XLOC_037404 (gene) - C. hemisphaerica

Overview
NameXLOC_037404
Unique NameXLOC_037404
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_327:404504..415268+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037404 ID=XLOC_037404|Name=XLOC_037404|organism=Clytia hemisphaerica|type=gene|length=10765bp|location=Sequence derived from alignment at scaffold_327:404504..415268+ (Clytia hemisphaerica)
AGAAATCCTTGTATCAAAATGTTTTATCTTATCCGCTAATTAACTTTAAC TGTAATCTCTTCaaatatgtttattttttcactcttagttgaaaaatgaa aaacatataaaaatgataaatgatTAATTGTAACAAAAAATGTGAAAACC CTTAATGATATGATTGAAGGGTGTATAAAACCCCCTGATGGCTGAGTCAT GGAAGAGAAAGACCAATGGAAGTGTCTTCAAAAATACACTCTACAAGCAA TGGGGTATCATCAACACTTGGGACTGTTATTCAGTCTCCAAGGCTAGTAA GAACTTAATACAACGGTTAAAACGGCACAAAGTATTAGATGACCACACTG GTTGTGTCAACACAGTTTCTTGGAGTGATTCTGGATCTTTGCTTCTTAGT GGTTCTGACGATTACTCTCTCAACATCTACGATAGCTACAGTACACAATT GGTACATTCCATCAAGTCTGGACATACAGCTAATATctttagtgcaaaat ttctaCCATGTACTTCAGACACAAAGGTTACTTTATATCTTTCTACTTGA ATAATTGAGATAGACAACAACATTGATTTGTCAAACATTtttgataagca cttattcaaATGCAGAAACATCTTCTTCGTTCTTCTTTCAGCTTCTTTCT CactgaaaactgaaaattttaccTTCAAATTTATTAAGCtcctttcattt tattttcttattcagATAGTTTCATGTGCTGGAGATGGTATGCTTCAATA TAACATCATTGGTACCGAGTATGGTCAGAATCCTTTCAACTGTCACTCAG GAACGACTTATGAGGTATCTGATTTTTTGGATACAAACTCATTTCATGTT ATTAAATCAAAGAGAAAGCAAGAGTTCAAGACCCAACCTATGAAGTGTTT ATTTGCTCTTTTTTCATTTAGGAAAAAGAATGCTTTTTGATTTCATATTT AAACCAGTTTGGCCCAAAGAAGTAGATTTAGAATAGCATCCGGGTCATTG CCTAAATTAATGTGAATCGctgggaatttgaatttttactaaTTTCAGTC AGGAACCtctatttatattttattataagGTACTAGTTACACCAGGTGAT CCAAACTCGTTTCTCTCTTGTGGTGAAGATGGTACAGTACGTTTATTTGA TCTCAGGACTAAAACTAAATGTAACTGCCAAGAATGCGCAGAGGTGAGTA TTTTTGACTCTGTTTGACTcaaaaaaaatatggaaaaggGGTCAGATAAT TCGCTTGGTCAACATTTTCCTAGTTTCCTAGACGCTTAAAAATAGTATGA CCAAATTTACTTAAACACGAAGGAAATGAGAATTATAACTTGCGGTTATG GCTGTGAAGACACTTTTACTGGTGATGTCAGCCTAGGGACATAATGTCCC TCCAAAAAAACAAGAGTTAAAACATTTTATTCTTAGACATAAAATGAGAA ACTATAGCTAATATAGTTAATAGCTTTAACAATCAACTCTCTTTTTATAC CAGGATATTTTGATTGATGCAAAGCATGCAGTGACTTCAGTCAGCATCAA CCCGATGCTACCATATCATTTAGCTATTGGATGCAAAGATAGCTTTGTAC GTGTCTTTGACAGGAGAACGTTAGGCACTAGCCTGGATACAAGAAGTGTG AACAGGAATAGAGGCTGGATGCCTGGATTGTTTTGCAAATTCAAACCGTC GACTTTCAAACAAGATTCGAATTGTAGAGTCACGTCATTGCAATACAGGT AAGTCGTTGATATTTATTTTAATCAgaactttaaaattttctttcttaaa acCTTTTTGTGGGCTTCCGAGGTAGTGCCTTGGAATAATGTCATCTTTCT TTGTCTTCAGTTTGACAgcacaaaaaactaaaattcttCTACCTTCTTGA GAATTATCATCAAGTTGAAATTggaattttaagcattttttctGCATTTC TTTAATTACAGTAATGATGGTAACGACTTATTGGTCAGCTATTGCAGTGA TTATATCTACCTCTTCACTGTCCGTGAAGAATCTTCAAAAGTGGATCAAG TCTCCACAAATCACCAAGAAGAACTAACAGATCCCAGTGAATCACTTACT GATAAACTACCACCTGCTAAACGACTTAGACTACGCGGTGATTGGTCAGA TACAGGACCCAATGCCAGACCAGATACAGATGAGGAGGATTCACCAGAAC AAAACATTATGCAGAGAATGTCAGAATTCTTCTCCAGATGGATCGAAGGT GCAATGTCCTCAACCGTGAGGCATGCATCGACTTCAAGTGAAGATAGTGA TGTAGCCCAGCCCACGCCTGGAAGTAGCATGCCCATACCTGGATCTAGTA TGTCCACACCTGGAAGTAGCATGTCCACACCTGTTGGAAGCCACTCGCAA TCACACCAGGAAGAAGAATCAGTGATTTCGAATCAACGAGATGAACCTTT TAGCGGGGCACTACCCACTGAAGATGGAGTTATCATCAGCCGAACCCTTC CATCTTTTCCTGAAGAAGCAAATCCAAATACTCACTTAGGTGAAATAGCT GCAGAGGAACCAATATCAATGGAAAATCCATCAAATTCTGCAGACACCAC TAATGGTTCCAAGACCAATACTACAAATGAAACCAGTATCACCCAGGATA AATATACTGAAGGGCCAGATGAGCACACTCCTCTACTAAACAATAATCGT CCCTTAGACCTTCCATCATCTTCAAGAGACTATCTTCACCATTCTTATCA GACCACGAATACATCATCTGACATATCAGACTCGGCTGCAAATCCTCTAG ATTCTGCCATTGCTGTAGGTTCTTCAAGTATCTCACCACTATACCCTGAT AGTACAACTCTTGATAGATCAACATCTTCAAGCGAACATCACCAACAGCC TTGTCATCGTTTCCTTGCAGTTGCTGGTCGTTCAGATTCAACCGACCACG ACGAAGAAGAATCACCAACAACACCAGCCTCAGATACTTCAGAATCAACA TCATCAGCAACTTCATCCCATTCTGAATTACCAACAGACACCACAACCAC CTTGGCCACCAACGAATCCGAAGACGAATTTGAACTCGATGAAGCTTTTA GAGAGAGATTACGTGATGCATATGCATCGGGTACTAGATACACTATGGAA CGTCAGCACGCAGCCTCGAAGATCCAATCTTTTATAAGGATTCATAGAGA GAAACAGAAAGAAATTGAGAGAGCGAATGCAAGAAAACCGAATCATATGT ACACACCTAAAGAAAAGATTATGTACAGAGGCCATCGCAATGCAAGAACG ATGGTGAGTGCTAGTTTTATTGTGCTCTATATTCTCGAAAATTTCCAAAA cgctttaaccctattagccccaagcttatTTGACTTTCGTATCCccaggg ggtagaatctaccaccctcgattattttcgatctagaagagctatggtca taaaatttggtacagatgttctccatcatgatacaattttccaggaagaa aaaaataattgatgacgtcattcaaaaaccgatgacgtcatcacaaaatt tccacccgtcggaaaaaagcccaaatatatggtttacaaaNCAGAGAATG TCAGAATTCTTCTCCAGATGGATCGAAGGTGCAATGTCCTCAACCGTGAG GCATGCATCGACTTCAAGTGAAGATAGTGATGTAGCCCAGCCCACGCCTG GAAGTAGCATGCCCATACCTGGAGCTAGTATGCCCACACCTGGAAGTAGC ATGTCCACACCTGTTGGAAGCCACTCGCAATCACACCAGGAAGAAGAATC AGCGATTTCGAATCAACGAGATGAACCTTTTAGCGGGGCACTACCCACTG AAGATGGAGATATCATCAGCCGAACCCTTCCATCTTTTCCTGAAGAAGCA AATCCAAATACTCACTTAGGTGAAATAGTTGCAGAGGAACCAATATCAAT GGAAAATCCCTCAAATTCTGCAGACACCACTAATGGTTCCAAGACCAATA CTACAACTGAAACCAGTATCACCCAGGATAAATATACTGAAGGGCCAGAT GAGCACACTCCTCTACTAAACAATAATCGTCCCTTAGACCTTCCATCATC TTCAAGAGACTATCTTCACCATTCTTATCAGACCACGAATACATCATCTG ACATATCAGACTCGGCTGCAAATCCTCTAGATTCTGCCATTGCTGTAGGT TCTTCAAGTATCTCACCACTATACCCTGATAGTACAACTCTTGATAGATC AACATCTTCAAGCGAACATCACCAACAGCCTTGTCATCGTTTCCTTGCAG TTGCTGGTCGTTCAGATTCAACCGACCACGACGAAGAAGAATCACCAACA ACACCAGCCTCAGATACTTCAGAATCAACATCATCAGCAACTTCATCCCA TTCTGAATTACCAACAGACACCACAACCACCTTGGCCACCAACGAATCCG AAGACGAATTTGAACTCGATGAAGCTTTTAGAGAGAGATTACGTGATGCA TATGCATCGGGTACTAGATACACTATGGAACGTCAGCACGCAGCCTCGAA GATCCAATCTTTTATAAGGATTCATAGAGAGAAACAGAAAGAAATTGAGA GAGCGAATGCAAGAAAACCGAATCATATGTACACACCTAAAGAAAAGATT ATGTACAGAGGCCATCGCAATGCAAGAACGATGGTGAGTGCTAGTTTTAT TGTGCTCTATATTCTCGACAATTTCCAAAAcgctttaaccctattagccc caagcttatTTGACTTTCGTATCCccagggggtagaatctaccaccctcg attattttcgatctagaagagctatggtcataaaatttggtacagatgtt ctccatcatgatacaattttccaggaagaaaaaaataattgatgacgtca ttcaaaaaccgatgacgtcatcacaaaatttccacccgtcggaaaaaagc ccaaatatatggtttacaaatgtgtctattacagtcgaaccaataaagat atttaaattctgtttgaagattctgaaagataaaaggctgttctttaaca taattgccggttttacAATTTCCATTaagatttttccttaaaatctatgc ttcaagatttttccttaaaatctatgctgaagatgagtgaaattttcaaa atttgatgacgtcataaatgatgatcattttcaaaaaaattcctttgact ttttaaattgatattatcaatgcctatcacgtgtaaaaatttgaaaatga tttaatgaatagtttagaagttatcagcactttaaaattttgagttttaa gcgattttaactgggttttatgtcaagtttcacaataaagtcataaaacc tgatctggacaacctatgacccttaaattttgcacaagtactctggTTAA CGGATGACACTTTTTTCATGGTTGTTAAAAGTGATGGCAGAGTTAACGGG CTACGTTGTTAGATGTACATTTTGATTAACtttggaatttaaaagaaaga gaGGGGAAACAGTCAAACCCATTTTCAAAATGTAATTTATACAATTAGAT CGTGCAATTATGAAATGTAGTTTCAAATTTTGGTCTTTGCcttcaattta tttttaaaagatttttaaaacttttataattacgcacggagcgagcgtta gcgagcggagtgcgactcttttggcaaacgcatgcgcgtaagcaaaattt acaaaatttcaatgataTGCGGGCCCTAAAAATGGAAATTCCcctttttt ttcgtctagccgctattccgCCGTGTTTAGCCTCTGGATggttcaacttt gaaaatttcgtgaaaattagcgttttttaagaagaagtcgttgcagtgtc aatctttcggaaatttaaaaacccaatttcccgtggaaaaaattgacgtt ttttgtttttttgggacccttggggcataaggtacctcttgaccgcaaaa atttcaaaattcgcgaattgaccgttgacagcattaggggtaaaggggaC CCACTGACGTCacgggtttgggaaaaacttcaaaatgcgatatcttcagt ttgaagaagagtggagaggtcgttgacccctcattttatcgggaatttta tggggaatgagatgggagggtttataaggcttgagtaggactttcaaatt tggctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcatcaaaacaaaaa aaatgcgataactcgagattggaaaggaattgggaggtcgttgacccctc attctatcgggaattttatggggaatgagatgggaaggtttataaggctt gattacgattttcaaatttggctaaatctttagccattttcagttgatga cgtcatcaaaacaaaaaatgtgataactcgagattggaaaggagtttgga aATGGCTAAACCCTCTTTGGATCGGGAAATTTATCGAGAATGCAACGAGA GAGGGGTGTTATGAGGCCTTAGGgcgactttaaataaaaattggttaacA TTTGGATAAGCagcgtgagaaaatcaaaacaaagcagccgaaaagaactg aactctcggaataaataatggaaaaacataaaaaaactattttttgatga gctcttattccattctttccaaaaagtcagtgaaattaaaactgatgaaa tatacagaaattattacaaaactactcgacacacacgtgacacgacccaa agcaaataaattcagcTTTCGGCATTTTCGTTCGTTTTATCGGGAAAACC AAACAGTTCTTTTCATCAATGTatgcataaaaacttgaaattctttaata cttgtcaagaatatattttccataacaaaacCAGGGAAATGTCTTTGATT AAACCAGGTGTAacgagggatttttgtaaaaaatctctCGTGTCTCTCCC AATCTTCCACAAAACTGTGTCTTTCTTTTGACTTTTTaccatcaattctt caacaatcaacatTTCTTACTTCGAAAATTCGACACGTTTACAGCTTGAC GATAATTAAAAGTTCGCCCCAATTAGTTTTTGTtgtaaaaatgttgtttc agaccATTCATAGCTTAAACCAGCATGCATTTTCTCATCTATGCATTGAA ACAGAAACAtcgaaaagtgttatcaatctgatagagaaacgcaataatga agaatttcttctcaatcgaaaaaatataatacatcttctttttctgtgta tAGTAATGTATAACCCtttcacatctctgaaaaagctgctgcatttattt tgaagcttagggatcgaaaaatttttctttactttgaTGTTTATATCTTC GGCGGGAACTTGTCgaatttttttgttcgaatctaacaagattttcgaac aaaaacattcgaaattatagAGACCCGggattcccgagttatttttttcc gagttacgaaaaaactGAGTTATCCCgagcgatgacgtcatttttggaat aaagtgacgtcattttacattttataactcggtttattttgcttccttta actttccaagttatttttcattttgtaactcgggatttttgcttccttta gctttcgagctattttttattttttaactcgggaaattgtgcttccttta actatccgagttatttttcctttttcaactcgggaatttttgcttccatT TAACTTTCTGTAAGTAGATTTACGTTACACTGATTGGCCTCATAAAAAGG CTcgactcgtaaaatatttctcgtattgcactcaaagtTTTAGGGCCAAA GCAAATAACGTCATCGTCACAAGATTCgcagtattttgagttttgatccg ttttaagttgtaatttttagatttatggaattttagattttcgttcggaa tttctttgtgatttgggattttcgggaaaaaagtacgatattcttttgag cagcggATTGATAGCCTCCACCTATTCTTATATAACTAGTGGGCTCTAAa gaatccctttcgctttgcgaacacgagactcgttctccgtgcgtaacccc ttttacgattgattttTACTGAAACATTTCTCTTCTTGTTTGATATTTTC AGATCAAAGAGGCAAACTTTTGGGGTGATGATTTCGTACTTAGCGGTAGT GATTGCGGCCGCGTGTTTATTTGGGACCGACATACAGCTGAACTTGTAAT GCTATTAGAGGGTGATCGGCACGTGGTCAATTGTGTACAGCCACACCCCT TTGATCCTGGTATGTTGTCATATTTATACTTGCTGCCACGTTGCGGAATA TTTCAAGGTTTTAGCTCCCCTAGTAATTAAGTTAAGACTTTGAAGCCAAT CGTAGCATCAAGGTAGAACAACCGGCTACAGTGTGCAAACTTCCTATTAA TATTTTAAACCCATTAAATTTTTTGAGTACTTCCACATTCTGGAAGCTTT ACCAAATATCTTTTTCGAATCAACAGAGATGATTTGAGTGATGAAAACAA GTTCAATTCAATACTGAAAGTTTCATATaagtttttataatattttttgt atttgcATTGTCTAATATTAGACCATAAGTCCCCATGAAATGGAATAATA CCTTTTTTGTTTGGAAAGTTCCAGCTCCCAgctatttcaagaaaaaaaaa attttatatttcagTTCTTGCTACCAGTGGCATAGACCACGATATCAAGA TCTGGGCTCCTCTCGCGGAAAAACCTGCCACACTGGATCATGCCGAAGAT GTGAGTCCTTTTACATTTGATGGCTTTCAATAATTCTTGATTGACTCAGA TATTAGATCAGGAAAACTTAGGTTTCCTTTGGTTTTCATAAACCAATTAT ATACTCTAATGTTAGCTATGTTTTATCCAATTATTTTTAGCCTGAATCGT TCCTAGAAAAATTTATCGTTCGAGGATTAAGCACAATCCTAAAGTTATCT TTGTCCTGAAATACCTTCCCACGAGCTTATACAGTCTCTCTCTCTGTATT ATAGATCATGAAACGAAACGAGCGTATGTTGGAGGATTCAAGAGATACCA TCACTGTCCCTGCTGCTTTCGTTTTGAGAATGTTCGCCTCACTCGGCAGT ATTAGAAGAAGTAAGTCGATATCGTTTCCTCTTTAACTGAGATGCGTCTT TCAAAAAAGAATATTAATTTCCCGGTTATGAAGTGAATTCAAGTGAATAA GGAACCTGGTGGAACATGTAATTTACTTCGGTTTTACATTTGCACCCCTC ACATGGCACatccagtttgcagagtatggcaaTGCTGCACTCGAGGAAAA ATTCGGAAATACCAAGTTCCGCACTGGAAGAAcgcacctgataaattttg gtccggACAAGGTGCACCTATTCCTCTGAAATTCGCCCAGaaaggcaaaa aattgctaaaattagctgAACTTGAGGAAAAAATAACTGAACTCTGCACT TAAGGTTAAAAAACTGTCCGAACTTAcacctgaaaacctcaaattttgca cNCACTTGAGGAAAAAATAGCTGAACTCTGCACTTGAGGTTAAAAAACTG TCCGAACTTAcacctgaaaacctcaaattttgcacctTTTACCACCTTCG ACTTTTTCAGAGTTGTGCAATCGAGATCTCGAGCAAATGTGCCACACTCT GCAAACTGACTCACATCTACCTTACATCTACCTGCTTTCTACAATTatgt tttcatattttcatttttgttgtgACTTTTTTATTTGACCTTGATAGGCT TTAATGACGGAAGGGATGGGACAAAGTTCCTTCTTATTTCCCATCGTACA TTCTGGTAATAATAATTCTACACTTGTGatgatgaaatgaaataaaCTGT GAAAGTGTaaatatgtaattttttttctttcttcagatCGCAGGCGTATG ACGGAGGAAGACCACGAAGAAGACCAATCGAGTGATTGAATGGAATAGTG ATCGATTgaatgaacgaatgaatgaatgaatagttttgagtgaaaaaaat gaaagaataaaatatgaaaatgtttgaataaGTGGAAAGAGTGGAAAAAC ATACCGCTTAACCTATGAAAAGAGAGAAAACTAAGATTGATTTCAACAAC ACTCGTAATTGGGACCCAAGTGTTTACCAAAAGATTGAAATATGCACTAT ACTTGTGTGGTTTTTGCTAAGAACAAATTGAGAATGAAGTTACGTGTAAA TCATAGTAGTTTGACAGATTTTTTAGCCTTTATTATTCTAATTAGAAAAC AATCATCGATTCAATAATTCAGGAAGGTTCTACTAAGAAATAAGATTTTA AGATATTTACTAAATTTTATCTATATATCTCAAAATAGCCCTCGAAATTT GTCTGTTTAAATAAGAAGGTATTTAGTAGCTTTTTCTTAGAACGGCATAA GTTTCTACCAGCTAACTTTTAAGCAAGAATTTGTATTATAATGTTGATTG TTATGttcttttttgtaaataaacatTATCATTAGCCCTTTAATTTGCTA AAGGAATAAAGTCAAATTATTAAAACTCGAAAAATAATGATAAGTTACTT TTCTATTTGTTTATAAAAGTGACTTTTCACCATCAGTGACGATGTCCTAT AAATAGTGCCAAATCTCGAATACTTTTCGATTTCGAAATTTTGCTATTTG GGacgagagaaaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059418TCONS_00059418Clytia hemisphaericatranscript
TCONS_00059419TCONS_00059419Clytia hemisphaericatranscript
TCONS_00059420TCONS_00059420Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059418-proteinTCONS_00059418-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:404504..415268 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DCAF6DDB1- and CUL4-associated factor 6 isoform c Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
68.92 67.02 104.46 104.88 20.66 15.86 31.74 31.76 36.96 33.79 40.74 33.83 35.79 35.23 23.2 31.09 43.41 47.55 27.16 37.85 50.94 49.74 33.6 39.47 64.83 63.31 30.18 24.98 29.2 28.69