XLOC_034602 (gene) - C. hemisphaerica

Overview
NameXLOC_034602
Unique NameXLOC_034602
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_246:127084..131070-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034602 ID=XLOC_034602|Name=XLOC_034602|organism=Clytia hemisphaerica|type=gene|length=3987bp|location=Sequence derived from alignment at scaffold_246:127084..131070- (Clytia hemisphaerica)
TACATTCATGATCATTCATTACTTATTCCTTTGTTTTGATACAAGTTCTA
ATACCATATTGTTCTTTCAACTCTTCGTTCTCCTGTTTCAGAGTAAAGTA
GTAAAACATAAAACAAGAAACTGCATACAGCAGAAGCCATGGATGGACTC
TGTCAACTCACCAACAGAACACAAGGTAACGATTAATGATTCATTTTTTN
ACAGCAGAAGCCATGGATGGACTCTGTCAACTCACCAACAGAACACAAGG
TAACACTTTCACCAAAAATACAAGCAGTAAACATTAAAGTGTTTGAATAA
TGTGAACGCCTTGAACCGGATTTAAGAGGTGTCCGCTTTTTGATGAAGCC
TTCAACATTTGTTCCGCGTATTGAGTGTCTGCTATAGAGAGAATGCAGGA
ATCTTGATGTAACTGACCAATTGAATTTATGTTGCGATGAACTCTGGTAA
CCTTTTGAGTTTGTTAAAGATTATTTTTAGACTTTTTTTGTATCAACATC
TAGAATATGAAACTTATTTGGGAGAACGTGGTTGACAAGAATTTTTTAAT
CCTTCAAACTGATAAGATTATCATAGTCATAATAAAATGGGGGCCATTTT
ATTCTTGATGACGTCACAGATCTGATGAATGTATCAACCAAAACGTCGAC
AAGCGATAATGTAATAAAAATATTTTCAGAATGATAAAATAGATTTTTCT
TACATAGCCTGACAGATCATTTATTGTAATTGATTTTTAAACCTTTTTCT
CATGAAATTGCTGACAAATACTTTACAAAACCTCAGATAAAGTTATACAA
AGTCGTTTCGAGCTTTTAAAGAAAGAGTTGTAGTTTTGGACGTAACAACA
ATGGCTCAAAAACAGCATCGAGGTACTAAATCTGTTTTGTTTGTTTAGTA
TCTTTCTTATAATGAAAATAGTTCCATATCCATGAGTAAAGGTTTTAGTT
CAGCCAATTTATAATCAAGGTCAAAGAAAATCTCTTCAGACAGCTTGAGA
GGAATTCCTTGGCATATTTTACGTAATTTTATTCATCATTTGATCCGTTT
TTTATTGAGGGATTTAGAATAAGTGAATGATGGGGAACACATTTTCCAGT
TGCTTTGTTTCCCATTCAGCCTCTTTTTCTTTCATATTTTATTTACCAGT
TTATCAGTTTGAAACTTCTTCTTCAAAATAAGGAAAAAGAAAGAAAATTT
AGGAAAAGGAAATCTTTCATACAAAATTCCTTAATTATTTAAAGGAGAGT
GTGTTAGGATTTCCAAGGGATATACTTTATTATAGTCTCACCTCTCACTA
TATGAGATTCACTTGATGAAAGTTTTGAATGGAAATGGATGAAAATCTTA
TAACACTTTCTTTTTCGTCTTGATGTGTTTAAATCTTATTCGTTCTGTAA
ATCTTCTTCTTTGAACATGTGAATAATTAGTAGTTTCAAGTATTGTTTGT
TGTCAAGAGATTACCGGGTGATTAATCAGTAATTGGCAATTTCCTTCTTC
ATCTAATTACAAGGCAGTAGAAAGATAATTAGAAGCATCCATGTATGTTT
AAAATTCTTCGTAGCTTTACTACTCGTTTGAAGTGTTTACATGTTTGATC
AGATATTTACGAGAAAAATCAATAAGATAGAAAAGTCGAGAAGAATTTGA
TGGGAAATGATAGATCTAAATCTAACCATATTTAGTTTAGCTAATAGAAG
AGGATTTTTATGTTGAAATTAATTTTCGATGCGTTTGTTCCTATTTCGTA
GTTTTTTAAAAGTTGCCACCGTAGGTTACATGGACATGGCAAGGCTTCAT
GATGTATACTGTCATAAATTTGCCTCCAAGTTCGTCACTAAATGACGTTA
ATGATGATATAAAGGACAGCTCTTTACTTTGTGACTGCTTTTTAAAATAA
TTCTTGATAAAAAGCTGGTATTTTGCTATGAATGACTTATCAGAATCAAA
GGCAGTTTGAAATCCAGGAGTCTAATGTCATGTTTTTGGTTGTTCTGTTG
TTGTTTTTGTCATTGTATACCTGAAATAAATTTCTCATGAGAGTCATGTT
TCTCAATGCTTTCTTTATATATCATGATTGTGAAAGATCCTTAAGTTGAA
AATTTATCAAAGTTTATTTCCAATTCATAGAGAGTATAGATGCAGTATTT
AGTTTTGTTGAGATGGTTATATTTTGTTTTGAGTGTAGATTAAATGTGCA
ACTCTGAAGCTCGATTTGATTACCTCTGCCTTGAGCCTGTATATTGTTCT
TCATAGTTCGCTATATTCTCTTATTTCAGTGGAAATCCCAGCACCAGACT
ACGAAGGAGCACCTTCTTTGCCACCTGTTGATTACAACCAAAACGCACAA
CAACCTGTCACAAAGTCCTACATCCGCAACAATATGTCTGATGCCATGAA
AGAAATCTCCAAAGATATTAACTTCAGAGCAAAACAGTAAGTGTCGTTTA
CTTATGAAATTTAAAGGAAGAAAAATATGGACAAATTTAGTAAACTCTAG
ACCCTAAATGTGTGGTTTTTGTATACTTAGAGAAACTTACAGATGAAAAG
TCTGGATGACTGCAATTTGGATTTTAGACGCTTATACCTTTGATCTTAGG
GTGGAGAATCGTTCCAATAAAATAGTGACAATAGCATATTTCTTACCATG
AAATCTTCAAATAAACTCTTCCTTGTTTTGTTATTTTTCAGAGATCGTCA
GCAGCGACCGGAATTCTTAGCCAAACAACATCAACTGAAATCGAGTGCTG
CCAAAAAACAACAACAAAAAGATCACGAAGAAAACAACGAACTCTTCGCA
AAACTAAAATCACGATCGCAAGCTATCGATAATGTATGTCTTTGATAAAT
TTTCTCATCTATTTCGTAGTAAGCCTCATAAGCTATCGTATACACGTGTT
AACTTATAAATCCCTTAAGAGACTAAAGGCACCTCATTGAAAGTGTTAAT
AATCTATTTCGCATTTGAGTACCTCAACAACATTTCTCTATTCTCATTTT
CAGGACGAGAGACAAAAAGAAGAAGAAGCTCAACGTCCAGAGTTTATGAA
AGTCAAATTAAAAAGTGGTCCAAATACTCCCATAGCGTCTTCATAGATAC
AAACTCATCACTTGAATTACCCAGGATTCTCTGTTTGGCGTTGGACTGAA
GATGAAACTGGCCTCAGATTGGCTGAATTTTCCTCCCCTTGTTTTCTGTG
AACGGAAATATGTCGGACAAGATACATGTTGGAACTTTGAAATTTCACAC
ATTTCAAACATTTTGTTTTAAAGATGGTTTTATTTGCTCTCGCAATGGAC
AGAATCTTGGACAGAATCTTCTGTTCGAATCTTTTGTTTTTTAGCTTTAT
GTTGTGTTAAGCTAGGATTAATCACAGCTTTGAGCGCCAACGAAGCTGAA
ACTCTGTCGGCTAAATAATGCGAGGAATCGATGAAAAACCAGCGGGGCAC
AGCTGCAGGGCACTGACCCATAACTGGGTGGCTCTGTCTAATTTTGATTC
TCAGAAGCGATCGACCATTTCAAGATAGTACTTGGTACTGGATTTTGGTA
AATACTAAAGTAAATACCAGTTACTAAAAAGGGGGCGGTGGTAGTTAAAA
CAATTCCTTCTGAAAGTACCCTATGGATTAGTACCCTGCGGCTGTATCCT
TCCCTGTGAAAAAACATGTTTTTTTTATTCTGGTTTTTTTTCGAAGATTT
ACTGTTCCATCATTGCTGAATAGTTTTAGTCAAGCACAGTCTAAATATTC
ATATGTCTATGGTCAAGTGTGATTCTAACGAGTTTTAAAGCACTGTTAGT
CTTCGCAAACATACTTCCTATGTAAACCTGAGATGACAGAAGATATATTT
CCCTACGAGCGTTCTCCATTTTTGTAGATTCTTCAAAATTGTATCGATAA
GATTTTTGTATATATATTTTTTCTAATAAAGAATTAGTTTTAGTACAAAG
TAAATCATTATGTAGTTTGAAAATATCTTACTTTGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054914TCONS_00054914Clytia hemisphaericatranscript
TCONS_00054913TCONS_00054913Clytia hemisphaericatranscript
TCONS_00054912TCONS_00054912Clytia hemisphaericatranscript
TCONS_00054911TCONS_00054911Clytia hemisphaericatranscript
TCONS_00054910TCONS_00054910Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054910-proteinTCONS_00054910-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_246supercontigscaffold_246:127084..131070 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.41	16.37	30.34	33.01	4.18	3.61	15.96	17.65	16.49	14.52	12	19.62	24.62	24.97	28.19	33.27	22.45	24.3	25.55	46.55	52.69	56.11	27.45	32.07	45.67	41.15	96.97	83.26	35.32	35.74