XLOC_036531 (gene) - C. hemisphaerica

Overview
NameXLOC_036531
Unique NameXLOC_036531
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_302:378642..383205+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036531 ID=XLOC_036531|Name=XLOC_036531|organism=Clytia hemisphaerica|type=gene|length=4564bp|location=Sequence derived from alignment at scaffold_302:378642..383205+ (Clytia hemisphaerica)
aataaaattttcttgagaaagattttttcccacagaaaaatataaaatca gtTTCTTGGGGCAgtcaaattttcatgaaaagaaATTCTATGTAAAGATA AAAACAGGAGCGGTATATACAGGTGATGTCAATATGATATCTAGTTTATT GATGTTTGATTGACTTAAATATTAGGATATTGCATTATTCAACCAAAGAA TAGGACTATGCTACAttatttaaatatttcaaaattattcttCAGGAAAA TGcatcgttgaaaaaattattgcacGCATCAATGGAATGAGGTTGGGTAT CGTATTTTAAAACAGAGACATACGATTATCAAGTATACTTCATATCAACA ATAAAACATTTAATCAAGGCAAAAAGGTTGTGTGACTCTTAACTCCAGGA CTTAATAGTGGTTTTCAAATGTAGCCTCTGCTTTTCATggcttttcaatt tctttttgaaatttgttgattTAAGCCCTCCCTGGAAACAAACTAACGCA CATAGTTATGGAGGATTGACCTTTCTTGAACTAACATTGTACTGCAATCG ACAAAGTATTAAAAACAGTTCAAGATTAACATGGACCACCCCTTATTTGT AAATGGTGTAAAAATACTAAACTTTAGTGTGTGATTTCTTATGATGATCA GTTTTCACTCTTATCTCAACGTTTTGCTTCAGTAGGTTGTAAGAAGGAAG AGAGAGACACAATTTTGGTCTACTACCCACTAGAAAATGGTAATTTTTAT TTGGGTTTTTTGTTTTAAACCATGCTACATTTGCCTGCTTTTCATTTCCA TCTTTTCGGTTTCTTAAGCCAAGAAGAGTATACTCTACACAAAGGAAAAT GAAACGGATTTCTTGCGATCTTCTTTTCTATTTCAGAACACAGTTTTACT CATCCTTTTTTCAATAACAACTGGAGCATCATGGGTATCCACAATGCATC AGGACCGCATCAATGCATTGCACGAAGACATGGACGAGGTTGATCCCCAT TACTACAAACCACTACCATTGCCCTTGAAAGATGCGATAATTTATGTCAA GAAGTATGGTCCGTATGCAGCAGAAAAGAGAATTAAAGTGAAACGGAGAC ATAGCAAGAAATCGATCAAACTTATGGAATGCAAACAACGTGACCGACCT CCCAGTAAGTCAATATACTTCATTTTATGCTAGTATATTTTGGACAGAGA TAATACTTTGATAGCATAAAAcgcttttatttaaaaaaatattactgAAG CGGTAGAATTTATTACCCAGGCTATTGCTTAAATCTCAAAACGGAACATT AGAATTCAGGACCttgtttcattcaaaaacactttcaaaattgatataat ttaattttctcGTAATTCCTCTCAAAAAACATAATTCAATCAATTTCTGC TTTTTGGCTTATAAATCGAAATGTTAATTCAATCAAATATCCCCGACTAA ATACAGGAAGGAAAAAGTCGAAATACAGATATTAAAAAtcttatcggcga tccaaaaaatatctgcagtCTGATTGGTTGTAAACAGTACgatatatttt gtattttacatgtacaaaatataaattgacgaaaagatgttgttgcattg tagtgGGAGCAGTAAtctaaggcgaaaataaaaaaatgtagtgtttctgg aatgcgggtgaaggaaaaaagctctcatgcgggcCAAACGACAACTATTA TAAACGATACAAACTATTACTTATTGTCTTAAGGGGGCATGTTGTAAGGC TATCTGAAAACAGTGAAATTtggacgaacgtactttttgaatgcccCCCC TCCCCCAATAGTCAATAGTAATATCTAGAACCGTTTTTCTGATTCAAACA TTTGCAATTAAAGCATTTTTGATGACTTGTGACTAGAGTCTCTAAATTTA AATAGTGGTTGGTTGGATTCGACTGAATTGACATACTTATGCCTTGGGCA TACTTGCGCGAACGTTTAATTATTAATTATAGTGAGTGCTATGTTCTTAG TGTGCACATACTCTCGGGTACCTAATAGCCGTCCCCCCCCCAATATTTTT GAAAGTTCCCTCTTTTGTCCTAATTCAACTGTATTAGTATCTTTTTCAAA AATTTTCCACCCAGGACATTTTTATTCCAACCCCCACCCTGCTTATTAAG TTTTGAGATTTTTCCAACCCCCCCCTCCCCCggctattaggtacccgaga gtacttgtTACAAACCAACTaatgttttttaaatgatcaatttggtctat aagatcacaaaaacgagtggtgagaaaaattcGGTCCccatatgacgtca tcatttgcttaggcttgaaaatgaaagtgaaaattacaAGCTCAAATATG GCTCAGATGAAAAATATTCATCCAAAGATTAAACAAATATCACAACattt atctgaaaatgaatacacgtttttttttttttaagaaacacacttttaag aaacatgaggctcagaatgcctaaaaactaagaaacatctaagaaacatg ccgaggctgagaatgagaaaataacatttttaaaacggtttttttagaac cttccaatctttgcgtgaaaaataggctgattatgtcaaaaagtttagaa acatgtaagaaacatttaaggctcaaaaggccgatttcttaagaaacatt gaggctgcttggtaaaactagtttcttaaaaaaaaaaaacgtgtatttga aaAGCAATAACGGAAAATAGCTCAAATAAGGAGTTCAACTTGACGTAATC GgtaattaaattgaaaatattttgttttatttgaaaGAAGATCATCTAGA GAACAAAAAATATCTCCAAAATGGATATTCCCTATGACACCgtcattaaa ttttattttcagaatGTGAGCGTCAAGTGAATGGTTGTGGGTCGGGCTTC ACTGAATCTGTACCTCTCCTCTTTCGTGATAAGTTTACATCAAGCTGCAA CAAACACGATGTCTGTTATGATTGCGTAAGTCTGTCTCGAAAATCCGCTC AAGCTGCTTTCGATTACTTTCGTTTTAATTACATTCACAGTTGGAATCGA TATCAATTAAATTAGTCTCTTAAGCCTTTGACATGATTTGACCCTATTCG GATTACTAAAATGGTATTTTTAGTCAAACAATGTTCGTGTCTGAGGCGTA GTGGTGTCGTTGTCATCGCTCTTAACTCCCGTCTGGGTGGTccgagttcg attcccactgtagtactacggttcacttggcaagtgaacataacttcgcc cgggtcaaaccataccatgtgaggggaattgtgTAACACTACTCTGATGC AAGGGTGTGGGTGATatgccagacattgtggtgtgtaTGGTATCACCACT ATGCATCATGGTATCTGTGTCTCGCGTGCACAGAACCAGCGGTGTCTAGA CAGCGCTAAGCGTTCCAACTTGAAAAGGAAGGAATTCCTACTTCGTACGG AGTAGAACCCATCCCCAGTGGGGAGGGCTCATATTATATCATCAATATTC GTGTCACAAGAGAGCCCTGTCTCACTCCCTCatctggaaaaaaatattta cccaTCGGGAACATGAAAAAGATGAATATAAATAGGCTATATAGAAAAGT CTCTTGCTTTTATGAGCAGTCCCTTGCTTTAATGTTAACCTTTGAAATGT CAACTATTGTACCTTTAGTTATGATTGTTGGGCTGAAAAATGTTTTACAT TCTGCCGGACCCTGATGTTCATACTGTTTTATCATGTTCAGGGATTTGCG AGAAACTGGACACGATCGGACTGTGATAACACTTTATACCAAGACGCTGT GGATGCTTGTGAGTGCGCTTATCCTGGTTTTCTAGCCTCTGCAGAACGTT TAGCATGCAGAGAAATGGCCGAGTCGATCTATATGGCTGTTCGTGTATTC AGTGAAAGTTACTTTAGTACACATATCAAGGACTTTTGTTTGAACGATTG TGTATTGTCATATGGAAGCCCTAAATTGAGCAATATGGTATGAAGTAAAG GATTATGGGTAAAAGACGTTCTCTATTCGCGATCAAATACATAGTATTTC AATTGACAAATGACTCTATTGACTTTGTATTGAAATTGTGTTACATTAAG AAGGAATTAATTTcggtaaattttctttttaattttgttatCAAACAAAT TAGTTCTCAttagaatttaaaaagattCATTCAatctcaccaaaattagt tcccttaaccTAAGTACCACGGTCTTTTTTTCtagatcactcgttgacca aaaatcgtcaaaaaaaacgatcaaaatctcaaaaaagtggatttttggca aatttttgcatttttttgactttttggcttaaaatctcgctggaaagact cacttttgatttttttttacttgaccatgaagcacaattcaatttctaaa gctagaaataattttttctctctGAGGTcctttattttaaatatttatga CCAAATTTGTCAAGTTTCATTTTTCCTTCCACATTCTTGTGtgaagaaat attttctatatttgtgttttttttatctaaacaTTGGTTATGAGTACGTC TGCGAGAAGATCGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057936TCONS_00057936Clytia hemisphaericatranscript
TCONS_00057937TCONS_00057937Clytia hemisphaericatranscript
TCONS_00057938TCONS_00057938Clytia hemisphaericatranscript
TCONS_00057939TCONS_00057939Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057938-proteinTCONS_00057938-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:378642..383205 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.15 1.92 2.04 2.44 0.49 0.27 0.53 0.69 9.31 3.99 13.77 18.18 24.49 22.78 20.72 21.86 3.86 6.67 23.34 19.07 16.46 12.94 36.98 46.54 11 7.8 38.2 43.75 200.93 243.01