XLOC_036832 (gene) - C. hemisphaerica

Overview
NameXLOC_036832
Unique NameXLOC_036832
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:562844..573210+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036832 ID=XLOC_036832|Name=XLOC_036832|organism=Clytia hemisphaerica|type=gene|length=10367bp|location=Sequence derived from alignment at scaffold_311:562844..573210+ (Clytia hemisphaerica)
gaaatcCAAATCAACTCGGAAGAAACCAAAAACCAAACGGAAACGTATTT GTATGCCACGCTCAGCTGCTTCCACCAAAACTAAAACGAAAGCCAAAACA CCTTCATCTAGAGCATCAAAAACAATGACTCCTGGATTGCACGATCGTAC GTTACCGCGCGCTGAAGCAACAAGTCCACTTGAGTTTGCTAGGAAAAGGT AAGTTGTAGTTTGTGAATGTAAAAACACCTCAAACATTCTAGCCTTAGAG GTTGTTGGCCTTCTCCCCTTACCAttggaatgcgggtgaaggaaaaaagc tctcatgcggccggccgggaaaaagttttttctgctatttttgataactt ttgatagatcattgaaatagaaagataacttttttgtactacaaacagta tgaagtaagccctgaatactagcGTATCAACTATTAACGAACAAAACTTA ATTTACAAGCGgaaatatctaaccaaacgacgtttgatagctcgAACGTT CAACTTaactttctttatgatgaaccatatagatgaacccatagtctgcg gccgggtcagcgTTTTTTTCAcacggccggtttccggaaacactacattt ttttaatttttgactaatgaaaatattttgtttgatgTAATATTTCTCTA CTGACAAAAAAAACTACTCGATCACTATGTATACCGCTGAATAATTCCCT CTGGAAGATGCTATGCGCCAGTAGCCTGTATCAGCCCATCCACGGGTAAT TAATTTGTTTGATAACGTACTTCACCTCATTCCCTTAGCAAATAGTAATT TGGTAATAAGTAATCTGTGGGGAAATACCTGGGATTCCTGGGTTTTGCTA TTACAATGgattttctttaatttgaacACGCCCGGGGATCACAAATCTGT TCGAATTATGGTAATTTCATTGAGTAAAATACATTATGCAAAAGACATTG TTAACCgaagggaccagaaaacttgttcaagTTTAGGAGACATTCGAATG ATAGACTCCACTGTAATCACCTGTTTCCTTTACCTGTTTTCCTTAAAGGT TGCACGTTTCGGCCGTTCCCGATGCGCTTCCATGCCGCGAAGACGAATAC GACGAGATTTACACTTTCGTCCAAGAGTGTCTGCAAGAAGGCACTGGAGG GTAAGTTGGGCGAGTTTCTTTAGATGTAAAAGTattttaatcggattaac tttcgcaagattaaatttcgcgttttCCCTGACTCGCAGAATTAAAtcca attaaatttttttcgctctcaaaatttaatccaattaaagtaccacattg cccgatgatgggaaaagaatctctcgaaacgtagccaaacgttaatctcg tgatccaagccacgataaacttccaatatgaatatcactgggtcgataaa cGCAAGCTTATTTAGATTAACTGATTAAAGTACGATGCTCTACACCACTC TTAAGAGTACTTAATCTTTCTTTATGCAGCGTATGTACAAAGAGTCTTGA AATTCTTTcttcgatttcaaaaaatgatttatCTTGTGCATACGTGAATC GGCTCTCTCAACTTTAGATATTGCATTCGTAATTCGTAATTtcgctcttc caagcaaaaaaaagtgaatatcgcaaaaaatattcctgctattgttttcg aaaacctgcgaagcttcttattggttaagcgctgaaattctattgtaatg tcatgtGATCTAGGTAGGACTTCCTACCTAacatcggcacacttttcagc caaagcacgacgtctagcccttcgagctttatAAGTCCATGGTTGATACT CTTTGACACTCATTGATCGATCCTTAACTCTTATCCTCGTGTTCCTGTTC ATCCGACGGCCAGTCTCGCATTTTAGTTTATTACGTGTCCTGGTTTTCTT CGTCAATTACGTTTTAATTACCAATTAATTACGATTTTCAACCAAAAACA ATGTACTGGCTTTTTAGGGGACTGATGATGAGTTTACAAGGAAAATATGC TCTTAGAGACTGCCTCTAAAACAAACCAAGCAAACTCCCGCCATAACTTT ATATGAGAGATGTCTCCCTGAGCCTCTTCGGTGGAGTGCAAAATTCTTTT AGTATTTGAATAGcccaataaaaatattgaccttATTTTATCACTTCAAT GCAAGGGAATCTCACATTTTTCACAATCCTCTCCTAAAATTGTGTTTTCG ATACCGTCGTCGCAAAGGATTTCCTTGTATTTTTGTTACCAGGAAGATAG GCGTTACACTAAAACAATTACGATGAACAAGTTTTCAGTAAAAGattaat atatttttcagttgttacatacacgttttttttaagaaactagttttacc aagcagcctcaatgtttttTAAGAGCCTTAagtgtttctaaactttttga cataatcagcctattttttaTGCAAAGAAATAAACATATGTTTTTATTGG AAGGtacttaaaaaaaacgaattaaaaatgttattttctcattctgagcc tcatgtttcttaaaagtgtttcttaaaaaaaacgtgtattacatCCATTT TTCTACGCTTATATTCAACTTGATAAAGACAACCGTCGAAACGTTGCATA CACAACTGTGTTTTTAATGTTCACCTTTTCAGTTGTATGTATATTTCCGG AGTTCCGGGAACCGGAAAAACCGCCACAGTCCACGAAATCATCCGGACAT TACAGAACTTCTCAGACGAATCCATCGTTCCGCAATTTAAATTTATCGAG GTGAACGGTATGCGGCTGACAGACCCTAATCAAACGTTCTGCAAAATACT TAAGGTGggtttaaagattttgttttgctttgtttgattgatttttaaac AACATGAAGAGTCGTTTTAATAGCGAGATNAGTTTTTAAGTgctttgttt gattgatttaaggtataaaatgtttcttttaaCTTTCCACTGAGAAAGGT GTTTTGAGGTACGATGACACATCATAACTCAATGGAAAACTCATTATGTT GCACTAAGCCATCCTATAGAATTTGGAAGCAAATTCGGAGATAATTCCAC GAAATTTAAACAGTAAATCAAGTGAAAACATGAGCAATTTGGTAAATTTC TGTATGATTAACTCCTAATAATTTCCTTTAAGAAAGCCTAATACTGGAGC ATTTCCACTCATCTACCACTGCTTTTGCCTGTAATGTTTACATTCTATCC AACACAGTCTCGCTTTCATGTTGAATTTCCCGTGTTTGAGTATTGCGCAA TCGATATCTGGAAAGGTTGCTGCAAAGTTAAATGATAATGAGTTAAATGC TACAGGGTAACTTTTTTCCTATTCATCGTATCACCATGAAACTCAAAACC CTTTTTCCTTAGTAAATTTAGAGCCTTTGTGTGAAATCTGAAAGTTATAC CATAAATATTTATCAAGAATTCgaagtttgaagaaaaagtaCTGTTTTTA CAAGCGAACAGGAAGTTTTATTTTGACGTCAGAAATGGAAAAGTACAAGT TTTTCAGTTTCATAAGAAATACCTTTAAGCATGTTTCATTGAACCTATAG ATGAACGAATTTGAATGTTGAACGCCTTAACAAATTCAAACCAACGTTTT CTTCTTCAGGATTTGACAGGTCAGAAAGCCACACCAGATCACGCTGCAAG CATCTTGGAGAGAAGGTTTAGCCAACCTGCGCCCAAGAAAGAAAATACTG TTCTCTTAGTTGATGAggtaacccagctggcacacaacattgtttcaacg tttatttaacgttcacaacgtccatataacgttagatgaacgttaaaaca acgttgtgtgccagctggtaaACTGTTTAAAGggagggacataaaagtac tgacgtaATTTGCAagcaaaccgtatgcagcgggatactacaaaatcaaa acaaatatggctgattttgattgtttcaatattgttttacaagtttgttt tggacacgtgattttaattgttctatTTAATGACACGTAGgttgcgcaat gtttacattttgtccCTTTAATCCACAGGAATTTCCTCTTACTTGACGGT GTACTGGGTAACCAAAGCAAAGGGTTCGATTGCTCGTAAGGGTTTGTAAT AATGCGAATTTTTACAAAAGcaacttttttttgtaaagaagaaaatgaaa cttaaaatttgatacATACATTTGACGCCCTTTAATCTTCTATTTGAcgc gctccattattcgataatatcgtcatcgtcaacaagaaactcttataaat GACGCTCTACTATTTGATACTCTCGATGAAATAATCTTTTTCTATTCATT TGACTAAATTTTacaaatgacccatcaaaatttatgttGATCTGTCCTCT TTCCGATTTGAAAGAATTACTTTTTTTGATATTTGTAGCATTTGAGGAAA TTGAGTTCAAAGTGTTAAACGTCTTCGTGTTGCACCCGGTAGTTCATTTT CGACTGCAATTCTTTGAAGGCCTCCGTCTACGGGATGGCCACTTTAGATT TCTTAATAtccatgatgtaatctttttatTGATTAACACATTGATTCAAA ACATTGGTCCGCCATTATAGATGGCATAATATTTTCGCACTGCAATCTTT GTCAAGAAAAAATccctcgaacaaatttgtgtttcccgTCCGTATTCGAG TTATGCAGACTTAAGTGTATCACGCCTTAAGTTATTAATTGTGCTTTCTT TTGTGTACACCATcggtttcaaaaaaaatctgttACCTTGTCTGATCTTC TGCCATCAATAATGGCCGCCAAGTTTTACGTCACATCTTTTGTTTATGCG TAgtaaagattgcatcatgaatgTCAAGAATTGGTTGATGACACTTACGA TTCTAAATTTTTGTGAAGACCGCCGTTGATCCACCCATTTTATACTTTTA ATccatattttgttttagttggaTTTATTATGGACACGCAAACAAAATGT CATGTATAATCTCTTCGACTGGCCCACCAGGCGCCATTCGCGACTCATCG TGCTTGCCATCGCCAATACCATGGACCTTCCTGAACGCATCATGATGAAT CGTGTTTCGTCACGTCTCGGTTTGACTCGATTAACTTTCCAACCATACAC CTTTCGACAGTTACAAGAGATTGTCGTATCGAGGCTAAGAGGAATGAATG CTTTTGAAGAGGACGCTCTTGAATTAGTGGCCCGTAAGGTACGTTCTAAA CACTAGGAATTAACggagaaaaactttttgacacaaaaactttttgacgt ctttgtaaggtcattggtcggttgaaaaatgaagcaattccattggtcga aattgacgtaacgaaTGAAAAaatagaacttccttcaacttttttttgtt cgcgcgaaacttcaggcaaaaaagattaagaacaaAATTGTCGCcctttc gcgcgaaagtggagaccggccttaagatgTGGTCACCTGTATTCCCGTTA TAAATCTTGATGCAAGTcactaaattgaaaatcaaaattaagttGGCCAA TTATTGAAGGCCATCGTGTAAGGTTTAAGCTACCATTTGCTTATATGGCA TtcataaacaaaagaaatacaaaTTTCCACTCCAACCACGCTGCACGAGC ACAAATTTTGTGCAGATCTTTTGTTTAATCTAGTTTGTCAGCATATTATT CATAAAAACAGATAAAGAGATGCGTCTGAAATATGAATTTCGCACTAGGT TTTGTTTTTCGTTAATCTTGTTTTGCACGAACTAAAGACATACTGAAtca ttgaatattttcaatACTTTACCAGGTTGCAGCTCTCTCTGGTGACGCTC GTCGTTGTCTTGATATTTGTCGTCGTGCCGTCGAAATCGCCGAAGAGCAG CAGCAACANATTAATGGAGCGTCCATCTTAAAAAACCTTAGGCGTGGTCA CCTGTATCCCCGTTAGAAATCTTGACGCACGTCactaatttgaaaatcaa atgaaGTTGGCCAATCATTGAAGGTGTAACGTTTAAGCTACCATTTGCTC GAATGGCattcttaaacaaaagaaatacaacTTTCCACGCCACCCACGCT GCACGAGCACAAATTTTGTGCAAATCTTTTGTTTAATCTACTTTGTCAGC ATATTATTCATAAAACAGATAAAGAGATGCGTCTGAAATATGAATTCCGC GCACTAGGTTTTGTTTTTCGTTAATCTTGTTTACACGAACAAAAGACTGA Atggggcttttccagaaaaaatctgaatatggggggtggaggatataaca attttcagtgatttaccccccggacaaagtgacttttggccccccggtAA ACGGGTttaacccccggacaagcatcagttgaccccccggacagagAAAA tataccccccggacaaggcaaattatgatgatttttcgctatcCCTCGGA CAATACATTATCcaacccccatgtacggacattttctggaaaagcccaat cattgaatattttcaatACTTTATCAGGTTGCAGCTCTCTCTGGTGACGC TCGTCGTTGTCTCGATATTTGTCGTCGCGCCGTCGAAATCGCCGAAGAGC AGCAGCAACAGCAAAAAACAACGACAAAGAATTCCGATAAACGACGGAAA TCAACAGTCAGTGGTAATAAAAGTCCAACAAAGAAAGGAACAAAAGACGA CGACGGACTCGTTGGTATGCGACATGTCGAAGTAGCATTAAAAGAGATGT TTTCGTCACCGAAGATCCTGGCGCTTCAGAGTTTGTCACTGATGGAAGAA ATGTTCATGAAAGCCATCATCAGCGAATTCAGGAGGTCTGGACTCGAAGA AGCGCAATTTACTGATgtaagttaagcttattttcaGTTTTGGAGCAAAG TTTGGGACTTTGTAGGGATTTATAGGGATACAGttcttgttttcaatttc taTGTACAGTGGCGTAGGCGGAGCGAAAtgccctgcaaaatttatgaggg agtgcggacgtttatgacatattcattatcttttgataaaacaaagacaa taattatagtgtcgtaaaaaccactctcatccataaattttgcagggtat ctcgctacgcctatagGTGGAGTCACCATAACTCGATCACGCAAGGGGAA CATAAGTTTGCTCGAATAATGGgaattttgagttatggagtaaggtttat aatatataaggtattgttaactaaaggtaccataaaacttgttcgagtta gtAGACATccaagttatagaggttcgactGGAGTAAGAGACTCAACTGGA GTAAGAACCTTGTTCTTGtcagactgggaatccagtcgtttataacgttt ttgttgaaatacgggaaatttttatgtcgggatatggttaaaataaacga ctgggctaaggtggtttccgtagcctacgggagttccagcaggacccgca gatttctgcggggtgagaaaacaatcatatacaacaaaatatataaacaa atataaataaaaatttcagccaatgagaatttctaagtgaaagaaaaaaa aaaccaaaacaaaccaacaagaccccctgaaaatgttatccaaaaacatg aaaaaagagaatttttatgaaaagattgttgtgcacaaaatattctagac gactatattgatgctcctgtcaagttttctacttcctattttttactgag ttaagtcgtctagcatgctagactatgTTCTTGTGTGTGTGTGGAGGTTT AAAGAATTCAAAATGGTAAATCTTTCAGCTTGAATGTGTTGTACCTAACT TCTTCAAGTTACGGTGTCGAGAAGTGCCCACCTTTTGGGAAATTCATGAT AGACTTGAGAAAACGTATAGAAATTTATCTAGATAAAAAGGTGATAGAAG AACTCGTAGCTTTGCCGTTCATTTATGATTATGCTCGAATTAATGGGTCC GGTCTGTATTAAGATCATGTGTTTACTTTCTCTCTTTCAGATTTACGATC AATTTCAAAGTCATTGTCGCGCAGAAGGTAACATTTCTCTTTTCTTCATA TCCTCCAATCACATTCTCATATTCCTTACCATGATGTGATTTGtatgttt taaaggttttgtttttaaataagagtgatatcgtttgcttactcatcaat tttaattcacaagctttttcacattggattgacacggatgtggagcaaga ttggtcagaaagaggaaaagaaaaacatttttttgcttatatcagcataa taaaCAATaggatatgaaacgggaacacttacgCAAAAAAAAACCCTTTA AATGGCTGAAGTTAATAGGTCAACTTAGATTAGGTTTATATTTTAGTGAG AAGAAAAGTTGTGTGGTTCTTTACCACGTTTTTAACATCCATCCGTCAAG TCATATTTGAGTGATAAGATAAACAGATAACAAACAAAAATAGACTTTAA CCCTTCGTAGTAAAAATGACCTAAATTAAAACCAAACAGCAGTTAAGGTT GATTTCGAAAGTGAAGACTAAATTGATTGTGGTTTCTAGACTTCAGTGTT CACGCGATGTATGTCCATATGACGTCCAAAGCAAGTTCCAATGTCtcgaa atttgaaataaactttTCGATCAGACCTAAATCGCAAAAGTCCCTAAAGG AAGTCCTTTGAACTATGATAATGTTGATGAATGAAAGTTGTCCAGATCTA CTACGGTGGAGTCTTCATAAATTGGAACGCAGATTTGTTCgagttttaaa agaatttcgagttatggggcTAGTTATGTTTATCAGGCATTGTTGAATGA aaggaccataaaacttgttcgagtttagaagacatttgagttataaagaa gggtactctcgggtacctaatagccgtccccccccccgctaattaatttt tcgaaaattttccacccaggacattcttattccaacccNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNactgtattagcctcctttt caaacattttccacccaggacatttttattccaaccccccgcttattaaa ttttgagattttttccaaccccctgcttatttCAACCccctctaaaaatg gcattcttagcttgagttccatgatggtgatattcttagcattattctta atggACATACttttaaagtgtattcttatatagAAAAGGCATGTACTGTA CAACCTGAAATATATGTTTTTCAGGAGGCTTTGAACCACCCAACACATCA GAAGCATTCACCATTTGTAATTATTTGGGCTCGTTCCGTCTTCTCCTCAT CGAAAACGGAATCAAAGATATTCTTCAAAGAGTGAGACTCAATGTGTCaa tcgatgacgtcatgttTGCTTTTAAAGCTAAATCGAGCATAACGTAGACA TAAAAGAGCTTCGATCCTGCCTTTGAGTGCTACAGATGCCAATTAGCAAT ACTTATCTTCAAAAGGATGTTCTTTAGAGACCGAGGCTGAATATGTCAAT TGGTGACGTCATGTTTGCTTTTAAAGCTAAATCGTGCACAACGTAGCATA AATGGTATGAGTGAGTCATAAAGGAGCTTCGAACCTATCTTGTCACAGAT TTCCCTAATACTTATCCTCAAAGATATTCTTCAAAGATTGAGGCCTTATG GATAGATAATTTAATCGAATTAACTTTCacgagattaaatttcgtgattt CTTTTTCTGCTGTCTCTGGTGCTTAGTTATCGTATTATGAGATCAGCTTG TAGTTTCTTAAGCTGTATTAATTAGAAGCCAATCATTTGCGTTGTAAGGC CTCACTTGTAGCTACAAATTGGATTTTaatgtaccttatcggccaaaact tagtcggccctaaatgacgaaattttggcttggtgattaaaattagggcc gactaaaaatttgggccaaattaactGTAAATAGAACcgcttagtcggcc ctaagtgactaaatacTAAactttgacgaggtgactaaaattaggaccga ctaataattaagaccgactaaaattaaggccgacaagttttggccgataa ggtattggTATACTTTTTACCAGGAGCGAACTGCTTTAAATTTCCAGTAA TATTTCAGTTTTTATACATATTTAGAAATTTAATTAtttaaaatagcaaa aattttatcaattttataaaTGTAGAATATATTACATATTCCTAGACTTG TAAATAACGATTCTGGATagggaaattttaaaatattttgaaacacattt tgaaaatcagatTCTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058450TCONS_00058450Clytia hemisphaericatranscript
TCONS_00058451TCONS_00058451Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058451-proteinTCONS_00058451-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:562844..573210 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.72 2.41 1.46 0.93 1.38 1.9 1.1 1.58 1.67 2.43 2.21 1.82 1.63 1.74 2.76 3.92 2.49 4.21 1.84 1.92 1.57 1.92 2.54 3.3 0.94 0.85 1.56 0.45 2.04 2.35