XLOC_036852 (gene) - C. hemisphaerica

Overview
NameXLOC_036852
Unique NameXLOC_036852
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:1255224..1263407+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036852 ID=XLOC_036852|Name=XLOC_036852|organism=Clytia hemisphaerica|type=gene|length=8184bp|location=Sequence derived from alignment at scaffold_311:1255224..1263407+ (Clytia hemisphaerica)
tgtcactttcgatttcatttACGGACCTTGTGGACCAATAGATTAGCTCA TTTTTGACTAATCAGAGCCGTGTATTTTAAGGGCATTGGGCACTACTTTC GATATTTCACTCCTGTTCAGGGAAAAAAACTGGAAGAAGGAAGCACCACA CTGACACGAAAAAAGGCAGCAAAGTATTTAACGTTGAATGTTTTTTAGCA AACATGACAGAGGTATCAACTTCATCAATAAGTTCTGCAGAGGTTCAAAT TTTAAATAGGTTTCCAGAGGAGTCGTTTAATGAATTTATTCAACTTGTAT TTGATTTTCTGTTAAATCCGAAAGACGCATCCAAACTTTTGGAtgatttg catatattttgTGAGAATGCTGGGGCATCAGCTGGAGCTGTTAAGAATCT AGTAAAATTACTGATCTCATATTTGAGggaaaaactgaagaaaaatgttt caagtaACTCTATCAATGATCAACTTGAAAAGCTAGGTAAGATTTTGTAT CATCATTAGCGGCAATcgcaaatattttcatttcgcgtcctcgttgggtc taaaaagtgagtcggtcggtcgtaaaaaaTTTCGGGTTTCTATTTTTCCA TCCATGTTTGGagtgcattcttggaggaaaATGCCatccagccagcagcc aaaacaaccgcgtgtaatggcagttagtcacactaggaaatcaagctttc aaaaaaaaacaacaacatcagtcatctacaggatgtatttgcaaaacaag gatgagagttacctgaatcaagtttgcaagagAATTAtaataattaaaat ttgaaagtttgaaacaaaatgaaacgtgcagcagccaaaatcacccaatc aaaatttgtcattcaattcccaagacagcgcttcgatttttaaggccttg tttatataccctaaagtaaaaacaattccgcacatgtaaatgggtcagtg tttgaggtccggcaaaatttttgggaaatagcctatccggtaGTGCGCGT ATCTAGGTGGATTCCGTCTcccctgtagatctttttcttgggaagttgat cttcaaattagttctcaagaTTGGCTAGGCTCAAATTTTTTATCTATGAC TCAAACTTTagcagtgcgtcacaaacagccacataaacaaaactcaacat tctcacaaaagttgtctttttgatttccaaaacatttgtctaaagcgttc acttccacaataatttatgtaattgcaatttcggtcagtccacagtcggc ttcaacatatacacgtgtttttatttacgtgaccgaagtgcctactaaaa caatccgggggtaagtggcaaagaaacacagcagattattcgtaaagtaa agaaatatcttttggcattgacaatcaaatataatatattatattatatt tccttaattaaaaaatcaaaaattcatttttcatttgcacaaaaataaaa ataaaagaataatgaattaatattacatactaagacgcccccgtctttta ctctcttttaatttccgatctcggaacgtgcaatAATACGCCCGTctgcc caatatccacccaatcagcttaaattcactttaattgtcctttgactttc aaaaaatagtacagtatttaaaaattatgaattttaataattacaaaaaa caaaaagtttgatacttcattagtctgcattagtgaaatattcaataaat tcctaatttcaattttcagtgggcgtttttctagggcttcgtttatcacg caatttttgcgtcacgcAAACTTTCTCAGCCggtcgtaataattatgcat tgccaaatttggttctccattgtcaagtcaggatcgatggtgacaaaaga aatgattttgtcggttttatgcatatattaatttgcaagGTATTTTATTT GCTGCGcaagcgcacttttcgtagactagtcggaatactttcttttactc gctggattgatggtaacttttcatcttcgttatttttaaaatgaagcata accgaaaaaaaacaaaacttcaggaagttgcgtatttccagtgagtaaac gattctgacaattaacaaaattgatgatgattattttttttcggtcaggc aaatgtctcgtattgggggttctagtcttgacccctaagcctacgcaaga ttgaagcgtttgggtaaacaagacaaaactccaaaaaagctggtgttttt gaagcgcttccgtgcgatcgaaatatcgctgtttgtgacgcactgtttag gcaatttctcatagtttttgagaatgttaatttcattaaaaagcgccagg ttattttttcatgaatccctttagatgttttgccagggggggggggtctt gcagttactccttgacactatgtggagtaactgcaattttggacattttc tacagacaccaccacccttgcagttgtTCCaaagtgtactaactgatttt accctcaaaataggtgtataccacccccaaaaatggcaattttttcactg aattcctcatttttgataccattttactgggtacgtcttattaacgaccg ttcaagagttaaatatctcaattatNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaatcctactttgacaa taatttgcgctgtaccgcaaaatttctaagtccaagtgttgtgattagct ttagactgtccaatatttcttgtccagaagatttaaaCTGCATTGTTTGC AGTATCTCATAAATTATCACCCTAGTAATGTTGCTTAGTTATTTAAGAAT AAACAAGTAAGACTGTTAGTGTACACTATTATAgagatattggacagtct aaaagCTAATCAtgacacttggacttagaaattttgcggtaaagcgcaaa ttattgtcaaagtaggatttctgaatgagtctaaaaagtttttgaatagg NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcc actggtggagtaactgttttcccaaattttggtttatataccaccacggt agtaattgtcatagtgtttatataataactgcatgaccccccccctggtt ttgcagcacatttttttgcttgagagtcaggtaaacgatatagcactttc ccagcattaatctttgatacgcatttcggtggaacgctagtgtgactaac tgaatgggtggtttaaaattatggactttgaacactgtgacctccgaccc aaaaatggcgcatgtaatgataaacaaagtcaaaattctGTGAATGCACT AGAAattggcaataataaaatttttgaacgaaggaaagttaactgacaga aaaagtccgacaaatttatcgactcaccgactcaattctactcaattttc gagagtcggtcgggcgacacgaaacaaagatatttgtgattgccttatta ttattattggcTGTTATgaaattccttataaaaagaagtTCTTCTACAAA AAGACGCTTAAAAAAACGACATGGAAAAAGTTGTTCAAAAttaaatcatt ttattttaacaatttCATAAACTACGTCACAACCGCGGAGCGCTGacttt tttatcactttttctCAGTCATTTCCATTTGGTttccgtaataaaaagaa agacgtTAATTGTGAACTTAAAACATGCTTAAAGTCAAGGTACTTCTACT AACTGTCTTTATGTGGGAAAGTTGCAAGATCACCAAAGATCATCTCAAAA AAAAGATCACCCAGCTTATTTctagaaataagaatttttttggccCTGGT TTCACAATGAGGCCCTGGTACCAACAATACGTCTACATTAGCACGACAAA ATAGCAAgccatttattttcaatttccgaTAGATTTGATCTctgccaaat tttgaaaatccatttttcaagcttttttcACTGAACAACCAACCAACTCA TATTTTTTACCCAAAAATGATGCCAACACCTGCCAGCACAAGTTTTTTGT GATCGCAACCTTAACAAAATTTATGCTAgaagtaattagttattcaagaG ACTGTTGTCAGTATagccctaactcttcatacaaaatttaTGGGAAAGGT ATATTAGATTTTGTACCAAATGCTGCACACAAGCACTTAGGCTAAAGTCC TAGAATAGCAGGACAAAAATTAGTCTTTTGAAGTTTTCATTAAATTTCCA CGTATATATAAGATCTTTcgaattcagtatgtgaatagagcagtaaaaaa tgcaacttttctatgtttccttttttttgcaaaagtaccaGTGATGAAAA GAAAGggtaaattaaataattgaatataataaataataaaatgataattg aatactgaTGATCCACAGCACTATGGCGAAGCTAGAATTGCTTTGTgtac tctttgcttgagaaaataaaatgattgacagattaattttttcacccgtG AGGGAGTTTGCAGGTGTTCTGGGGGCATGGCTTTTTTCAACTTGCCCAAA TTCTTGAACTGTGGCAGGTTGTTACATCTGACAAATTAATGCTTGTTTTA TACTTTTAtttccattgaagaatcatactCTGGCTTTTATTTTACTAAGT GCCCTTTATAGTTTTAgagtatatttgttttgttctcCCAAACCACTATT GACAAACTTTCTCAGGCAGTCTGAACCATATTTTTCTAGATCTTTACCTT ATCACAATATCACTTTGACTCCAAAAATTTGCTTTTAGTAAATGACTCCA AAAAGAATTTAAGGCTTCAATGGAAAAAAGATTGAGAAcaagttgagaat attttaaggctttggggacctTAAACCATCTATTTTATTAGGAAGACAGA CAATACTCactaaatgttgaaaataaaaacatgttaagaactttttagac ttaaaactaaaattaagaacataattaattgttaaataaaattgtttttt attaaggCTTATCTGCTTCTAAATTGGAGATTATCCTTGAGAAATGGAAG CAATATAATAATGTTCTCACACGATCAATGGCAAATCAAGTTTTCAATAT CAATCAACTTGTGGATATGGATTGGAAATTTGGAGTAACTGCCGCAACAT CAGATGAAGGTCAAGTCGGACACTCTTTCATTCAATTAAAACTTGTGATT GACAaaggaaacaaagaaaatgaaaacgtttGTTTAGAACTGACTCTACC ACAATTTTATGAATTTCTCCATGAAATGcaaaaggcaaaaaatagttTAG AGTTACTTGGTTAAAAGGTAAGTAATTTATATGTAGATAGAGTTATAATA CTATGttacttttgtatttttcacaatcattatttttttcagtggaACCC AGCTTAGCAGTTTTACAATTTTATcaacagtttttcttttttgatggaAA TAAGAATACCTTTCTCATTACCATACCAGCTTCTTTGATTAGTACTGCAA CTTAGTTACTGTGTGGCCTGgtttattttgacat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058493TCONS_00058493Clytia hemisphaericatranscript
TCONS_00058494TCONS_00058494Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058493-proteinTCONS_00058493-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:1255224..1263407 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
COMMD7COMM domain-containing protein 7 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
38.23 34.87 20.05 21.15 16.05 11.55 19.41 20.58 18.93 18.83 17.78 12.89 18.2 11.88 18.41 19.82 20.6 20 14.2 17.86 21.3 21.98 31.23 35.62 12.29 17.83 18.34 14.69 27.24 30.99