XLOC_035879 (gene) - C. hemisphaerica

Overview
NameXLOC_035879
Unique NameXLOC_035879
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:1341205..1344964-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035879 ID=XLOC_035879|Name=XLOC_035879|organism=Clytia hemisphaerica|type=gene|length=3760bp|location=Sequence derived from alignment at scaffold_284:1341205..1344964- (Clytia hemisphaerica)
CGAGGGAAGAGAAAGCAAAGTGATGTTTTGTAACTGCCACAAATATGTTT
TTATTTTTGTCAAGATATTTTTGACGCTAATATTCTGTCTACAAGTGCAA
GGTATACAGTTTTCAACGTTCTACCTTCTAGAGGTTGGAACTTTTAATGT
GATAATTTTATGTGAAAAATATAAATATATAGCTTAAGTCAGGAGGCTTC
GTAGAACTGCTATACCAAAGCGAGTACCAAAGTACCAAAGATGAAGTTAC
TAGCATAAATGGATAAAATGCTCAATTTTTTTATTTCTCGTGTTTAATCT
TTATTTTCAACATTTTTAGAATGATTAATTTGAACAAAGATTATAGTATA
TAATTTTTGAAGAATTGGTCGAAAATGCCGACAACTAAAACAAAGATTAA
AAGTCCCAGGTGGGGGGGGGCAAATTGGGTGCTGCGTATGTGCGAGTCAT
AAGGGTTCCTTTTTCAAATCCTCGAAAGTCTCTCAAAGGGGTACAAAAAC
CATTAAAAAGCAAGNTGTTTTGTAACTGCCACAAATATGTATTTATTTTT
GTCAAGATATTTTCGACGCTAATATTCTGTCTACAAGTGCAAGGTATACA
GTTGTCAACGTTCTACCTTCTAGAGGCTGCAACTTTTAATGTGATAGTTT
AGCCTTTTACTTAGGCAAATTGGGTGCTGTGTATGTGCGAGTCATAAGGG
TCCCTTTTTCAAATGCTCGAAAGTCCCTCAATGGGTTACAAAACCAAAAA
AAAGACAATTGAGTCTCTTTAAGGGTCTAAAATCGAAATTTCCTCTCCCA
AAGGGTCATGATTTTCCAAAATTTGGACAAAAAACGAGCGAAAATGGACA
AAAATTGTCAAAAACGTCGAAATTCAGTCTTTCAAAGGGTTGATTTTCGA
TTTTTGGCTCGAATATACCCGTCACCTCGCAAACTTAGTAGCCCCCGCCC
GGGGCGGGCTTAAAGTGAACGACATGACTTTAATACCTTCTTAAAATCCC
TTTGTAAATATTTTTCCAGATACTTGTCTTTTTTTTTTAATTTAGCAGGT
AATGTTGACGCATTGGAGAAAGTTTCAACAAGATCTCCTCCACCAAGAAT
GGCGGTTGTGGCGTACCTACCAAACAATTTGCAGAAAATGTACGAGTTCA
ACATGATGTTGTACGGATCATGGAAATATGTTGAATCTCATCAACAGGTT
GAATTTGCGCGCTTTTCTGGAATTCTTGATTAGGATATTACTAGTAGAGT
GGAGTTTCCTTAATTGGAACCTCTATAATTCAAATGCCTCCTTAAAACAA
GTTTTATATTTTCTTCAGTTAACAATGTCTTTTAAACCTAACTCCATAAC
TCGCAATCTCCGTAACTCGATCATCGACTGCGTGTTTGAGCATCGATGGC
TCGAGTTACGGAGACTCTGTAAAAGATTGCAAAAGTGTAACACTCTTTTT
ATCGCATACTTTAGACTATAACTAGAAAACTGTATAGGGGAATGAATATA
CCATCAGAGATAGCAGGCTCTCAATTCAATTCTAAAACCAAACCAACTAA
AAAAAGTGAGACAACTTTATGTTATACTTAAACCATTTTGATTCTCTCTC
TTTGCAGATCTTCTTCAATCAGAATCCTAAACCGTCTATCAATCTCATCG
ACCTGATTGTGTTTTTTGACCAATCATTTGACGAACAGATACCAGTTGAT
TGCCAAATTTTCCGTTACCATGGAAAAGAGGCTACTCGTCACCAACTCTT
ACAAAACGACGCTACCTTGAATTCATTCGTCGATAAAAACAACAACAAAG
ATGCTTCCGAATTTCGTCTTCAACTTGATCAGCTGAAGAATACAAATCAT
ACGAAAACACGGATTTCCGAAGATGAAATCATGTTTCGGTCAGCTTGTTG
GAGAATACCTCAATCGAACAATACGTTCAAAGATGGATTCTCTTCATTGG
ATAATCTCTTACCGTTTCTTAGAGAAGGTATCGACGAAATGTTTGAGGAA
TATCAATATATTCTCAATGTAGACACTGATTCGATACTGACACCAGGGCT
ATGGACCCTCAATCTTAATCAAGTGGTCCTCGCATCTGGTGTTCAACAAG
AATGCCCTGCAGATCGTAAATTATTAACCTTACAAGCTGCAACGAAAATT
GGTTTAGAGTTTCCCCTAGGTAGACCTTGGACAACATTTTCAATATTTGG
TGAAACCAATATCATCCTGCCATTTATGTTTGAGGTTTACCGACTTTCTG
TTTTCCTTATGCATGATGACTTGAATGAATGGAATGCAAAACACGAAGAA
CAATCACATAAACAGTTGCAAATAGCTAAAGACCTTGTAATATATCAAGC
AGCAAAGATGTTACAGATTGAAAATAAAGGAAGGTTTCGCATTCTAGATT
CATTGCCGTGTTCCAGAAGCCATCAAAAAGGTACACGAAGTGTTCTGAGC
ATTTCTGTAAAGAAGGACCATAAATGTCGTTTCGATAAAAGTCAATTCTT
TAACCTTCTCGCGAATCTTCAAACGATGACCCCGGGAGAGAAAAAAGATT
TTTTAAGCCATGCTAAAGAAGAATGGAATCACGAGCAAGCCTCAAAACTG
AATCTTGAAAACTATGCCAAATTTATCGCGTATAAGTATGCAGCGATTCA
TTTTAGTGAGATCTTTAAATTCTGATTGCAGTCTCTGATCATCGTCGAAA
TTTTCCTATTCCCAAGTTAAGCAATATTTTTTTAACTCAAAAATATTCTG
ACGATAACATAATGTGTCATTTTTGCGCCAGTATGGTAAGTGGCCTAGCT
ACAACTTGCACTTTTTTTGCCTGCAGATATCGTTAAAAAAAAGATTCAAA
GTATGAAAAATATTGGTGGTGAACCACAGTAACACGGGCCCCTAACACCA
TTGTGTCGCAGACCCCCTGGGCCCTAGCCCCACTGGAAAATTTCGTCCCC
GGTAGAAAAATACGTTGGAATTCACTGGGAAATTGTATTTGAGTTCATCC
CCATTCGAAATCTAATGTTTAAAAATTACACTCCAAAACCAATCGCACTG
GTTTTTTTAACCTTGGAACAATGGAATTTCTATCCCCATTGGGGTTTCAA
TTTTATCCACACTGAGGAAAAAAGTTCCACCGGGACTGTGAGACACGGTT
GTGCATTACCAAGGGCATCAAAAGGCTCCATAAACCTCCTTCACAGTGCA
AAGGTGGGTTTGATGAAAGGTATTCAAATTGATGAAGGACCATTCGCAGG
TTCGCATAATGGAAAGGCTTATACCGGTTTATACTGTATTAGGTTCGAAC
AATCTTTTACTCAATCAAGGTGCTTTAGTCATTTTAAACTATTTCAGATT
ATTGAAAATAAGCATTATTAATGACTTTCAGCCTCGTTTAGAGGGTCCCC
AATTCCACAGTGCCGTCAAATATTTCTTGATTTCTCAAGAAATTGTCGAA
TTCTTTTATTCAAATAGATTGGTTTTGAGTAGAAATTAGTTATTGATTTT
CATTTTTGAAACCCCTTTTTTTAGACTTTTGGGGCTCATGACGTAAATTT
ATGTATTGTCTCTATGTAAATAATAAAGAAACGGAGAATACTTTTTCGGA
TTATTTTTTTAATAAATTCACACATATTACACGTTTTTTATAAGAACATA
AGGCTTCGCTGGCATAAATGTTAAGAACAAGTTAAGAACATTTAAAGGCT
TTGCGGACTCAAAAATACGCTATTTTTTTAGGAAAATGGTCAAAAATATT
TACAAAATAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056977TCONS_00056977Clytia hemisphaericatranscript
TCONS_00056976TCONS_00056976Clytia hemisphaericatranscript
TCONS_00056975TCONS_00056975Clytia hemisphaericatranscript
TCONS_00056974TCONS_00056974Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056977-proteinTCONS_00056977-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:1341205..1344964 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0.08	0.09	0.09	2.51	2.39	11.74	10.45	4.96	5.08	3.98	3.67	3.14	3.4	2.76	3.59	0.18	0.31	0.33	0.22	1.07	0.77	0.28	0.53	1.9	1.64	0.09	0.12	0.41	0.26