XLOC_036816 (gene) - C. hemisphaerica

Overview
NameXLOC_036816
Unique NameXLOC_036816
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:99931..103629+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036816 ID=XLOC_036816|Name=XLOC_036816|organism=Clytia hemisphaerica|type=gene|length=3699bp|location=Sequence derived from alignment at scaffold_311:99931..103629+ (Clytia hemisphaerica)
GTAGTACTGGTTTAATTCGCATCCAACAAGCATCGATCCAGGAACACTCA
AGTTGTCAAGGAACAGGTGGCTCATGTGAGATAACAGACGCTGAAGATCG
TATCAGGGGAGTTTGTGATGACAAGCAAACTTGTACAATAACTGCCATTT
TATCATCAAATGACGTTGATTTTAACTGTGTTCAGGTGGCTCAGGTCTCC
GTCGAATACAGTTGTGGTAAGAAAGTAACACCTTAAGTAGattcattttt
ggcaattttcgaGAATTTAAAATTCCAAACTCGGCCAAAGCCTCtaaaaa
aaagcagaaaaaaatcgaatgaaaAAAAGCCGCAAGCTTTTTATGTCagt
ttgaagttttgaaattcaataaaaaagttgaaaattttcacatcaaatat
tttcacatcaaatgTTGCGCACTGAAAAggtcaatacaccttttcgaccg
tagccgctaattgccgcgcgggcattttttaccaccctaaaaccgtccca
gtcttttttcgcgcctgaagacaatagaaaaatatgtaaaaaaaggattg
gatcgagtttagggtggcaaaaaatgcccgcgcggcaattggcggctacg
gtcgaaaaggtgtattgatgtATCATTAAAATAATGACAATTTTCATCAT
ATAGATCAAGACGGAACCTGGAACACATGGACGAAATGGACATCTTGTGA
GAAGACTTGTGGTTATGAAAAGCGTAACCGCACTCGGGAATGTGTGGAGC
TATTGGGTGGTGGCGCCCCATGTAATGGTTTGAATGTTGAAGAAGAATTA
TGCGATCATCCATATTGTGAAGGTAAATTCTTTAAACTCaaattccgtaa
aaaataagcataatgctaagcatacctccaagctgaaatgcaaaaaattg
cgTGTAGCTTTTCCTAAACGAtgacctttttagggttacCTTTATGAAGC
TATTTTTTAGCTTTCTTAGACCAAGGACTTTCGCATACGTcgtcaaatca
caaaaaaactAACTCTTTGAGCTAAATCAATGTTCCgatttaaaatcgaa
atttccataaatcCAAAGAATCGAAgtctaaatatataaataagcattaa
attctttgaataatttcatgatttcaCGACCGTATCTGTTCAAATCTGTT
CAATTAGTAAAAATACAAAGTTTATATTAAATTTTGGggattttattttg
ctttgtttATCTGTATTTGATTATTCCAAGAAAATCGCAGAAAGTCTGTA
TGTTTTGACAGGGTAGTAACCAATGatgtcagtttccatggcaacggggg
gcgggggggggggtcgcCCAAAGCCCCACCTTTCAAATTTGAGGAACAAt
aatcaatcataaaatccctttgcacaagctccTGCATACGGTAAGACATA
GTGTCCTCTACTATAAGTTTTGAAAGTTGTTTCCCAGTAATTGTCTTACG
TTCGACTTTCCAGGTTGTGACGTTGACACGAAGGATCCCGTTGCGGAAAA
CGTCGAAGAATGTATTGCAGATGAAAAACTTTGCTTGTCCCATGACGGAA
CACTATGTTACAAAAGACACTGTAAGTGAGAAATATTCTTCCAAACTCAA
ACCCAGTCCTTAGCTTACTTTGTTATGTGCTATGATAGCACTAACGCCCA
TCAATAAAATCTAATAGCGATGCAAGTGGCTCTGGATCAACTTACAGCCA
CTTTTACCCTTTTTGATTCAATCCTTTCATTAGCGATCAGTATTACCATA
AagcgaactaagggactggaTATACAAGTTTGTACGAGATTGAAACTCTG
CAGTATTTTTATTCTAATTTCTGTGGGAGGACACATTCATCTTTTTTCAT
ACACAACAGTTTCAACATACTTTACGAGAGTTGGCAAATTTGAGCTCTCG
AGTCTTAACAATCTGGTaccttataaaaataaaaatatgtatATTTTCCC
AGTCAACGGTAGTGTGACCGAATGGGCAGAGTGGACAACATGTGTGGAAG
GTGAACAAGTCCGTGCTAGAGTTTGTCAACAAGGTTTTGGACCGAATGCA
GATTGCGTAGGCGAAGAATTGACACAGGTGAAGGCGTGTCAAAACGAAGA
ACAAAAACCAAAATGTAAGAGCTAATctaattttcgtgattttagTACAC
TAGCTTGCGTTTGCCTTTCATTAGACACGGGAACGCAGGAACAAAAGTAC
TTATGAagcgttcttataaaaaagataaattgtGTTCAGCTGACGTATAG
TGAGCCAGCAACTGCAGCGAAATGCAACGACGTAGCTTACTAGTTGAAGA
AGTTTTCTATCGGCGGTGGTTTTAAGTATGTAACGCACAAGGAAAATTCA
CCTACTAGTATGTTTTCTTTCTCTTAGTCTCAGtcaataaagtaaaataa
acggttcttgtttttttctaccgggtgcgccacaaaaaggtTTCTCTTTT
CACACCCCCGTCTCATAGCCCCGATGAAACTATTttcctcaatggggata
aaattccAATTgtaatcccaatggggataaataTTCTATTGCTCCaatgt
taaaaaatccagtaggGATGTTTTTGGTGGAgtttgaatttcgagtggga
aagaaatcaaagtcaattttccagtggggctgaaattcgaaggtattttc
ccaccggggacgaatttttagccaaattttccaaTGGGGCTGGGCTTCCA
GAGGGTCTGTGACACTCTTCTTTTGAAACTAATCTTcccgaaatcttaaa
attaaaaaaaaaacactcctAATTCAAAAAGGGGAAGAATAAATGACGAA
AAATCtccatatttcatatttttttgtagCAAACCCTCCTTCACAATCGA
TCTTCGTAAAGAGAAAAAGCGACGAAaacatgacgtcatcgaaaCTGATC
GCACGTGACGTCACACAGATCACGTGTGTTTTGAAATGCAAAGTGATCGG
TTGGTGTCGCAAATCAGGATGGAAAGCTGCAAAGGATGGCGGGATGCTAG
GGATCTGTTTTGGATTTGATGGAGTTGACGCTCCAGacgaaagtttgaaa
atatttcaaaatgtgaTTGTGTTCGATAACCCTACATGTGCtccataaaa
ttaaaaagatatccTACTTTGATGGGTTAGACTTTCGCGGATTttggtgt
catccgcgaaaatccgcaaaattaagtcccaatggaaatttgaaagGGCC
TCATCCACGAAATATTTCTGAACAACTCAAtcaactcaaaatatgtcaaa
tactatttgaatgtttactgCGGCATAAAAGAAGCGCTTTACTAGtgatg
tatttcaacaaccaacgtgcatgatttgacagtaaaaggcacaaaatcat
gaaaatattgccacccaacagcaaaatttaatcccctcgaaagtttatcc
cattaaagtagatgGACTCCTGCTACTACATTTCCCAAGCTAGAAAAGCA
TATTAGATAACGTATTTTTAAGAGCTGGAgtctctaaaaatattttacaa
aagaaGAAAACGTAGAAAGCAGGCTGAAATTATGGATATCCGGGTTAAAA
TTTCAGCTCCtgggaattgttttttttttcatgaatagtTGGGCCTTGAA
CCCCTGTAATTAGTAACGGGAATTGAAAATGTAAGGCCATCAAAACGAAT
GAGAAAGTGGTAAAATGGTGGCAAAATATGACGCCTAGTAAAAAGTGca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058428TCONS_00058428Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058428-proteinTCONS_00058428-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:99931..103629 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.86	4.5	5.16	5.68	0.51	0.37	1.18	1.66	1.84	1.49	2.27	1.67	0.32	0.2	0.83	0.53	2.09	2.1	0.34	0.6	7.33	5.92	2.51	4.56	3.62	9.2	0.96	1.11	0.78	0.58