XLOC_035053 (gene) - C. hemisphaerica

Overview
NameXLOC_035053
Unique NameXLOC_035053
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_257:1763..5823+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035053 ID=XLOC_035053|Name=XLOC_035053|organism=Clytia hemisphaerica|type=gene|length=4061bp|location=Sequence derived from alignment at scaffold_257:1763..5823+ (Clytia hemisphaerica)
AATACAAATTGACTTCACTAGAATGGAGAAGGGAGAAAGTATGTACCATT
GAATTTTCCGTTAATATTTGTAAGAATGCATCCAATGTGAAAGCTAAGTT
TTTCTGTTCATTtaagttcttttttttaaatttctcatttttcacTGATA
CTTTCAGCTCACACAAACTCGAAGAGGTAGACAGGAGAATGAGATAAATC
CGCTTTCAAATTTAAAAGCTCAAGATCTTTTTAATGAAGTGATGGACCGA
AATCTATTGGAAAAAGATTCAAGCCTTCTGAAGGACTACCTGGAACACCT
ATTAAAGACTGAAATGGCTGGCCTGGTGCGTCCTCCTGCTTTATGCAAAG
GTTGTGTGAATATATCAACAGAAGAGACAAATACATCAAAATATGAGGTT
TGACATTTGACTTTACCAGACACTAACTTTACTTGACATAACATGACATC
AATTGCTCCCATGAGCTAGCTATAAGACCTGGTAGCTTAATTTGGTAGAG
CAAGGACACAAGTCCTGACATGAGTTCGAATCTCATCCAGGACAAATTGA
CTGATTACAACTGACTAATATTAcaaaattttattctttttaatttgtta
tGAAGATTTTCTAACATTaactaaaattacaaaattttattCTGTTTAAT
TTGTTATGAAGATTTCTCTCTGTTTGAAAGTCATTATATGTATTTTACTG
TATTCTATTTAAGATTGATCACTTtctaaatggaaaaaaatggaACATGA
ATATCAATAACTTATACATTTACTCAATAAAGTTCCATTTTTTTCCATGT
TTATCCCACAATGATAATGATTCTTTTCAGATTAGTCCGAGTGAACCACT
CCACGACTTGAAGGGTCACATACGCAATCTATGGGATCTTTTACCAGATC
ATCTCCCTACAAATTTAAAGGAAGAGTTCGAAAAGGAGGTCGCTATTATT
CTCGGACCAAAGGACAAATATCGTGGTGCTGACTTCCGTTTCTCTGCTAT
TGTTGTTCACCGTCAAATGAAACCTAAATTTCCATCCGAAGTTTCTGATT
TAACTTATTCGCTGGTTGAGATTTCTAGGCTTGTTTACCAACCCGCACTG
AGACGATctccaaaatcaattttgaggCTCTATACAATGTCTTTCTTGCA
TAGTATGAGGTGTAAGCAAATCTTTGGTGAATATCCAAAATTATCTAAGT
TTTATGGTGAATACTATCACTCAATCATCGATCATTTTGCCTTTGTTCAA
AGAATTGTCGCCCCTTCATCTCTCCACACGGAAAGTGAAGAGCGACTATT
TGGAACGCTGCGATTGATAGGTCTGGCCACATCAGGAAGATCAGTAGAAT
CAGTTCGTGATGTTGGTATAGTAAGGTAGACTTTTACGTTATTTCAGACA
AGGCCAATCCTTCAGTGGAAATTTAGAGTTTATCaatgtttttacgtttt
taagtcttagtattttctttgttggaagtgattttttaaaagtttagcCT
AGAGAAATAAAAATCTTTCAGAAAGTGGTTTTGATGTTATTTGTATTTAT
TAAGAAATATTAAGTGACATATGCATATGAATGTAAGTTTCGATtgtaga
ttttgtaattttagagTTCAAGCAGAGAAAGATTTTCAACAGAGAAATGG
TAGAAGAAAGTCTGGTGtagatagcaaaattagcaaaGCTGCTAAAGGCC
TAGGTAAATTGAACTATAAGTTTAGAATTCAATTATTCAGTAAAGACTGA
AATACTTCAGGGAAGTTATCTCGCCTTCTTTTAAGATAATTAGAACATAG
CTATAATACAAGATATCTTTTCTGTTGAATGGCTAAGctgttattattgt
tatttagAACGTGGTTCAAATGCAAAGTTTTTGGTAAGTGAGTTCGAAAG
TCAAGACTGGCGTGCCTTCATACAACAAATCAGTGACTTTTTGAAACACG
ATGAAGGAGTTTGGTGGAAAAGAGACGGCAATTATGTCGAATTTTTGGAT
GGTGAAGATGCAGATGATTTTCGCGAAGAAGGTCCACGGTTGAAGGATTT
TACTGATACAATGTTTTATGAAGTAAGTTAACTTTATTTTTTGGCTCATT
TTTTCCCTGGCCAGTCAGAGGTGTGATTCTATTGGAAGTGATTATGAATC
CCTTTTCTCTTTTGTGTctaatttttgtgattttccctCTGAAAATGAAG
GTCATAATCAGTCATAAAAATGAAGGAGGTCTTTAAAGTGATATTGAGTT
GAGAAATCtgataaattgctttttaaaagagtacaaaattctgattcaaa
ttttatttttctttaatttagcTTTACGAGCCTTTGAAGCAAGACTGGGA
AGAGTGTAAAAGGAACGGCGTTGCTGCGAAACTATTGGATAGCAGCTACA
TCGACGAAGGTATATTAGTTTCTTTTTCATAATCATAACTAAAACCATAA
AGTGGGGAGGATCATAATTAAATGCTATGGGGTGATTCATTTTTctctaa
taaaaatttctaataaaATGGAAAAGATATTAAACCTGCATATCCACCAC
TCATTCACATCTATAACATTTCATTTTCTAAGACGATGATCCAGAAGTTG
AGGAGCCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATCT
AAAAACGATGCATGGTTTCCATGGTGCTCAACTTTGAGATCTAGTTCTTT
AGGGTAAATCTGTTTGTAGCAATTATGAAACTCATCTCTGTCATCTCTGT
CATTTTATATATAAACCTGCATATCCACCACTCATTCACACCTATAACAT
TTCATTTTCTAAGACGATGATCCAGAAGTTGAGGAGCCGAGAAAAGAAAG
TCCTCCACAAGAACGAGAgaaagaacaagaagaagaacGCGTGGAAATCA
TTGAGGTTGCTGCAAATGTTGAGAGCGAGAGACCAGAATGTCCAGGTAAA
TACACCTTTTACGGTTAGCTGCTTtctataaaaagtcaccaaaatttcga
gtaaacaaatcatctcattggctaaaagcaaaaacagGTGTATTGTATGA
TGTGTACAACTATAGTTAACTTAAGATTACTTCTGTTTAAAAGTTATTTA
ATGCTAAAAATATCGAGTTAACGATTATTTTTGCaatgttttctcaaaaa
tcattttattctttCAGTAAATACCATCAAACACGACCTGTCACACACCC
TCAAATCGAGTACTTCAAAAAGTCTTTACATCTTGTTCGGTATGTGTGAC
GACATCAAAAACTTTGATCATCACCGAATGAAGCACCGTACCGATAGAAA
TGAAAGATCTATGGAAATATGTCGGACAATCCAAAACAGATTAAGGCCTC
AAATTGTTACCATCCATGAAGAGCagaaaaaattggtgaaaaagtGGGAA
GGTAAATTCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055698TCONS_00055698Clytia hemisphaericatranscript
TCONS_00055699TCONS_00055699Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055699-proteinTCONS_00055699-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_257supercontigscaffold_257:1763..5823 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11	0.11	0	0.18	0.86	0.46	0.34	0.64	0.17	0.38	0.2	0.57	0.85	0.71	0.87	0.94	2.83	1.61	1.65	1.63	1.72	1.13	0.35	0.47	0.37	0.41	2.31	2.17	1.08	0.6