XLOC_037066 (gene) - C. hemisphaerica

Overview
NameXLOC_037066
Unique NameXLOC_037066
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_314:390964..395768+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037066 ID=XLOC_037066|Name=XLOC_037066|organism=Clytia hemisphaerica|type=gene|length=4805bp|location=Sequence derived from alignment at scaffold_314:390964..395768+ (Clytia hemisphaerica)
CATCacggaaccaatagctcattggttgtaagtgacgtaaaatcagtcaa aacgtcactttcaaccaatcagctattgggtggaatggaagacattgcaa tggtgcatatcatgaatatcttAAATCGCAGACTAGTGCAATGATTAACC AATTAATCTTTTTTAACCCTCTGAAGGTATGAACCACAGAAAAATGAATG GCAAATGGTTTGCAGTATGAACAAACGTAGATGTGGCGTTGGTGTATCAG TTCTAGATGAATTACTTTATGCTGTTGGAGGACATGATGGTTCAAGCTAT CTCAACTCTGTTGAAAGATATGACCCCAAAACAAACCAGTGGAGCTCTGA CGTTTCCCCAACAAGCACTTGTCGTACAAGTGTAGGCGTTGCTGTTCTTG ATGGGTAAGATgctcaatttattttttatgatattttacaTGTAtgtatt attttaaaaatatttgaccTTCTGCATTCCTTTTAATTGAGAAATTCCTT TAATCAAATTTAGAATTGGAAACATATCTATCAAGCATAATAatagggtg gggcgtcaaatgtcaaagtcagaaaattcaagatgtagtgtttttttatg aaaatttaacctattgtgaggcattctgcgcaattctTAAggtcaaaagt tcaaaattggccgaacccccctgggggtactgattcgcactacaggcaat aattggaaaaaatggcattttctggccgtttcaggcctgtaaatatgtca aaactattgcaaatcttatttttttcacttgctgtactaaattttatgaa gaaacaacaaaataatcatattggtttgaaaattgtacccattggagccc taaacgagccgttttaagccaaatttgggtagcaaaatgctttttaaggc caattttgcaagctcataaactttaaactaattgattcacatatctgaaa ttttcagagatggaagtcttcaataaagtctttaagcaaaatgaatttca agtttttcacttttttcaataaatcataatggcgtcttcaaaaatcgctt tttagcaaaaaaaaatcatatttctcaaaaaatagcattttttaaggcaa gcttctacaaactgagtttaaatgctNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAgtac tccaggaaaatcaaaatcatttgggtttaggatttgggtatatccgccat tatggaattgaaatctgtgctaaaactggctaaattgcaacatttaaagc aaaaatcccatattgacttaaaaactgctctaatatggcaatagacatga acctaaaatctttttgcagtgatagtattctgtaaATACTCTAGGGGTAA AAACTATTCAGGTATAAGATGCTTCTGGACTGaagccagttttaaaatgt atataatatttcaagctaaaattcatctttttttgaCGGAACAAGTCTTG AAAATGGAAATGTAAGTGGGCTATAAAAGAATTGTTGAGTGAAAtgggat tttttaaataatttatttcaactagtatttctaaattaaaggaTTGTAAA TTCACACTCTTTGCTTAatataatatacaaaatatttagtcaattatgat gtattttaacagagatttcatttccataagggtggatgtaaacaaatctc agactgaaatgattttgtttttccaggaatattcacagaatactatcact tcataaaaatttgggtccatgtctattgtcattttagagcagtttttatt caaaaacggggtttttgcttgaaacgttgtattttagccagttttaacac atatttcaattccataatggcggatatacccaaatcctaaacccNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNatttccagaagactatcactgcaaaaagattttaggttcatgtctatt gccatttttaagattttttgagtcaaaaattggatttttgattgaaatat tgcgttttaacAGGAATTTctattccaaaatggtggatatacccaaatcc caagcccagatgactttgattttcctgtagtatttccagaatactatcac tgcaagaaagtttggacccatgtctattgacattttagagattttttcag tccaaatttgggtttttgcctgaaaaatggctcttagcaggaatttaatt tccataatggcagacgtAGAcacatcccagacccaaatgattttgatttc cctggagtatctccagtatactatcactgcaaaaaaaaaatcagtcagca tttaaactcagtttgtagaagcttgccttaaaaaatgctattttttgaga aatatgacttttttttgctaaaaagcgatttttgaagacgccaNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCtatattgaagacttccatctctgaaaa tttcagacatgtgaatcaatcagtttaaagtttatgagcttgcaaaattg gccttaaaaagcattttgctacccaaatttggcttaaaacggctcgtata gggctccaatgggcacaattttcaaaccaatatgattattttgtcgtttc ttcataaaatttagtacagcaagtgaaaaaaataagatttgcaatagttt tgacatatttacaggcctgaaacggccagaaaatgccattttttccaatt tttgcctgtagtgcgaatcagtacccccaggggggttcggccaattttga acttttgaccTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNcgcagaatgcctcacaataggttaa attttcataaaaaaacactacatcttgaattttctgactttgccccaaaa atgactgttgacgccctaccctaaTAATAATTCTTATTTTATAAAGCTTA ATTTCATTTCTTGATAGTTATTTGTATGCAGTTGGTGGGCAAGATGGTGT ATCTTGTTTGAATATTGTTGAACGCTACGATTCCAAAGCTAATTCTTGGT CACGTGTCACTCCAATGAGCTGTAGGCGTCTAGGTATGTTTTGATGTGTA GAATTGGTGTAGTTTTTATCGATTTCCAATCagtaaaaattataattgtt aTTGATGTTATAAGggtatttaaatattttgaatattttcaaatttttga atttttagataTATTGAGGTATGTTAGCTATCATCCTTTTAGCTTTTCAT TCACTGTTCGATAGTTTTCAATTCAGAGAACTAttcttctttttgatttt caggGGTTGCGGTGTCAGTATTGGATGGATATCTATATGCGATTGGTGGA TCAGACGGAACATCGCCTTTAGCTTCAGTTGAAAGGTTTGATCCAGCAAC TAGTACCTGGACATCAGCCAAACAAATGGGAACCAAACGTAAACATTTAG GTGCTGCTGTTTACCAAGGATGTATATATGCTGGTAAGAACAATCTTGAA AGTATGATCTTAAGATGCACCTGTCTTGTAACACTATTCGTTATTTCTAA TACAAAATAAAGACTGTTTTCTAAGCTAATGTGTTGCTTCTTTCTAACTT AAAATCAGTATTATATACTAGGTGGTGAATCCCTTAACTTTGTGTGCAAC ATGGGCTGTCCAAAGTACTCATTAACCATGTctgtttgttattatttttt atgattttaattttttccatttattCTAGTTGGTGGTAGAGATGATGCTA CAGAGTTGAGCAGTGCTGAGAAATATGACGCAAAAAGTAACACTTGGATT CCAGTTGTGGCGCTGAACTCGAGAAGAAGTGGTGTTGGTTTATCAGTAGT TAATGGACAATTAATTGCAGTGGGTGGTTTTGATGGTACAACCTATTTGA AATCCATCGAAATTTACGACCCTACTGGGAAACAGTGGAAATTGCAATGT GGTATGAATTACAGGAGGCTTGGAGGAGGTGTTGGAGTTGTGACGCTGCA CCAATCTGAAGGTTATACGTGGGGTTATTTTCAAGCAGGTTGTATACAGT AAATGCATCACATCCAACAGCATTTTCGGAGTTAGAAAATTTATTGTTAC ATTAAGAATTGCttttgtatttaatttttcagttcaGAAAGCTCGACGAC TTCATAAAAGAAAAACCAATTTTAGGATCTTAGAATTCCAAAAAGTGTGA TTTCTGTACTGAAGTTTCAAATTAATAAAGTTGGTATAAAACTGATACCT TGTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058828TCONS_00058828Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058828-proteinTCONS_00058828-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:390964..395768 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
KLHDC8APREDICTED: kelch domain-containing protein 8A isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.64 27.11 8.73 4.37 25.94 18.16 14.46 17.27 9.49 12.54 11.69 5.88 7.79 7.43 6.2 10.11 13.66 10.19 6.3 5.37 8.21 7.39 31.25 26.82 11.91 14.2 11.73 9.56 24.45 23.92