XLOC_034299 (gene) - C. hemisphaerica

Overview
NameXLOC_034299
Unique NameXLOC_034299
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:1602410..1611879-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034299 ID=XLOC_034299|Name=XLOC_034299|organism=Clytia hemisphaerica|type=gene|length=9470bp|location=Sequence derived from alignment at scaffold_242:1602410..1611879- (Clytia hemisphaerica)
CTCCGGTTACCAAATGTTTCGAATCTTCATCAATTAAAAATTATATTTGA CAAAGCTGTGCAATCAAATGGGTGATCATATTCGAATGGTTAATGATTCT CACACGTGAGGGTTGGGCACTATATAAAGGGGTGGTCATGACACTTCAAG ACACACTCATTTTCGAAGTTGAAGAAGAAGAGAAGTAAAGGTGAGTACAA ATCATTTTTTTTTTTCATCTTCTTAAAGATTTTGTCTCTCAAATTTTCTA TGACTCGATTTTCGCTAAATTACCTACAAAGAGCACCACAGTGGCGGATC TGAGTTAAAAAATAATGACGGAGAGCCATCATTTTTCATAAGGAGTATGG CTAATAAAAGAAACACTCTCCTCCGTCATAAAATTTGAACCTTTCACAGA TCAGCAACTGGTACCTACAAAATTCAAACCATGCATTTAGGTGATGATGT ATAAATTGTCTTTTAGATGCGTGTGCTTACATGGATAATATCGTTGGCTC TTGTGGCATACATTCAGTCGTATACCGTAAGTTGAAATAGAAAACTGTTA ATAAGGACTATTTTGCTTTGGTGTGCTATCTTTTTTGTCATCCAATAACT TTACTTTCATATTTGGCTTTATGGCTTTATTTAAATTATCGTGATCGAAT CCACGATCTTAACTGACTGACCTTAACGCAAAGACGTTTTAATATATTTT AATGTCGCTTTGAATATCTCAGATTATTGGTATGTCATGATTAGTGATTT TGGACATAATTTTGAACACTTCAGCAAAAAATATTTTTCAAATCAAAAAA AATTTCTGATTCTTTTTTGTTTATAGATTCCAGAAAATGATTTGCTCGAT TTACCAAAAGGAAAAGATTTACTTGACCAAGAATACATCTTTGATGACTG TAAGTTAAATATTAAAGTAGTTTAGAAATTACCAACATGTTCTTGAAAGG ACCAATTTGTTGTGGCAAACAATCTAAGTAAATCCTAAAGACAGAGATTC TGTGGGAACCTTTGTGGAATTTCATTTGATGTACATAAATTAAAGTCAGA ACTGATATTTTTTTTCAAATAATTATTACAGTATGGGAAAAAGTGAAATC TGCAGCCAGCAGATTGGTCGATTCAGTAAAAGCATCAACACAAAAAATCA TCGAACAATATAAACCTCAAATCCTTGCTGCTTTGGAAAATGTCAAAAAA GTTGTCATTAAAGGAGTCAAAGACTTGATCCTCGAAGTTGTCAATGGAAT TGTCAAAATCATTATCGATGGTGTATCTTCAACATCAGATGGCAAAGATC ATCCAGAATTTGATCTTGTTTCATTTCCGATCTTTGAAGTAATTGATAGC TCTTCCATTCCAACAATCAACTTTGTTACTGATGGTACGTAATTTTGACG GTTCAAACTTGTTTCCTGCTCGCCTCTGAAATAAAAAAATAGATAAGTTG CAAATACTTTTTCAAAATCATGTAATATTAATTCTATCTTCAAATTTCAG CATGGAAGAAAGTCACCGATGCTTTCGAAAAAGCTGGAGACAAGATTAGC AACCAAACCAGAGCTTTGATCGAGAAATACAAACCAAAAGTAACAGATGC TTTGACCAGAGTCAAGAAAGTGATCATTGACGAGGGAAAGAGAATCGTTA TTGAAATCATTGGTGATATTGTCAAGATTGTTGTTGAAGATCTTCAAGAG GATGAGATTGTTAAAGAACTTGCTGCTCTTTCCGAAGATTCTGAATTGAT GGATGCTGAATTCTTCTTCTCTGAATGTAAAGATGATATTTTATTCACAA AAACACAAATCCTATCCGGGGTCTAAGATTACTCAAATAATTCCGGTTTT TAAAGAGCCAAAACAACTTTCCCAATTAGAAAACGTTATAGTAGTCTTGA AAACCTTTCAAAGAAATCTCTATCAATTTTCTCTTTAGTATGGGAAAAGG TGAAAACTGCAGCCAACAGATTGTTCGATTCAGTAAAAGCAACAACACAA AAAATCATCGAACTATACAAACCTCAAATCCTTGCTGCTTTGGAAAATGT CCAAAAAGTTGTCATCAAAGGAGCAAAAGATTTGATCATCGAAGTTGTCA ATGGAATTGTCAAAATCATTACTGATGGTGTATCTTCAACATCAGATGGC AAAGATCACCCAGAGTTTGCTGTTGTCTCATTTTCAATCTATGAAGAAAT TGATAGCTCTTCCATTCCAAGAATCAATTTTGTTACCGATGGTAAGTTAT TTTGACGATTCGAACTTGTTTTCCTGTTAGTCTCTGTAATAAAGAAAATA ATCAAAATAGATCAATTGCAAATACCTTTTTCAAAATCATAATATTAATT TTATCTTCAAATTTCAGCATGGAAGAAAGTCACCGATGCTTTCGAAAAAG CTGGAGACAAGATTAGCAACCAAACCAGAGCTTTGATCGAGAAATACAAA CCAAAAGTAACAGATGCTTTGACCAGAGTCAAGAAAGTGATAATTGACGA GGGAAAGAGAATCGTTATTGAAATCATCGGAGATATTGTCAAGATTGTTG TTGAAGATCTTCAAGAGGATGAGATTGTTAAAGAGCTTGCTGCTCTTTCC GAAGATTCTGAATTGATGGATGCTGAATTCTTCTTCTCTGAATGTAAGAT AATATTTTATTCACAAAAACACAAATCCTATCCGGGGTCTAAGATTTCTC AAATAATTCCGGTTTTTAAAGAGCCAAAAAAAACTTTCCCAATGAGAAAA CGTTATAGTAGTCTTTAAAACCTTTCAAAGAAATCTCTATCAATTTTCTC TTTAGTATGGGAAAAGGTGAAAGCTGCAGCCAACAGCTTGGTCGATTCAG TAAAAGCTACAACACAAAAAATCATCGAACAATACAAACCTCAAATCCTT GCTGCTTTGGAAAATGTCCAAAAAGTTGTCATCAAAGGAGTCAAAGATTT GATCATCGAAGTTGTCAATGGAATTGTCAAAATCATTACTGATGGTGTAT CTTCAACATCAGATGGCAAAGATCACCCAGAGTTTGCTGTTGTTTCATTT TCAATCTTTGAAGTAATTGATGGCTCTTCCATTCCAAGAATCAACTTTGT TACCGATGGTAAGTTATTTTGACGATTCAAACTTGTTTTCCTGTTTGTCT CTGTAATAAAGAAAATAATCAAAATAGATCAATTGCAAATACCTTTTTCA AAATCATATAATATTAATTCCATGTTCAAATTTCAGCATGGAAGAAAGTC ACCGATGCTTTCGAAAAAGCTGGAGACAAGATTAGCAACCAAACCAGAGC TTTGGTCGAGAAATACAAACCAAAAGTAACAGATGCTTTGACCAGAGTCA AGAAAGTGATCATTGACGAGGGAAAAAGAATCGTTATTGAAATCATTGGT GATATTGTCAAGATTGTTGTTGAAGATCTTCAAGAGGATGAGATTGTTAG AGAGCTTGCTGCTCTTCCAGAAGATTCTGAATTGATGGATGCTGAATTCT TCTTCTCTGAATGTAAGATAATATTTTATTCACAAAAACACAAATCCTAT CCGGGGTCTAAGATTACTCAAATAATTCCGGTTTTTAAAGAGCCAAAAAA ACTTTCTCAATTAGAAAACGTTATAGTAGTCTTGAAAACCTTTCAAATAA ATCTCTATCAATTTTCTCTTTAGTATGGGAAAAGGTGAAAACTGCAGCCA ACAGCTTGGTCGATTCAGTAAAAGCAACAACACAAAAAATCATCGAACAA TACAAACCTCAAATACTTGCTGCTTTGGAAAATGTCCAGAAAGTTATCAT CAAAGGAGCAAAAGATTTGATCATCGAAGTTGTCAATGGAATTGTCAAAA TCATTACTGATGGTGTATCTTCAACATCAGATGGCAAAGATCACCCAGAG TTTGCTGTTGTCTCATTTTCAATCTATGAAGAAATTGATAGCTCTTCCAT TCCAAGAATCAATTTTGTTACCGATGGTAAGTTATTTTGACGATTCAAAC TTGTTTTCCTGTTAGTCTCTGTAATAAAGAAAATAATCAAAATAGATAAA TTGCAAATACCTTTTTCAAAATCATAATACTAATTTCATCTTCAAATTTC AGCATGGAAGAAAGTCACTGATGCTTTCGAAAAAGCTGGAGACAAGATTA GCAACCAAACCAGAGCTTTGATCGAGAAATATAAACCAAAAGTAACAGAT GCTTTGACCAGAGTCAAGAAAGTGATCATTGACGAGGGAAAGAGAATCGT TATTGAAATCATTGGTGATATTGTCAAGATTGTTGTTGAAGATCTTCAAG AGGATGAGATTGTTAGAGAGCTTGCTGCTCTTTCAGAAGATTCTGAATTG ATGGATGCTGAATTCTTCTTCTCTGAATGTAAGATAATATTTTATTCACA AAAACACAAATCCTGCTCTCTTGATCTAAAGTTATTAGAATTACTCCGAT TTTAAAGAGCCAAAAAAACATTCCCAATGAGAAAAAATTATAGTAGTCTT GAAAACCTTTCAAAGAAATCTCTATCAATTTTCTCTTTAGTATGGGAAAA GGTGAAATCTGCAGCTAACAGATTGATCGACTCAGTAAAAGCAACAACAC AAAAAATCATCGAACAGTACAAACCTCAAATCCTTGCTGCTTTGGAAAAT GTCCAAAAAGTTGTCATCAAAGGAGCAAAAGATTTGATCATCGAAGTTGT CAATGGAATTGTCAAAATCATTACTGATGGTGTATCTTCAACATCAGATG GCAAAGATCACCCAGAGTTTGCTGTTGTCTCATTTTCAATCTATGAAGAA ATTGATAGCTCTTCCATTCCAAGAATCAATTTTGTTACCGATGGTAAGTT ATTTTGACGATTCGAACTTGTTTTCCTGTTAGTCTCTGTAATAAAGAAAA TAATCAAAATAGATCAATTGCAAATACCTTTTTCAAAATCATAATATTAA TTTCATCTTCAAATTTCAGCATGGAAGAAAGTCACCGATGCTTTCGAAAA AGCTGGAGACAAGATTAGCAACCAAACCAGAGCTTTGATCGAGAAATACA AACCAAAAGTAACAGATGCTTTGACCAGAGTCAAGAAAGTGATCATTGAC GAGGGAAAGAGAATCGTTATTGAAATCATCGGAGATATTGTCAAGATTGT TGTTGAAGATCTTCAAGAGGATGAGATTGTTAAAGAACTTGCTGCTCTTT CAGAAGATTCTGAATTGATGGATGCTGAATTCTTTTTCTCTGAATGTAAG ATAATATTTTATTCACAAAAACACAAATCCTATCCGGGGTCTAATATTTC TCAAATAATTCCGGTTTTTAAAGAGCCAAAAAAACTTTCCCAATGAGAAA ACGTTATAGTAGTCTTTAAAACCTTTCAAAGAAATCTCTATCAATTTTCT CTTTAGTATGGGAAAAGGTGAAAGCTGCAGCCAACAGCTTGGTCGATTCA GTAAAAGCTACAACACAAAAAATCATCGAACAATACAAACCTCAAATCCT TGCTGCTTTGGAAAATGTCCAAAAAGTTGTCATCAAAGGAGTCAAAGATT TGATCATCGAAGTTGTCAATGGAATTGTCAAAATCATTACTGATGGTGTA TCTTCAACATCAGATGGCAAAGACCATCCAGAGTTTGCTATTGTCTCATT TTCAATCTTTGAAGAGATTGATGGCTCTTCCATTCCAAGAATCAACTTTG TTACTGATGGTAAGTTATTTTGACGATTCAAACTTGTTTTCCTGTTTGTC TGTGTAATAAAGAAAATAATCAAAATAGATCAATTGCAAATACCTTTTTC AAAATCATATAATATTAATTCCATCTTCAAATTTCAGCATGGAAAAAAGT CACTGATGCTTTCGAAAAAGCTGGAGACAAGATTAGCAACCAAACCAGAG CTTTGATCGAGAAATATAAACCAAAAGTAACAGATGCTTTGACCAGAGTC AAGAAAGTGATCATTGACGAGGGAAAGAGAATCGTTATTGAAATCATTGG TGATATTGTCAAGATTGTTGTTGAAGATCTTCAAGAGGATGAGATTGTTA GAGAGCTTGCTGCTCTTTCAGAAGATTCTGAATTGATGGATGCTGAATTC TTCTTCTCTGAATGTAAGANGATATTGTCAAGATTGTTGTTGAAGATCTT CAAGAGGATGAGATTGTTAAAGAACTTGCTGCTCTTTCCGAAGATTCTGA ATTGATGGATGCTGAATTCTTCTTCTCTGAATGTAAGATAATATTTTATT CACAAAAACACAAATTCTATCCGGGTTCTGTTCTCTTAAATAATTCCGGT TTTTAAAGAGCCAAAAAAACTTTCCCAATGAGAAAACGTTATAGTAGCCT TGAAAACCTTTCAAAGAAATCTCTATCAATTTTCTCTTTAGTATGGGAAA AGGTGAAAACTGCAGCCAACAGATTGGTCGATTCAGTAAAAGCAACAAAA CAAAAAATCATCGAACAATACAAACCTCAAATCCTTGCTGCTTTGAAAAA TGTCCAGAAAGTTATCATCAAAGGAGCAAAAGATTTGATCATCGAAGTTG TCAATGGAATTGTCAAAATCATTACTGATGGTGTATCTTCAACATCAGAT GGCAAAGATCACCCAGAGTTTGCTGTTGTTTCATTTTCAATCTTTGAAGT AATTGATGGCTCTTCCATTCCAAGAATCAACTTTGTTACCGATGGTAAGT TATTTTGACGATTCAAACTTGTTTTCCTGTTTGTCTCTGTAATAAAGAAA ATAATCAAAATAGATCAATTGCAAATACCTTTTTCAAAATCATATAATAT TAATTCCATGTTCAAATTTCAGCATGGAAGAAAGTCACCGATGCTTTCGA AAAAGCTGGAGACAAGATTAGCAACCAAACCAGAGCTTTGGTCGAGAAAT ACAAACCAAAAGTAACAGATGCTTTGACCAGAGTCAAGAAAGTGATCATT GACGAGGGAAAAAGAATCGTTATTGAAATCATTGGTGATATTGTCAAGAT TGTTGTTGAAGATCTTCAAGAGGATGAGATTGTTAGAGAGCTTGCTGCTC TTCCAGAAGATTCTGAATTGATGGATGCTGAATTCTTCTTCTCTGAATGT AAGATAATATTTTATTCACAAAAACACAAATCCTATCCGGGGTCTAAGAT TACTCAAATAATTCCGGTTTTTAAAGAGCCAAAAAAACTTTCTCAATTAG AAAACGTTATAGTAGTCTTGAAAACCTTTCAAAGAAATCTCTATCAATTT TCTCTTTAGTATGGGAAAAGGTGAAAACTGCAGCCAACAGCTTGGTCGAT TCAGTAAAAGCAACAACACAAAAAATCATCGAACAATACAAACCTCAAAT ACTTGCTGCTTTGGAAAATGTCCAGAAAGTTATCATCAAAGGAGCAAAAG ATTTGATCATCGAAGTTGTCAATGGAATTGTCAAAATCATTACTGATGGT GTATCTTCAACATCAGATGGCAAAGATCACCCAGAGTTTGCTGTTGTCTC ATTTTCAATCTATGAAGAAATTGATAGCTCTTCCATTCCAAGAATCAATT TTGTTACCGATGGTAAGTTATTTTGACGATTCAAACTTGTTTTCCTGTTA GTCTCTGTAATAAAGAAAATAATCAAAATAGATCAATTGCAAATACCTTT TTCAAAATCATAATATTAATTTCATCTTCAAATTTCAGCATGGAAAAAAG TCACAGATGCTTTCGAAAAAGCTGGAGACAAGATTAGCAACCAAACCAGA GCTTTGATCGAGAAATACAAACCAAAAGTAACAGATGCTTTGACCAGAGT CAAGAAAGTGATCATTGACGAGGGAAAGAGAATCGTTATTGAAATCATAG GTGATATTGTCAAAATTGTTGTTGGAGATCTTTCAGAGGACAAAATTGTG TTGGCCAAAAGAAACATTTTAACCGATTGTGAGTACTACATAATCCTAAC ATTTAAATAATATCTAAAGTAATATTCCAAACTAGATACCATCTTCAAAT TGAGTTGATTCTTTGACAACATCTTTGAGTATAAATCTAATAATTTCAGA AAATTACAGTCGAATCTCCATAACTCGAACCTCCATCCTTTGAATGTCTC CTTAACTCGAACCAGTTTACCGTTCCTTTCAGATAAGAAACCCCAGTAAA CAATTCACCATAACTCGAACTTTCCATAACTCGAACTAATTTGCTTGCCC TGTGCGTGTTCGAGTTATGAAGAATCAAAAGACCTTTTTATAAATTACGT CACAAACAACACTTGCCTCGTTTTAAAATTATTGCCATGGTGATTAACTC CCAGCGGATTTTATTAAAACTAATTTCTATTCATAAAAGGATCACCACGG TAATTATTTGAATACGAGGCAAGTGATGTTCCTGAGGTAATTTATGAAAA AGTCTATTGTATCTAGAAAAATATGTTCTTAAGCTAAAATAATGTGTCCT TTAATTTTGTAGTATGGCAAAAAGTGAAATCCGCAGCTCAACACTTATCA TCTCAAATCAGAACATACGCCGAAAAGATGCTTCAGAAATACCGACCACA GATCATGACCACCTTAAAGGTTGTTGGTGAAGTCGTCATCGATCAAGTCC GCAAAATCATCATTCGCATTATCAAAGATGGTATTGTAGGTATTTTCGTG AACGGTGAGGCAGTGACATCTGATGGCAGTGCTTTTATGTTGCCAGAGAA AAGGATTTACGCTGTTTTGGATCAATCACCACCTCAAATCAACATCTTCA AGGATGGTAAGTGTTTATAACTTTCACAAAAAATCGATGGGGATCGATGG TCGATAAAGACATAAATGTTGTCATCAATTTCATAACTGTTCAATTTAAT CTCCCAGATTTAATTAGAAGCAGTTCAACGAGTACCAACTATATAGTTAC CATTAAATGCCAACAAGTTTTGAATCCATTTCACTTTCTTCCAGCTTGGT CAAAGGTCAAGGCTTTCGTTGAAGACAAGGTGAACAAGATCAGCTCAAGC GTGAAAGCCATCATCGAGAAATATCGTCCACAGATTGAAGAAGGTTTGGA GAAAGCCAAGAAGATCGTCATCAAACACGGAAAATTGATCATTATCGAAA TCATTGGTGTCGTCATCTCCATCATCGTTCTTTAAACGTCCTGATAACGT CCATAACGTTAGATGAATGTTGAAACAACGTCCTGCTAACGTCCATCTCT TCTTATCAATACCGATTCTATTGGAGAAGAAGATGGAAAGAAATTTTGAT TTATTTTTAAATATATTTTTGTGTTTTTTAGTATTCTTGTCGATTCTATT TGAAGATTCGTCACTTTTTTAGGAACAAAAAAGAGAAATAGTCTTGTTAA ATAAATGGTGTTCGGTAGTAATCTCCCAACTCCCAATATTTTTCCAACAA CTTCAACTTTTACCTCAAGTTAATGTAAATTTTCCCTTTTTTCGAGTGTC GCGTATAGAATTTGTCGTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054426TCONS_00054426Clytia hemisphaericatranscript
TCONS_00054425TCONS_00054425Clytia hemisphaericatranscript
TCONS_00054424TCONS_00054424Clytia hemisphaericatranscript
TCONS_00054423TCONS_00054423Clytia hemisphaericatranscript
TCONS_00054422TCONS_00054422Clytia hemisphaericatranscript
TCONS_00054421TCONS_00054421Clytia hemisphaericatranscript
TCONS_00054420TCONS_00054420Clytia hemisphaericatranscript
TCONS_00054419TCONS_00054419Clytia hemisphaericatranscript
TCONS_00054418TCONS_00054418Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054420-proteinTCONS_00054420-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1602410..1611879 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.06 0.85 1.09 0.59 0.13 0 0.42 0.22 0.28 0.22 0.5 0.89 1.25 1.36 0.56 1.44 22.16 18.75 7.26 24.03 90.58 77.4 513.77 793.18 683.6 623.33 1.18 0.23 1.16 2.96