTAGTATCAACTGGAACAACATCGAACGGTCCATGCAGTACAACTTC
AACAAACAACCTGCACACAACATCGACTCAAAAGGTTGAACCCTCACTTG
TCATAAAGTTTTACAGGGGTTTTACTACTAAGCCAATGGCATCATAGTGA
GACAAAATTAAAACCTAATCTATCAGCCCAGAGCCAGAGAGGAACCAACC
ATATAACAATGAGTCTCATGCAACCCACTTAACGATTCATAAATCCCAGA
AAATTTACGCCAACAAACAATCTACTCACAACATCGCCACCATCACCTTC
TTAGCCAAATATTAAAATCACCTTCTTAGCCAAATATTAAAATCACCTTC
TTAGCCAAATATTAAAGGCTACTGAATAGTTTGAATGTAATTTGTTACTG
CTCATTTTTCATCAGACTACCCCNTTTACCCTTAGGAATCCTCTCAACCT
CTCAAAATTCTCCCTTGACAGCCTTTGAATTTACCCTTAGGAATCCTCTC
AACCTCACAAAATTCTTCCTTgacagtttttgactttttcgccCTTAGGA
CTTCATCACGAGCAGAACCGACCAGACCGTGACAACTTTATTAGTATCAA
CTGGAACAACATCGAACGGTCCATGCAGTACAACTTCAACAAACAACCTG
CACACAACATCGACTCAAAAGGTTGAACCCTCACTTGTCATAAAGTTTTA
CAGGGGTTTTACTACTAAGCCAATGGCATCATAGTGAGACAAAATTAAAA
CCTAATCTATCAGCCCAGAGCCAGAGAGGAACCAACCATATAACAATGAG
TCTCATGCAACCCACTTAACGATTCATAAATCCCAGAAAATTTACGCCAA
CAAACAATCTACTCACAACATCGCCACCATCACCTTCTTAGCCAAATATT
AAAATCACCTTCTTAGCCAAATATTAAAATCACCTTCTTAGCCAAATATT
AAAGGCTACTGAATAGTTTGAATGTAATTTGTTACTGCTCATTTTTCATC
AGACTACCCCACATTAACCAGTCCTCATTATAATCATCCAACAATATTCG
TTCCCTTTAGGCACTGGTTATGATTACTACTCCATCATGCATTACGACAA
AGGAGCATTCGCTATGCGATATGGTAAAATCACCATGGTAACCAGAGATC
CAAACATGCAAAATGTCATTGGTCGTGGCAACGGGTTCAGCAAAACTGAT
GTTATCCAAATCAATAGAATGTACTGCAAATAATTTTTACCTACAAAGGA
AAATTACTAATTCGAGATACAACACTGGTTATgtcgtaaaaaaaaacaat
agttTCCACTGATCCGCTTGTAATGTTTGAATAAGCTTAAATAGTGTTTG
AAAGAAACTTATAAAACGAGAACATTTTGTGCTTTTTATTTCCTGGCTTA
CTTCTCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059666TCONS_00059666Clytia hemisphaericatranscript
TCONS_00059667TCONS_00059667Clytia hemisphaericatranscript
TCONS_00059668TCONS_00059668Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059668-proteinTCONS_00059668-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:110200..113757 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.04	0	0	0.04	0.15	0.24	0.17	0.45	1.68	0.5	3.23	3.57	3.47	2.5	0.89	0.82	481	645.39	4.16	2.51	914.65	974.37	916.85	918.13	0.43	0.12	0.83	2.86