XLOC_036880 (gene) - C. hemisphaerica

Overview
NameXLOC_036880
Unique NameXLOC_036880
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:863221..873448-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036880 ID=XLOC_036880|Name=XLOC_036880|organism=Clytia hemisphaerica|type=gene|length=10228bp|location=Sequence derived from alignment at scaffold_311:863221..873448- (Clytia hemisphaerica)
AGTCTTTAGAGTAAAAAAATACAAATCGATAACAGAATAAAATGAAATTT
TTGCAGCTTCTACCATTGTAACCTACAATAATGGTCGGGGTATCAACATT
GAAGAAAGTTGCAATTTATGGTGGTGTATTTACTGTTGCTTCCTGTTCAT
TCTTCTACTACAAAATACAAAGTAAGTTTATTTCAATACATTTTGCTTGA
TGATGCTTGGTTTCGTACTTAGTCTCCTTTATATCCTGCATTAGTAAGAT
TCTAGCAATTTCATTGGTCAAAAGACATCACGTGGAGGTGGGTTATATAC
TGTGTCTATCTTCCTCGCATTCGATTGAAAAAAAGAAGACATTGCATATT
GACGAATGCTCTTTCGAATGTTTTGTTTTGAAAAGACAGAAAACTCGGCA
AGCCTCACCAATACGGTTTTCGATGACCCTGTATATCCCGTATCCCATCT
CGAGAAGACTGTGTAACTAATATTATTCTCAACTTCAGGGGCAGGCTGGA
GACTTCAAAAATGATCGGGTTTGGCTGAAATTTGGCACACTTGTTCCTTG
GGTGAATATCTGGGGGTGTTTTTTTTCATTTTTTGAAAATTTTCATTTTT
AAGGGCGTGGTCACAAGTTTTCGCCAAAACGAGGCTAAAACNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCTATGATACAAAAGCAGTACTCAAGCATCTTGAAAGATC
TGAACAAAAAGTTTCTTTTTGACTATATTTTTAGCGCAGCTGGGGCAGCA
GCTGGTTCATTCAAAAACAGCTTTTTTAAGCCTCAGGTCTATTGAAAATT
TGAACCATAAATTTTTTTAGGACACATTTCTGACATTTCTACGATGTTAA
AAATATTGTATCGAAAGGAGTCTTTTTTCACTTCAAATCTCCACATTCTT
CTGGAGAAATGCAAAATTATCTGCTACCCAATCAGACCATACACAGAATG
CAATTTGATATAAAAATTTCCCTTCACTTTTTTAGGGTAATTCAAGATGA
AACGCTGCAATCTTTTAATAATTTACGGTGAAATTTCCGCTAATCATCAA
GTAATTATTGAAAGATTACAGTTTTTCACCGCCAATTCATCTATAGTCAA
GGTAATTGTTTTTTTCTTGTGAAACAGTTTGCAAATTTCATCTAAAAATT
TACAACTATAAATCGTGCGAAAACACAAATTTGGTTTGAATCTTGTAAAA
AACTAAAAAGTTTATCACAATTCCTGAACCAATGATCAAAATTACTTTAA
ATTTGGAATGTAGGGTCACTGTGACGATTGAAATGTATTTGTAAAAAAAA
ATTCCCCAAAAAATCTGTGGTTCAAATTTTCAATTTTAGACCTAAGGCCG
AGAAGGCATTTGACTGCAAACCGAATGCTTTGCAAAAAATAACTTGTCAA
AATAAATTTCTTTACTCAAATATCCTTTTAAATGATCCAAGTGGCATACC
CATAAAATAACACGTAAAAATGAATTGATTTATTCAAAATTGAAAAAAAA
TAAGATAGAAATTTCATACAACATTGATTTTTGCATGACAAAAATAAATA
TTGAATACAATGTCCTTATATAATGCCCATCTTGAATATAGTAGGGCAGA
AAAGCAACTATTACTAACATATAGCAGTCAATAAGAAGATAACTAAATAA
AATTCTTTTCTTAATGACTACCTTGCTAGGAATGGTTGCTACTTTGTCCA
CAATAGCGCTCTGCAACACATACGTCATAATTAATACTTTTCACTTTTTT
TGACATTTGTACAAGTTGCAATCCCACAATTCAACGCAGCTCAATTAAAG
ATACGTGCAAGCTGTTATATATCGAGAGTAGTGATTATATCAAAAATAAA
ATCTATTTTTAGGTTCAGCGCGGTGCCTTATTGAAGTTGGTGTCAACATC
ATTGGAAATGTTTATTATATATACTTTTCTAAAAATAAAAAATTTTAACA
CGCTACTTGTATAATTTTTCATTATTTTGAAACTACCTAGATTATTTATT
TTGAAACTTTTATATTTTTAATAATTATCAAAATTATAATCAGTATATGA
CAACTTCGCACCAGGAAAAAATTTGCTATGTGTGACTAGTAGTATAGTGA
CTAGTAGACTACAGCTTTATTCAAAATTTTAAAAGCTTTCTCAAGTTTTT
CAATAAAACTGCAATTCACCAATAATCTTTAATTTCACAAGTTTGGTATA
ATTACTGATTTTTGCTGTGTATAGACTGCAGATGTTTTCACGGGTATAAT
CATTTACAATATCATTTTTTATATATGAGTATGATTCATTCTTTTTTTTG
CAAACCACACTGATCCTCTTTTTTCGTTAGCTCGCGGCCTGTAAGAAAAT
GACAAATTAAAAAAATTTTGATAAAGAAAAATAATGCATCACACGTACAC
TTGTAAAACTTGTAAAAAAGCTGTGATTGAAAAATGCGGCTCTAATAAAA
TTTTCCAATGAGCAATCAGACAAAATAATCTGCATACACTGGAGAGTGTT
ACAAAAAGATTAGTCTTTCAAAATAAAAGAAAAGAGCCGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA
AAATAAATTCAAAACAAACCATTTACATAAAACACCTTGTTGCAAAGAAG
TTACAAACTAAAGTACTAACTAATAGGAGGCTAAGAGACTAAAATGCCAA
CGAATTGCATAAAACATTTCCACACATTTAGATCAACTTTCTGTCGCCCT
GTTTTGGTATCAAATTCCAGTCGGGTCAATTTGTATTCACAGCAAGAACT
GCCCCGGGATTTACCAGTCAGACCCGACTGTTTGTTTACATTTGTTCGAA
CCGGGCCGGCCGATCACACCCCTAACCAAAATCCAAAATTTCCGCTTTTC
GACCAAATTGATATAGTCTAAGACAACGGCCTCTCCCGTAAAAAAATTCC
CCTCTTCACGTTTGTTCTTTTTTTAGATGAAACTCGTCTTAGACTATAGC
ATAGTCTAGGCAGGCTGGAGACTTCAAGGGCGAATCCCTGTGGGTGGTTT
TCATTATTTTATAATTTCCATTTTAAGGGGGTGGTCATGAGTTTTTAGTT
GAAATTGGTTACAATCTTACAATTGGGCCTACGAATGATTTAAAAACACT
AAAGTTGATCCCAGTGCGGTTAGCACGTTCGACAGTTTCTCTAAACGTCC
CGTTTATAAATAAGATGTGAATAATTACTTTTTACTCAATTTTCAAAGCA
GTCGGAATTCACACTCCCTTGACATAGGTTCTAATTATAACAAAATCATA
ACGGCCAAGGACTGCTACTAGCCTATATTTATTCCCCTGGACCAATCTTT
GATCGGTGTTTGTTAGAAGCTCGGTACCGTGAAATAGTAGTATTACTCGA
TGTAGGTCAAATTTATGGTGCTGTCCCTTACAAAAATTCTGGCTGGATAG
TGGGATTTTGCCTAAATTTGGCGCACTTGTTCTATGGGTAAATAAATATC
TGCGGTTATTTTTTCTTTCTTTGTAAAAATTGATTTAAAAAAAATTTAAT
TTAGCGAGTTTATGTATTCGAGATCAATCGAGGGGACGGTAAAAAGCAAA
GTTGACATGTCTCCAAAATCACCGTTCACTTTGCTCGACGACGGTAAAAC
CACCAAAATACCGTCGTCTGTTTAGGTGAGCAAAGGTGATATAGAGTCGT
ACATCAACTATCGACTTTATTATGTATCGATTTCACTTACCATCGCCCTC
GACATCCTCCGATACATAAACTCGGTTTTATCTCCAAAACTAAGGAAATA
ACTTTGGAGAAGCCTGGGGTCTTCAAAAATGGTAGGATTTTGCAGAAATT
TTGCACTTGTTCCATTGGTGAAAACTTCCAAAGTATTGATCCTTGCTTCA
ATCAAACCTTCAAATTGTTGGAATACTGAAATAAAACTTCTAAAAACTCC
GATCAGAGTATATCATGGTTTAAAGGGGATGGAAGGTTTTCACATAATCC
TTAAAGTTATTCTTCTGCTCTCTTTTTTAGGTCGTTTTGCATCTGGTGAC
TATTATCGTTTGTCCATTGAAGCATTACGTAACGATTCTCGATTAGCCAA
TGGGCTTGGACCACCTGTTCGCTCTTTGTTCTTGAACCTTGGGGATAGTA
ATAATCGATTATCGCCCACAGAAGCACATGTAAGAAAATAGGGGTATTAT
TGTTATTAAAGGGGTCGCCAATTTTCTTACAAGTTTATCTGGTTAGGTAG
TTTTTAGAGTAGTTTAAGTAAGTTACATGTTAGTTTAGGTATTTTACACA
GGAAAAAATATTCGAATTCCATGCCTGGAAAAATACTATTTTCAGGTGGA
ATTTATTTTCACCCTGGAATTTTTTTGCTTCATTTTCTAAGAAGGCTGGA
ATTTTATAAAAACCGGTGTGAAAATTGTTCCTTTCCAGCCTTTCAACACA
AAAACTCTTGTCTGGAATTTCATAATTTTCCAGGTGGAAATTTTCCAGGC
TGGAAAATATTAAAATTCAGGTATTTTGCCATTATTTTCAAAAAAAATAG
TGACTTGGAAAATCCACCCCTAATTTGATTACTTTCCAGGGTGGTAAATT
TCCGGGTTGGTAAACAGCCATATTCAGGTCTGATTTTTCTTGCCATTATT
TCCCAGGCCTGGGATTTCTTGCCATTATTTCCCAGGCCTGGGATTTCTCG
GGTTGTAAAATGATCATTTTCGGGGTGGGATTTATTTTCCAAAATCAGAG
ATTTGAAAACCCACCCCAAAAATGGGCAATTCCCTGGGATTTCTCGGGAT
GTAAAATGTACGCATGTGCAAAGTTAAAACCACAAGTGATTTTTCAGTCA
AAAGTGTTCGAGTCGTATGTAAACCAAACCATTTTTAGGGTGTTTTCGAT
CAGTGTGTAACACAACGCTAAAGGTGAGGCGTCCCGCAAGCCAAGGGCGG
CCTCATTCGTTCGCAATGGACTTGCGTCGCAAGGGCTCAGTGGATCGGTG
AGACGGGTTTGAGGTCATTAAGTTGGCTCTCTAGTGCAGCTCCACTGTTG
TAATAAAAGTGCCGGGATTCTCAAAGTAGATGTCAGAACGGATGAGAGCT
ATCGAACCAATGCTCACAGAAAGATCGAATACATTTAAACACCCCTGTCT
CTGTGACCCAGTGGGATCCACCCCACTGCCCACCAAAAATGGCTCATTTT
TCAGCCCCACTGGACAAATCACTCACCCCACTGGAATGTTGTAGTAAAAA
AACACCCCATTGAAAATGATAAAAAGTTTACACATACCCCACTCGAAATG
CCCTCATTTTAACGTACCCCAGTAGAACTTTTCTTTCAAAAAATCACCCC
ACTAGAATTTTCTCCTTCCCCTTCTTTAAAGTTGAAATATCCAAAAGAGC
CAAAATAATCTGCTCGCTTCGCTCCCTCGCCGTCAAATGTTCCACTTCAA
TATATTAACTGTATTTAACCCGATTTCTAATGTCATTGTCATGGTCATTT
TAAAACGTAGAAAATGCCTAACGAGAGGGGTTGAAAATCAAAAATTTCTG
TCAGCGCAAACCACAGTTGTACTTGTACCTTTCTTTCTTTAAAGCTAGGT
TATAGCCTGAAAGATTTTCGATAGAGGCTTTCTCACTTGCGTAGATACTG
AAAGAAAGACCTCTACTTAAATCATGTTGACTAAACATTACTAGGTTCCA
GATTTCATAAAATTTGATGTAACGTACTGCTCCCAGACCTCATTACATTT
CCTGTTACAGTGTAAGAGTAAATCTACCTGATCAAGATGATATTTCTAGT
GATATTTAGTAGCATGTAAGAAGCAGATTTTTACTAGCACTAAACCAAAA
GTTAGCCAACACCTTCTATCTTTAAAACGCGACAAAATTAAGCGGTCTAC
CCAGTCTAACTCACAGGCTAACTAAAATTTAGCCCTTGCAAAAAATTCTT
TCTCACCCCAGTGAATATCAAGGGAAATTTTCGCCACCCCACTCAATATT
TGAAAGAATATTTTTCACCCCAGTGAATTTCAGGTCTTTTGATTCTCACC
CACTGGGTAATCAACACCCACTGGGGCACAGAGACAGGGGTGTATTTAAC
AATTTATTAAACGTAATTCATTTTCGGCATTTTCGCCCCCGAATATGTAA
ATATCCAAATTTCCAACCTGGAAATAAGCTCTTTTCAAACCTGAAAATAC
TGTTTTATGAATTATATCGAGGCTGGAAAGTTATTTTCTCTGGAGTGAAT
AAAGCACTTTTCCTACCCTGGAAAAAGTCACTTTTCCAAGGCTGGAAAAA
GTCACTTTTCCAAGGCTGGAAGAGGCATCAACATTCCAGGGCTGGACCAG
CCCAGGAATTTAGCAATTTTCCAGGTGGGAAAGAGGTCAATTTCCAACCC
TGGAATTCGATAGTTTTTTCATGTCTTAGGGGGTCGTAAAGCCTGCTTCC
CAAAAATGCATTCAGAACCCGGATGTTGAGCAAAAAGCTGGTCTTTAAAT
CCTACTCCTGCTCTTTTAAAGCGATTCTAAATCCAGATTGACACTAAATA
CTGAATAGCTAGGGGGGGAACTAAGCTCTCGAAAACATTGCAGTTGATTG
TTCTTTTTATTTTTGACAATAGAATCTCTACTTCTATACAGACCATCAAT
TTTCAGTTCGAAGTTAAATAAGTTGAATAAGTATTGAAACGAATGGTTTA
AATTTTTATTGGATCAACTGAATATTTAGCATTGATGATTTAGCAAAAAT
AACATCTTCATTCAATCATGGAGGTAGAAATTCTACCTCCATGATTCAAT
GTAGAAGATCGGCTTTAAGCTGTAAATTTTTCACTTTTTTTTTACAGTTG
TCAATTCCAGTTAAAGGAACAAAGCACAAAGGATTTCTGCACACCAAATG
TTCCACAGACGTCCAAGGGGAATGGAAGATCAATTCCCTTGAATTAGAAG
TCAATTCAAAAAGGTTTGAAGTGAATTATTCCAAGAGTATAATTGCAAAG
GACGAAATTGACAACGAAATTCTAAGAGATTGATGAAATTGGCCAAGTTC
AATCTTGTAAAATGACTATATAATGGAATAGCTTGTCGCGGCTTTTGCAA
GTTGTTTTGGAAACAGGACTTAGAGGAATGAACTCAAGGCAATCTTCTCA
CCAAATTACCAATTTTTATGAACTTCCTAAGAAGGAATTCTGTCTCCTTG
AATAGGTAAATAGGAAATCGGTGCTAGAACGATCCACATAAAATTATTTT
TTTGAATGGTGTGACACAGAGAACCAACAATAATATTGATTTTACTCTAA
CTTTGGACGAGGTATATCATTCGATTTACATTAGTTTCAGGAATCAGAGC
TTATGGAACAAATAAAAAGACGTACAAATTATCTGGAAATTCCCTTGCAT
AATCTTCTTTTAAGCTATACAAAACTATTTGGAGTCTTGCTTTAGGTGAA
ATGCCTTTTATTTCTCCGCTCGAAAAGCTTTTATGAATTTTCTATTAAGG
CGTCCAGCTATTAGAACATAGGGTTTCAGAATATTAAGAATAAGTTAAGA
ACTTCTTAAGGCTTCACAGACTCAAAAACGTCAAATTTCTTAGGAAATCG
CTCAAAACACTAATTTTAGAATATTTAAAGAACGTCCGAAGTGTTAATTT
TATTTTGGATGCTCTTATCGCAAAAATGTGTAAGTGCGTCTAAGTGTATA
AGTAAGGACATTTTTGAAAAATGTTCCATTAAATTGAACCTGAGATTGTT
CTTACATTTCTTTTATTAGGGTCTGAATTTGAGGCTGGTGTTCTTATAAA
ATTGTCCTTATAAATAAAAAAGGTGCATGACATAAGTTTAGACTTCCTTA
AACTTTACGAAACTAAAACCCCTGAAAATAAGTTTCTCCTCTTTGCACTA
CCATTATGCTTTTGCTTGAGTCGGCCTCGTATATTATCTATAGATCTCAT
TAAATTTCTTACGTCGTTCGCCGAAATAGATTTTATTATGTCCATTGTTT
TAAACTAAAAGCTAGACTATGCTACTTACATGGTGACATTTCAAAGTAAT
GCTAATTAAACTGGCTTTTATTTTAATTGATGGAGTACAGGTTTATGTTT
TAAAAGTTGAGAAAACTAAAACTTGAAGTTATAGGTTTATGGTCATATTA
TTGTATGCTGTCGATGCCGTTTATTTTCAAATCATGAATCAACAAATATA
CGTCCGCACTCTGTATCAGTACGAGGCTAAAAATGAGAACGAGATATCGT
TTGAAAAAGGAGTTTTTCTCAAAATTCTTAGTAGACCTGAAGGTGACTGG
TGGTGGCTTGCTTTAAACGAAGCAAACTCTCAAAAAGGCTGGGTACCACG
AAACTACGTGCAAGAAATTGTCGACTTGCCTGAACACAACAATAATGGTC
AGATAGGAAGAAAGCAAGCTGAAACAAAATCGAATCGAAAACCAAACAAG
TCAGACACACTTAGATACAACCAGAAAAATAAGAAAGAAAATGATGGCTA
TGAGACAATGGGTTCCCTACAAAGAGGATCAGGAGCTCAAGACGAGAGTG
ATTATGTTCTGATGAATACAGCAAATGAATTCCCACCAGATGACGGATAC
GATCGTGTGAAAAGTCAATCTGATGGATATTCGCTGGTCAGAAGCATCTC
TTACGGAGGCTACAAACTTCTAGGAACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058550TCONS_00058550Clytia hemisphaericatranscript
TCONS_00058549TCONS_00058549Clytia hemisphaericatranscript
TCONS_00058548TCONS_00058548Clytia hemisphaericatranscript
TCONS_00058547TCONS_00058547Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058548-proteinTCONS_00058548-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:863221..873448 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
47.62	46.9	48.26	44.32	11.98	11.74	14.37	17.69	21.74	17.33	16.82	18.03	19.57	14.43	13.29	16.13	23.77	25.94	19.15	17.58	21.8	22.12	26.81	24.34	14.62	15.73	14.03	13.48	11.22	14.05