XLOC_036582 (gene) - C. hemisphaerica

Overview
NameXLOC_036582
Unique NameXLOC_036582
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_304:262966..272166-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036582 ID=XLOC_036582|Name=XLOC_036582|organism=Clytia hemisphaerica|type=gene|length=9201bp|location=Sequence derived from alignment at scaffold_304:262966..272166- (Clytia hemisphaerica)
GAAAATTTACGACAGAGAGAAGGATATTTTTTGGTCTTACCTTCAATGAA ATATCCATATTCAGAGAGCAAATTAAAACCCATACAAAAGGTTTGTCTAA TGGGTGCTTTTATATTCATGTTTAAAGTGAAACAAAAACAGCAAAAGATT TTGGAAACAAAAAATGGATTTGTAAAAATTAAATCTGTTCTACATATTTC AAGAATTAGGGCTGTTGTTTCTTGGCATTATATCAGATCATTGCCGTATC ATTATATGATGTATAACTCTAAATTTATCATTTTATTCTATGGTAAGAGA AGGGGTCACAAAGACTGGGGTATCGATACTTTTAAGAATAGCCCTGACTC CTATCAAATACTTTGACCTGTTTGGAAAAATTCTTATTGTTGAAACAAAT TTTTATTGCAGGTCTTAGTCCCGACATCGCTCAACGGCAGCACGATGTCA AAGAAGATAAGCTTCAAAATCTCCTTCAGGCTAAACACTTCGTTAAATTT GGGGCATCAGTTTATGTCAAAGAGATCGTGACAAAACTCAAAAGCAGGGA GGATTTTAAACAGTGCGATGCTTTTGCAGCACGGAATATCCTCATGATAT TCACTTGTTTTGTCAATGGGCTCAGGTAAAATATTTGTTAGATATATCAT TCTTTCAACTAAAATCATGCATCGGTCAAACTAAACTTTTTTTCGAAGAA TAATGTATTTTAAGAACTTTTTCGGGAAAGAGCGAGAAAAGGTAAAATTT ATAGCCGAAAGTCAAAAATGGGCTAGCAACTTGGCTTTTGTTCAATCAAA AAATGAAAGCAATGATTGATGCAATCAAATAGAGCTTGAAATTCTTTTTA CAATATATTGCACCAAGTCTCCTACTCAAACTTACAAAACGTCACAGTTA TTTTTAGAAACAAACCCTGTCACAATGAAGCTAGTTATCAATAAACTCTG TTATTTTTACATTCTGTTTTGTTCTTATATTTTAATCAATAGAACTTCAA ATTTAATGAACATGAGCATCCAGGATTTCGAAAAAGCCGAGTTCGACAAA GAATTCCATGCATTTGTCTTGAATAATCGTTTATATAAAACAAGTCTTCT ATACGGCGCAAAAATCATTGTGCTCTCTAAAATACTCCATCGAATGTACA AAACTTATTTCAAGAATTGTCGCCCTTTATTGTCAAAAGATGAAGGTTTC AGTGATGCAAACAGGTATATTACTACTTTCATTGTGCCTTAAAGTTAAGA CATCGAAATTAGTAAAAAAACATCTGATATTCGTTTGCCCTAGCCTGGTG AATTTACTTAATAGCAACAGAAAAAGACACCTCAATCGGATGAGCGTACT GTTTTGGTGCAAGAAGTGATTGGTATCTCATGTGTTTTTACAGGCCAATC TTTCCGTCGAGCAAAAGTGGGGAGGCTTTGAATCAAAATGGTATCTCAAA AGCATTTCAAACCACTTTTGAAAGATCCAAGATTCTGGAAGGCACCTCTC GATGAACTTGAGTCCAACACGAATCCGAATCGCAATAGCCACCGAATTCG CTCATCACAAGGGTAACATACTATTCCTTTTTTTTTAGAAATAAAAAAAA CTGTGCGAGCTGAAACAGATTCAAAGCAACCCAAGGCACCAATACAAAAA AAAATCAATAACGTTCAATAAATAAATTAAAATTAAAATAATAATGTTCA AAATTTTACTGTATCATCAGGTGAAGATTACAATCGCTTTGCGGAGGTGT TTTTAAAACACCGCCCATCAACTAGCAAGAAATTCTATGTACAACGCTTC ATGCACCGTGATGCCATCATGATGAGCATGAAGTGTTACGATGTAAGGTC AATTTATTTTAATTTTCAGATATGTGAATGCTTCTATATTCATGACGTAA AATACTTCTTTTGTGGTCTCTATAAAAAAGATGTTGTAAAAATCCTAGAA ATCTCATTAGATAATACACGATTAAGAGATTTATTTCTGAATGTCAACTT TTGGTTTGTTTCAGGTCTTTGAGATTGATAAATCATTGCGTGATGCTGCC ACTTCTTTTACGAAGAGTGTCTGCAGGATCAAACCAAAGTCAAAGAAATT ATTTGAATGGTTGAAACAGAACAAAGCCATCATCAAAGAAGAGATAGGCG AAACATTCACGGACGAAGAAAATGGATCAGGAGCTAGGAAAATTATTATG TAAGTAAATATTTGATCTGAATTTCTTTTGAAGCGTTGTTTGAACATTGA ATTGAATAGTTTAACTAATTGCAGTGTAAATTCCATGTTAAAGTTTTGCA AAGAAGGGTTATTTTATATCCTAGAATTATTCTTNTAAATTCCATGTTAA AGTTTTGCAAAGAAGGGTTATTTTATATCCTAGAATTATTCTTCTATTGC GATTAGTTTTGAATTATATATATTTTTATTTTTATTTTTGTAATTGTGGG ATTGTGTATTTGTTGTTTTTGTTTTTTTCGCTGTGTTAATTGGTTGGTTT ACCATTTTTGTCCTTGTTGCGTTGAGTTGGTGAAATAATTTCTTCATTTT TTGATTTGACTGTTTTGGCATATAACTTGAAATGCGTTGTTTCTGAGTTT TAATTAGCTTTTTCAGATACAGTATAATATCGCTCCCTTTCATCTATTTA CCTGAGTCGAATAGTTTATAGTGGCCAATCACAGCTCCAATTCCCTTTTT TTATTTTTTGACGATGCAAAAATTAGTTGTTTTTCTCTTTGCAAGTTTTT TATCCATGGAATCACTTGAACTTGCTTGGCTGCTTAAATGAATCCCTGAT TCATTTTCAAATAAACTGCTTAATTTCTACAGCAATCTGTTGGTAAGCGT GTTGAATTTATTTTACTCTTTTTGTACATTTCAGCATCAACCAATGAAGA CAAAGAAACAGAAAAATCAGTGAACAAAATTCTGAATGAAGACATAGAAC TTCCTTCTAAAAAGGCAAAAGTTGATGGTAAGCAATATCTTTTGAAAATT TTTTCTGATGATAGAAATCTCTAACGAAAAACAATATCTAAGTTGATAGT TGATATTGCTAAACTACTTCAAAAATTTTAGCTGCAACCACTAAAGATCG AAAAAGCGAAAGAGTGGCGGAAGAAGATGAAGAAAGAGATGAAGTTCCTT TAAACAAAACCAAAGTTGGTAAGCAATGTCTTTTGAAATTATCACCTGAT GATATATATATCTAACAAACAATATCTAATTTGATAGTAGATATTATGAA ACTCTTTCATGAATTTTAGCTGCAACCACTAAAGATCGAAAAAGCGAAAG AGTGGCGGAAGAAGATGAAGAAAGAGATAAAGTTCCTTTAAACAAAACCA AAGTTGGTAAGCAATGTCTTTTGAAATTATCCCCTGATGATACATATATT TAACAAACAATATCTAATTTGATAGTAGATATTATTAAATTATTTTATAA ATTTTAGCTGCAACCACTGAAGATCGAAAAAGCCAAAGAGTGGTGGAAGA AGATGAAGAAAGAGATGAAGTCCCTCTAAAAAAACCAAAGTTGGTAAGCA ATGTCTTTTGAAATTTTTCCCCTGATGAAAGATATGTCTAACAAACAATA TCTAAGTTTCTAGTTGATGTTGCTAAACTCTTTTATAAATTTTAGCTGCG ACCGATGAAGACATTGATGGTGACCAAACCAAAACCAAAATTACAGACAG AGATGGTAAGGAAGGCGTTTCTTAACAAATCTTGGTTCACTAATGTTTAA CCTTTTCAAAATTTTGGATCTTCAGACTAAGAAACAAATCTAAAGATTTC AAGATCTGGATAGGGATTGTATGAGGGTATATCTCAGTTTGAACTTAACC CTAACTTAGCAAATTGAATATTATTCATCCCTATTATCTAAAACTTGAGT TCAACTTAGTATAATGATTCAATCAGACTGTTTTAATTCTTCTTTCTTTT AGACAAACATGATATTCAAAAAGGTGTTGATTTTGGTATTCAATTATGTG TTGACAGATCTCCTGGCGTAGTGATTGGTATACAATAGTTTTAACTTTTT GGAAGAAAACAGTTCACAATATTTGCTCTTACGTTTCGTAGGACAGGTAG TGAAAGGGTTTTTAAAAATGCCAAAATGACCCCTGTTATCACCTTTGAGT GGAATTCACAATTCAGTGTTCGCAATTCTTTTAAAGCTAATTCTGATGAA GAAATATTTCGAAAACATATAAATGTTGGGCAAAGTAAGACTGAATAAAA GGTCACATGAAATCTGAAACTGCTTAAAGTATGCAAACTGACTTGGTATT AATAATACATTTTGCCATTTTCAGAATCTGTCGATGAGAAAACTCTTGAA GCCTGCAGCCTCGGCTTGATTGAAAACCTGTTGAGGGAAATTGCAATCGG TATGAATTGATTAAATTTGATTTTCATTTTACTTTGAATATATTATATAT TTAGAGGACTAATTACCCTTTCATTGTAAGATCGTCTCTCTAAGAAGAAA AGAATTCAGCAATTCTTATGCGGGTTTGTAGTTCTGACAGGAGAAAACAT TTTTTTTCATATAATATATCTTTTCTTGTTATTTTTGTCCTCAAACGATG ATCTATTTTAAATGAGAATTGAAACTTTGAAGATTTGTTTCCTGGTCTTG TGGAAGACCATAGAACATCTCTAAATCTTCTGAAATGTCTAAAAGGCTAA AGGAAGCCGCAAAAAGGGGTATTTTGAGGTAAGTTTTTGAAATGAATCCA TTTCAAGCCATAAAAATAATACAGACCCGTGTTCCCATCTTTGGGGTAAA GGGACTAAGAAAAATTTAAAACTATGGATCCTCAGCTTGCTTCCTTTCAC TCCTGAGAAAACCTTCCTAAGATTGTTTTTTACAATTCTCTTCGAATTTC TTCCTTAGACCTTATCAATGACGAGAATAAAAGGTTAAACGAAAATTTGA AAAAGTATTCTGATACTCAAGTAGGTACGTAGCAAAGTTTTAACTTTAGT CCCCCCTTTGAAAAAAGAAACTAAAGTTAACATCGGGTTCAACTATTAGA ACTTTAATCAAATGCAGTCGTTAGACGAATGGGTTTAGTTCTGGCTGCTG ATGTGCACCGGTTCCTTAAAGACTTGATTATTTTTAACTTTGGTTTTACT CTCTATGCTACCGTCAAGGGCTAATACGTGATTACTGAAGCATCAATTAA TTCATGATGACTAATTATTTAGTTTATAATGATTTTTTTCCACATTTAGT TATTCCAATCAGTGTTAAAAAGGCTCATTATATTTTCAACATTTGCCAAA AAATGACGTTGCAAGATATTGCCAAACATTTCTCCAACCATCGCACATTA TTTAAACGTTTTTCCAGTGGGCAATGCGAGTCGTACAGATATGATGCATA TTTTGGTATCCGCCCAGAGTCAACATTGATTAAAGTAAGTCAAGAATGGA CTGCTTTTTGATGTCAGCCCAAGCTGGATCTTTCCAAGGCACTTAAAATA ATATTTGATTTAATTATATGTTCCATTTTGAAACCTTATAGTTGAACAAA GCATATATTGTTCAACGAACGGAATTAAGTTTGTACATTGTTGAGGGTAG ATGGGATAGGTCTTTTAGGGTAGTTAAAATATTTATCTAGGGTTCATAGC ATTTTCCTAGCATTAAGTGGTTTGTAATAATACACTAATAATATAAATTT GCTTTTGGACAAATCATGTATAAAATTGCTCTGATTAATGTTCAATACGA CTTTTCACTTCTTTTGAAGATCGTAAAAATCAGTGCATTTCTATGCTAAT TCCAATATTTTAGGTTTTACTATTTTTTTCTTCAAACTGATACTATTTTT AGCAAGGAGATTGTCGTATGAAAAGTGTGCGCATCAATATTCTCCCAAAC ATGACCTCGACTATCATTGTCCATGGTGAGTACTCCTCAAAGATCTGTTA ATGTTCGTGCTTATAACTGTGTTTCATTTTCAATTTGCATTCTTCAAAGT TGTACATACTGCGAACAATATTCATAGTTTAAAAGGGGAAGTAGAGACTT AGCCAAAATTACTTGAAACTTTAGGGATTACTTTGCAGAATGTACAAATT CAGGGTCATGGAATTAAGTCATTTTACTAGGAGGTAAGTAAGTAAAGGTT AGACCTCCAATAAAGGGAGGAATACACACTCCTATGCACTCTACTAAATT CACAAAAGTAAGTCACTGTAAGATTAGGGCATAGAAAACATAATGAAAAA GAACAATTTCTGGTAGTTTCAGTTCACTAAAGGATGATTCTTCATTTTAG ATGTGTTGCGACCCGACATTGAGCAGTGTCTAAGCGAAAAGCTTAAGAAG TGTCTTCCTCCATCGATAAAAACAATGGCCATTGAAACAGCCAATTTTCT GATGTATGCACTTCTGCCATATGCGCTAAAGGTCATTATCATGGAGGAAG CCGACCTTCAACATACGGAAGCTCAATATTTCTTAGATTTTTGGGAAGAC TTGCGACACAAATCTCCTCAGGAAGGCAATGAAATCGGTAAATTTTAGGT CCTTAGTTTTTGTGTATATAAATTCGATGACTATTCATGTTTCTTTTAAT GAAACTTTAATTTTTTGTTCTTCAACTCAGACTAAAATACTTTTTCATTG CCATTTTAGAAGACGAAGAAGGAGAAAGTGATGAAATTGACGACTACCAA CCCACGATGATCGCTAAAGAGGATCTTAATATCAGTGAGTTATCCCTTTT GAACACTACCCGTATTTTGTCACTTCAAAGTGCCATCAATTTCTTATTTT GTTTCATCTTGGTTCTTGGGAATTTTAATATCAAAGTGACAAAGTTTGGT TTAACAAATTTCTTGGATTCAAAAAATTTATCAATTGTCTTTTTAGGGTG TGGTTTGAAACCATTTGAATCTGGTAAGTTTTTTTTATCTGACGTATCTA ACATGCTACGATGCTAGAAAGGAACTTTTCTTTATATACTTCTTCATATA CTTTATTTTCTTCATTTTTTAGAACAGCAGAAAGAAGTAGAAGGGGGAGA CGAAGTAGAAGAAAACTACCAGCTGCCTAGCATGACACATAAAGGAAACG TTTGTTGTAAGTTATTCATTCGTTTTGAACTTTCCCTAATTCTGTGTTAA CTTTTTGGATCAGCGTTAAGCATATAAAGCAGGATCCTTTAAATAGAAAA TAGTAGGTCAATTTGATTTTATTTCAATGTTCTTTTAATTTTATTTTTAG TTGCTAATGTCAAACTTGATGATATCATGGCCTCTAAAGATAAACCTGAA AATGAGGGTCAGTAACAAAAATTTTTAACACAAAGTCAACATTAAACACT ACCTTTCATTTACTTTATGTAATTAATTTTCTACAAATCTGAGCGGAATC CTTTGTCATTGCATTCTTAGAAAATCAAAAAAAAGAAGGAAAAGAAAAGG AGAAAATGAAAGAAGTAGACCTACAAGAACAAGAAGAAGAAGAAGAAGAA GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAA AAAAGAAGTAGGAAAAGTAGTAGACCATCAGCTGTCTAGCATGGTATCTA AAGAAAATCTGTCTTGTAAGTTATCTGTTGTGAGCTTTCCATCATTTCAT TTTAACTTTTTTGATCAGCGTTAAGCATATTAAGCAATATCCTTATTATG AAAATGAGATATTGTCTCCTTCATTTTAATTCGATGCTCTTCCTATTTTA TTTTTAGTTGCTAATGTCAAATCTGATGATGTCATGACCTCTAATGATAA CGAAAAGCATGATGGTAAGTGGTATAAATTTTTATTGTTTTTGACTCAAA GTGTCAAACCCAAACGGTCATATTCTTGTTACAAAAAGACTGCATAACTG CCACTTCTACAGCAACCACTACGACTGAAAACGTCTAATTAACATTCATG TAGTGTTAAATGTATATGTTAGATATATTCATAGTGGCTCTGGATCACTT TGGTTAGATTGTAATCAATTTGACTATATCAGACCTGGAAACAAATCTTC AAATTTTTCATTATTGCCATCTAATCAATTAAAAGAACACAGGCATATTT GAAAAATTCTGTCTTATTTACTTTATTTTGTCGCTCCAGCATATTTTGTC CCAAAATCTCTGTCTCTATCATATAATAATTAACTAACGTGAAATTGCTA CAAGGTGTTTCATTCTATTCGATCGTCAGGCTGTTCGGTTTCGTTTTTTG CAATATACCGTTTCATACTGAATTTACAACCTTAAAATTGCTATGTGCTC TTACTTGCTTAATTATCCCGAAAAAAGGTTAATTAATTCACCTTATTTTA TATATTTCCAGACTTAGCAAGGCCTAAATACCGACAGGAGACATACGATC CTGAAGATTGGCACAAAACCAAAGTATTTACACGTACTCAATTGCTGGTG ATTCTTTACATCGTACGAGAGGAATTGGGCGAAAAGAAGTTCGTTGGTTG TAAAACATTTTATGGACTCCTTAAAAAGGAGTTAGACAAAGGATTTGGAC GAGCTACGTTTTTGCAAAAAAATGTAAATTACAAATGGGTTGTCATCAAG GAGGTGCTGCGAAATATGACAATAAAATTGAGGAAAAATACAGAGAAGGA ATTGAATGGTTTTAAGAATATGGTCTATGACGCAAGAAGGCTGTATAGTT ATGATCAACAGCATTAATATTTTTTATATGTTTACCTACCTTTCTACAGT TTGATATTAGCCGAATTTTCTAGGTTTATGTTTTATAAGATTTTGTTAAA AATATGCCTTGAAAAAATTACAGCGGTTTCCAAGCAAAATAACACAAAGT AAAAAACTCCGAGTTAGCTTACGAGTAATTATGTTCTTTGCCGTAAATAT TAATCTTTGATGCTGCGCCAATGATACCACTTCGTTTACATTATTTATAT TTCTGATTAAATTACTCTAAAAGTCTTTAATTTTTGAAAATTATTGAACT TTTCCGCTTCTTATTAGAACTCCTTTTTTGTTTTTCTAACTTTCTGTTTT TAAGTTGAAGTTTAGTGTAGTCAAGTGTTTTCAACTCAAAAATGATGCCA CGTGACATGTCCTTGTTAATATTTGTGTCGCTGCAAGCGATTTAGAGCAC ATTCAAGATCGGCCAGGATCGGCCAAGTAATTCTACGGCCAAAATCGGCC T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058057TCONS_00058057Clytia hemisphaericatranscript
TCONS_00058056TCONS_00058056Clytia hemisphaericatranscript
TCONS_00058055TCONS_00058055Clytia hemisphaericatranscript
TCONS_00058054TCONS_00058054Clytia hemisphaericatranscript
TCONS_00058053TCONS_00058053Clytia hemisphaericatranscript
TCONS_00058052TCONS_00058052Clytia hemisphaericatranscript
TCONS_00058051TCONS_00058051Clytia hemisphaericatranscript
TCONS_00058050TCONS_00058050Clytia hemisphaericatranscript
TCONS_00058049TCONS_00058049Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058054-proteinTCONS_00058054-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_304supercontigscaffold_304:262966..272166 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43 0.39 0.11 0.04 13.77 12.91 9.59 15.18 5.97 6.01 4.31 4.61 3.1 3.12 1.37 1.66 1.7 2.01 1.64 1.49 1.42 1.17 0.81 1.03 1.92 3.88 0.93 0.53 0.35 0.45