XLOC_035601 (gene) - C. hemisphaerica

Overview
NameXLOC_035601
Unique NameXLOC_035601
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_276:709556..714486-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035601 ID=XLOC_035601|Name=XLOC_035601|organism=Clytia hemisphaerica|type=gene|length=4931bp|location=Sequence derived from alignment at scaffold_276:709556..714486- (Clytia hemisphaerica)
AGTAAGTGTGTCCAGTCATATCAAAACAACACTAGAAAAATTAAAATTTA GAAGTGGGTTGTGTTGTCTGGATGTTGAGTCAGCACTTTGAGCAGTTATG ACATGACTATAACCGTGTTTGTTCTGTAATTCTGCCTACTTCATAACCAA ATATTATTCCAACAATACACGGTCACATCCATAAAAAGTATGATGTAAAG GTATAAACACATTTCTTGTTTCTTGCATTTTGATTTTAGTATAGTAAGAT AGTCTATCGGTGTTGTCAACAGTCTGTCCCTGTGACAAGGTACCCTGTGA CAAACAAAAACAAGAACCTGACACCTGAAATAGCTAAATACAACCTGATG GTTTGGGGGAGAATGATGGTCATGGAGAAGGGTTTGATTGTAGACTTCTC CTTACCTCTCCTTCTCCTAGCTTTTGATGTGGTGATAAACAGGGTTTTGA AGATTTCTGATTATAATTTTCCATAGAGGGGCTTTTTCATACATTTTTCT AGAATTACACAATCATTGAAGGATTCAGGGGTCATGTCATTATCTGAAAT CCAGGAGACAGTCTTTTCGAAGAACGCCACGCTCTTTTGAATAACTGACA ATTCCAGCATACATTTTTATAGTATGATAATGTCATATAATAATTGATTT GTCTTTTACAACACAGCTGTTACCAGTTACCGTCAACTGCTCTAACTTGG GACTATCTGACAAACAGCAATTCAGCCACCATTTCACCAAACCTCCAAAG TCAGAAAGTCCTTTGATTTGAGTTAATGAAGGACGTATTAAAAAATACAC GATTTCTCTTTCGCACCGAGTAGGCTTTAAATCGAAATATGAAAAAAATC TCATAGTGGAACACATGCAAATGTCTGGAAAAAAGAAGACCAAGTTAGTG GCAAAACAATCAGTCAGGCACATCCTGGCAAATGAACGGGGTGAGCATTT GCATGGGGTATTCGTCACCCAGTGTAAATGAGATAGGACGTCTCAGGCTA AAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNATCTATGCAATTCTTTGAAATGAAGCAAAATA TTTCCAACCCGGTTCAATTAAACTGGGTATTCGGCGCTATTACGTCACTT TCGTTTTCGACCCCGTTCATTTTGCCAATGGTCGCAAGTGAAAAATACCC CGTTCATTTGCCAGGATGTGCCTGACTGACAATGGAGCGTTTGACGTCAC TCGCGTGGCAAGTTAAACACTGATATTTGTTAATCCCATCAGGCGATAGG CGGTTAGGCAGTGGGCATTCTCTTATTCTCTTATCAGCGTCTGGTCATTT TGAATAAAAAAAAAAAGTTAAAAAGGGCGCGCTATCCATCAGTGAAAGTT ATCGTGACATGTTATGACAGAAAGTATGATTGATTAACTTGGTGGAGGTA GCAAAACAAACTTGTTGTCAAAGAGATTTAACAGTAAGTGAAAATACAGA CCAGAATATCAACAGTCCCTTGTTTTGACCAATCGCCCCAAGTTAGAGCA GTTGACGGTACCTAGAGACAAGATGATTTAGAGTAATTTGTTATTCAGAC TATCGCGTTCTCCTAAACAACTATTGCATTCATCAGAGGGACAAAAAGAT TATAATAGTTGCTTGGGAGACCACAACGGTCTATTGCATAACTTATTACT CCACACTTCAGTGGATACAATGGGATAAGTAAAGGAAGCGAGAAATTAGA TATGACCTATGAATAAGTTTTGTTCAAATTGGCATGTTAACATTCTCCCG AATTTGCATGCGATATCACTGCGAATCTTCTCGTGCTGCGTCCTATAAAG TATTAGCTGAGGTAGTAGGGTTATATTTCCATAAATTGGAGCAGATAATT TCCGGTCCAAAGTGTTTGAGTAATTAATATGGGGAACTGAGTCAATAGGT CGTTGCGTTCTCCTAAACGACTATAAAAAGAATAGCAGATTTGACCATTA TTTTATTGCCTTTTCGTGATTTATGCAATAGACCTTTCCTGTAATTCCTT AAAAACAAGTACTATATTTCTTTCCTTGAGTTATCATGATTTGAAACCAT TTGAAAAATACCTCTCTAGTTTAGTATGGCAAAGACTTCATCACGTCCTA ACAGTACTTATGATGACGGTGAAGTTATTGGATTGCCAGTGAAGTTTGGC AGCGGTAGATGGAAAAATACTAAACAAGTGTCAGGAACAAGATTCAAAAT ATGTTTATGTGGAAAAAGCAAAGTTGGAAAGACATCAATCTTTATGAGAC TTCAGGGATTGGATTTTGCAGAAGATGATCCAAACTGTCCCATTTCAAAT TTTGAATTCAAAGATGAGAATGATAGTACAGTAGAGGTAAGATTTTGGAA ATGACCAGAGAAAAAGTATATAACATTGAACCCAGTAGACTTGAACTACA AAGCGCTTATTTCTTTTTTAATTGTTGGGAAAATATTCTTATTAGAACAT AATCTCGTATCTTATGTCAATATTTCTTGTAGCCTCTTATTCACAAATCA AGCTTTTTCATTATTGTATCTTTCCATTTCAGTATTCTATATCAGATCCG GAATCTATAGACATAGACTCGCTGACATTTGGGGACCATTACCGAAATGC ACACTGTGTTGTATTAATATATGATGTCACTGACTTTAGTTCTTTGGATT ATTTGAGCTATGAAATAGAGAAAATTGAAAAAAATAACTATACTCCATAT GCTAAATATGTTTTATTGCGAAATAAAATTGATAAGAAATCATCAAAACA TATTCCTTTAGCTAAGCAAAAAGAATTTTTTGCAAACAGTAAATTGCGCT TAAAGATTGATCATGTAGTTGAAACCTCTGCAAAAACAAATGAAGGCATA TTAGAATTCTTCAAAGAAGAACTGCCAGAATTACTAGTACTCCCGTCATC AGAAAGCAAAGTTAAGGCCTTTGATCGCCTTGTTAGTGATTCCCAACAAG GGCTAGATGCAACTGACTCTTCCCCTGGTGGCAGAAAAAAGAAGAAGAAG AAAAGGATCAATTGTGCAACATCATAAGAATTTCATAAAGATTTACTTCA GAAAAAGCTTCCAGAATTTTGTTTACAGAAGCAGGCGTTTTGCTTTGTGT TTTGCATGGATGGCAAATGACAAGGTAAACTCTGGGAGATTTAAAGAATA ATGCAGTAGTATTTTTAGTTTGTTTTATATTTTTGCTTTTTGAAAGCACA GGATAATAAGTTATGTTTTAACTCTTTAATATTATTAGCTCTATAAGACA GGCTATTTGATGAGAGCACTCTACAAAATGACTTTATTGACTTTCCATAG CTTGTGAATGTGATGACNCCAGAGAAAAAGTATATAACATTGAACCCAGT AGACTTGAACTACAAAGCGCTTATTTCTTTTTTAATTGTTGGGAAAATAT TCTTATTAGAACATAATCTCGTATCTTATGTCAATATTTCTTGTAGCCTC TTATTCACAAATCAAGCTTTTTCATTATTGTATCTTTCCATTTCAGTATT CTATATCAGATCCGGAATCTATAGACATAGACTCGCTGACATTTGGGGAC CATTACCGAAATGCACACTGTGTTGTATTAATATATGATGTCACTGACTT TAGTTCTTTGGATTATTTGAGCTATGAAATAGAGAAAATTGAAAAAAATA ACTATACTCCATATGCTAAATATGTTTTATTGCGAAATAAAATTGATAAG AAATCATCAAAACATATTCCTTTAGCTAAGCAAAAAGAATTTTTTGCAAA CAGTAAATTGCGCTTAAAGATTGATCATGTAGTTGAAACCTCTGCAAAAA CAAATGAAGGCATATTAGAATTCTTCAAAGAAGAACTGCCAGAATTACTA GTACTCCCGTCATCAGAAAGCAAAGTTAAGGCCTTTGATCGCCTTGTTAG TGATTCCCAACAAGGGCTAGATGCAACTGACTCTTCCCCTGGTGGCAGAA AAAAGAAGAAGAAGAAAAGGATCAATTGTGCAACATCATAAGAATTTCAT AAAGATTTACTTCAGAAAAAGCTTCCAGAATTTTGTTTACAGAAGCAGGG TTTTGCTTTGTGTTTTGCATGGATGGCAAATGACAAGGTAAACTCTGGGA GAGTTAAAGAATAATGCAGTAGTATTTTTAGTTTGTTTTATATTTTTGCT TTTTGAAAGCACAGGATAATAAGTTATGTTTTAACTCTTTAATATTATTA GCTCTATAAGACAGGCTATTTGATGAGAGCACTCTACAAAATGAAAGTGT CTGTTACTTATTGGTATTGAATTTTATTGACTTTCCATAGCTTGTGAATG TGATGACTCAGTTAAAATTTTAGTTATAATATCCTTTTAAGAGTTATCTA TCTTTATTATTTATGAAATTCACATACAGTATTTTTGTTTATTTATAATC ATTTATATTACGTGTCATGCAGTGCTCTACCTTATTTTTAACAGAACAGT AATCTCTTGAGAGGAATTGATAAAAATAAAAATTTTCACTTTGTTTTAGT CAATCTTTGATTTACTTAATTAGTTATACATCATTTGATGATGATTTTGT GTTATTGCGTTCTAGTTGCCGCTCTGAAATTAGGAAATTTATAATCATAT TTTTATTTGATTTTCTTAATTAAACTTTAGTTTTAAAAAAGAACTTTTGT ATTTTGAAGCTATATTTTACTTGAAATAGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056521TCONS_00056521Clytia hemisphaericatranscript
TCONS_00056520TCONS_00056520Clytia hemisphaericatranscript
TCONS_00056519TCONS_00056519Clytia hemisphaericatranscript
TCONS_00056518TCONS_00056518Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056519-proteinTCONS_00056519-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_276supercontigscaffold_276:709556..714486 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.8 22.1 5.26 3.26 18.98 14.69 23.14 25.58 25.77 23.32 17.73 18.96 16.08 13.08 15.49 13.46 16.07 18.92 14.92 18.29 19.46 21.64 27.49 31.46 19.51 19.96 21.32 18.74 17.38 17.19