XLOC_037360 (gene) - C. hemisphaerica

Overview
NameXLOC_037360
Unique NameXLOC_037360
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_326:384814..391345+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037360 ID=XLOC_037360|Name=XLOC_037360|organism=Clytia hemisphaerica|type=gene|length=6532bp|location=Sequence derived from alignment at scaffold_326:384814..391345+ (Clytia hemisphaerica)
agatTGCAAGGAatagtttgaggattctgctgcacaaaggaagttctata gaagtttgtttttggttgtttttttcaagttcaaagacgcTCGTTCGCGT GCACTGGGGCTGTTCGTGCACTGGCGAACTGACTCTAAGCTCAAAAGCTA AAAACAATAAATAAGAAAAGATTACCTTTTTCCAGAGCCTACTAGGTAAG TATTGGTTCCCTGCAATGTCATATGTCCAGGATTACATCCTAAAACTCGT ATCACAAGTGGTGAAAGTTGTTCAAGTTTTGGAAGTTTCGCTAGCATTTT GGCCGccatcttttttgttttggtttgactGACAAACTTTACGGAACCGA CAAAAATGTACATAGCGACCTCGACTTTATTTACATTCGAAAAAAGATGG CTACCGTGGAAAGTGagttttgatctttttcttcacatttttacaatatt tttatttaaccTATTTTGGTAATTCTTAAAATATGCTTATCATTACAAGA GCAGAAGATCAAGAAAATAGTTTTTGTTTCCTCTCATTCAATTTGCTTTC AATACATGTCAGTAGctatatattttgttttgtttagtttattgtctttt tttgataatttcatGGTTTTTCCAATGATGAAGGTCAGGCCATGAAGAAC GCTTTTCTTGAACATCCGCCAATATTCCTGATTTAGAAATGTGTACGAGA ATTTTCACTAGCTTGCCTGCTTACATTagttgcaaagtttcaaaattgaa ttgATGGCACGCATtctgacagttacatcaatatgccttcttacctgtct ttaaaaatataaataaaagtaatcacggaaaaggacgcgaaaaaaaaaga cataaNNNNNNNNAACAATATAtctctttaattttttaatttacagTAGA AGTATCCCTTACTTGTAATAAATTCACTTTAAATGGTGACATTCCTTGTT AAAacttatttgattttttatctCTATAACATAGACCTTTTAGAGATATA ACTGTCTATGATTTCACCCATGTACGCTCTCTGAGCATTTCTCACACAAT TCTACATTACAAATATCTGCTCTTTATACAGATCTagcaaattttacaat aaatttactaAACACATTAAAATCCTCAAAggaataaaataacaaaataa aagatggttacagaacaataaaaaaacaattaactATGTATATACAATAA ACGAGTTAAAGTATAAAAGTATTCTCTTTGATATTTACAAATAAACTTAT GCACAGCGGCAGTAacacatatgcaagtttacacaaagattaaaaataca acaaagcatcttataaagaaatattataatcattaaaagatttagaacaa taaaagatggaatttctaaaattcaaaaagaaatatttacagaacaacaa aagccttttagaaatttgttctttaaagacatgccattaaaaaaatcCAC ACACACAAAAGCGCAACACGTTAGTAAAAGCCGCTGTAAATCagggggtt cagatcaatgttttgatttcatcattTGACAGTTCTATTcgcaggagaat aatttaccatcagctaatgttatggttttttgaagtgcttgttctaagag atgagcgaaaataattatttttagttttcaataaagcaaatttaatcttt cttatacaagattacactttaatataatgccaattttGTATGTAtataag ttttatattaatactttctttttgcataggctttgcatattttcaatgca atctcactacggcaatttggccaccataatttttgcatacaattcaatat gtcggatggaaaggcgaaaagtgTTAAGGCAGTTAAACTTAATATTCAAC AACATTTGCAAacatttgaatgttttttacaaaaatgttaCTATTTTACA TTTCTAgaatatttaacaaaaatgtTTGTAGTTGTAGATGTTCTGGTCTA AGCTGGCCTTAAGTAATTTCTCCTTTTACATTTTCAGGGATAAATCGAAT CGATACTCTCTCAAAGTCAAAGCCGATACCAGCAGGTTTCATTGATGACA AGTAAgttctttttccctaaaatacCTATATGATTTTAAGCCACCATAAT TTCGGATATCCTGGATTTTTTGCCCATGGCAACTTTAGGCACCAAAATGG GTGTCGAGTATGTGCCCTCGTGTCCCTTTTCTACACCCTGCAAACTCTCT CAAAGGGGTGCAAAAAACCATAACACAATAGAGTCTCAAAACGTAAATGC AAAtcttttcgaaattcagtctctaaaagattgattttcaaactttggct TGACATACCTGTCATCTCGCGAACCCCCTCCCTTGGACTCTAATTTAATc tgaaaatcatgaattttcactCTGCAATTtcagaaaactatttttataaa agaaaggcAATGGAAatattaaaaagatattcagaaTTAAACAACTAGGC GAAGCAAACATATATCTCTGTATTTTAACTATTAAGAGGTCCTAAGACTT ATTATCTATACAGTTTGGTAAAAATTATGATATTGTATAGGAATAAAAGT ATACAAACTTTAGCACCAAGATAGGACACAAAAAAATTAGCTTAAATTTG TATCCAGATAAACCGTTGTTCTTTAGTGAAAGATGAATAAATCTAATAAA TATATGTTATAGTAATTAGTAATTCGATAGACCGTTGTGATCACCTAAAT AACTATAAGAGGGTCTATCTACCTATTCCGGATCAAAACTGTGAATATCA AAAACACCAACtatcaaaacaataacacacTGGTACatataaataaacaa aattatacaataaatattttttatgagatgtaacttttttacaaaataga aaGGTCCTGAATTactcatttattttttcattttattcctATCACTGAAA AAATTAGGTtctcaacattagaccaacttacagtatcatatttttttgtt tatttttgtttcaggaGATCAGTTTATTGTGATAACCGCAAGCTAAAAGA TTGGACCAGTGGGGATCTAAATACAAAGTTTGGtaaattgttttttgatt tcaatCAGATAATTGATAAGATCTGCAacaataaacttaactaagccTTT ATATGCATATTCAACGCTGGTACCacatgttgttttttatttatttgatt aatTTTCCAAGCAATATGGAAATTTGTCGCCAAAGCCGTTTTGACTATCT AGTTTTAAGATTTCCTTAAAGCCAATCTATACATAATGAAACTGAGTGCT GATGTTACATAAGCAATACATgctggtctccacttgcgcgcgcttcgatc gcactttttcgagcaacggttgaaaaaagttgaagtgtgttcaacttttt tttcgagcgcgcgctacatttttatgacgtaatcttttttccaagcaaaa aggatagaccttttcacaaattacgtcacgaacatcacttgcctcttatt caaacaattaccatggtgattatgtcccttgagacattaaaggATTTTTT ACTGAATAGAAGGTAGTTGTAATAAAACCCGCTGGGAGTTAAtaaccatg gcaataattttaaaacgaggcaagtgatgttcgtgacgtaatttatgaaa aggtctattgaagccaaaaagtgcgatcgcagcgcgcgcaagtggagacc ggccttacgaaatgtttctttttttccatCAGAAATATAGACCATTAGTC GCCATTTCTAATCATCACTGTCTCAAGTCAAAGTGTTCTTAATTAATAGA CTGTATATCATGTAATTTTAAAAGACAAATTTTAGAAGACATTTTAAAGA CTCGTTGTCAAATAGAGCAATCAACTGACGAAACGTGCgctcttcttttc ttttgatgGTTCATTTTAACAACTGCGATGTTTTTGCAAGCTCAgtattt ttttggacctacctccgggtgccccggtggaggttctataaattaaccca tgtccgttcgtctgttcgtctgttcgtccNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttccattct gaatttttgtacaattattgtcacttttttcttattttcatctgatgtta atcattaggtaggtccattcagcatgttgcttgttttcatTGCAATACAG ACCTCACCATTTATCAATCAATCCGGCTTTAATCTATTTTCTTACTTTCA TCTATTTTACACAGCTCTATCAGAAAGACTTGAACAACTTGTCCAGCCCA AACCAAGGCACAAAGAATGGATGGGAGATaggtatatattttttcatttt cgttcgCTTTTTAATAGTAGTAATAGGTGGTAAACCAGAAGCGACGAAAT AAGAAAAGCTTTACAGTCTGATCCAGGCTTGCTTAATTGGGGCCTTATTT TTTGCTGAAAGCTAAAAATAATAGAATTAATTTATTCGTTTTtagctaaa aaaaattcattcttaATTATACTTGGACTAATTATTTTTTAGTAGTAAAT TTTCTCCAGAGACACTAGCTAGTAAGTAAATGGAagtaaaaaaatggaaa tgggTATGTAGTTCGCTTaggaaattattttgaaaatccaacgtgttttc taaaaataatagcgttctttttcattttcttaataGACCAACACCGATCT GGCTCGTTAGCCAAGGTGCTAAAAGTGCCAATGCATCAGGCCGTGTCCAA TCGCTTGCAGAACCAAAACGACATCACAGAGATTTTGAGCCGAGTAAACC AGTCTATTCGATAGTGAGCAACGCGGCTAAAAGTGCAAGTGCTAATGAAC GTATCGAGACTCTAGCAAAGGCTAAATCGTATCAGGAATTACCCATTAAG CCGGATAGTTGTTGGGATTATAGTGAATGGAATTCGGATGTTTCCAAAGC GGCTTTAAAACACAATGCAACTGATAGAACTCAACAGCTTTCAAATCCGA AATCTTTACACCGCACGTATAAAGAAAGTAGACCGGTCATATGGCAGGTA CCGCACGCTGCACGGAAAGCGTTACCAAGCATACGCGTTCAACAATTATC AAGACCGAAAAGCAGGTCACAGTATAAAGAAGATTACGATAGCACTTGCT GGAAAGTTTCTACTAGCGCCAAGAATGCACGCCCTTCGCCCCGTATTGAA GAGCTATCCGCCCCGATACCTAGAAAGATTAAACAAAAACGAGGTGGTGC TGCGCCTAAAAATTAATCTAAATCAactgtaaaatattttatttttctaa ccAAAATCCTAATTTTATATATGTCATCCTTTTaaatcatcttcattttt ataccTTTTTTAATAATCAAAAAATATGGTGATCATTTTGCTTGTAAGTA TAGATAAATAAATATTACCCTCTGATTATTATAGCCTTATTgttaaaaaa cacaaaaattcaaCGGCAAAACCGCTTTagtt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059345TCONS_00059345Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059345-proteinTCONS_00059345-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_326supercontigscaffold_326:384814..391345 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.4 9.28 6.82 5.93 89.51 66.44 32.83 33.56 21.67 26.18 20.83 20.45 6.86 8.18 1.73 2.94 7.29 5.82 14.26 8.26 7.31 6.86 10.96 10.72 90.25 53.45 25.49 30.31 6.03 6.19