TCONS_00058428-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058428-protein
Unique NameTCONS_00058428-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length306

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058428-protein ID=TCONS_00058428-protein|Name=TCONS_00058428-protein|organism=Clytia hemisphaerica|type=polypeptide|length=306bp
STGLIRIQQASIQEHSSCQGTGGSCEITDAEDRIRGVCDDKQTCTITAIL
SSNDVDFNCVQVAQVSVEYSCDQDGTWNTWTKWTSCEKTCGYEKRNRTRE
CVELLGGGAPCNGLNVEEELCDHPYCEGCDVDTKDPVAENVEECIADEKL
CLSHDGTLCYKRHFNGSVTEWAEWTTCVEGEQVRARVCQQGFGPNADCVG
EELTQVKACQNEEQKPKSNPPSQSIFVKRKSDENMTSSKLIARDVTQITC
VLKCKVIGWCRKSGWKAAKDGGMLGICFGFDGVDAPDESLKIFQNVIVFD
NPTCAP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036816XLOC_036816Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058428TCONS_00058428Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 77..127
e-value: 2.7E-4
score: 30.3
coord: 168..216
e-value: 0.87
score: 9.8
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 73..126
e-value: 6.9E-10
score: 38.6
coord: 164..213
e-value: 2.5E-4
score: 20.8
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 80..126
e-value: 1.9E-7
score: 31.1
coord: 170..212
e-value: 0.0025
score: 17.9
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 74..127
score: 10.822
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 165..216
score: 8.655
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 71..126
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 164..211

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058428-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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