XLOC_034249 (gene) - C. hemisphaerica

Overview
NameXLOC_034249
Unique NameXLOC_034249
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:60792..66831-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034249 ID=XLOC_034249|Name=XLOC_034249|organism=Clytia hemisphaerica|type=gene|length=6040bp|location=Sequence derived from alignment at scaffold_242:60792..66831- (Clytia hemisphaerica)
CGTGAGGTATATAATTAATCTAGTCTATCTTAGTTATATCTAAGGGAAAC ACTCAAACATAAAATCCCAAACAACACCCCGGGAAAGGTGTATTAGAATG ATTTTACACGCGAGTGCATTCCTTTATATACGAAAAAACAGCCAATGAGG TAGCCGACTGCTGATTATGGGTGGTTATGGGTGATTATGGATGATTATGG CTGTATCCGCGGATTAGAAACACCGATGTAAAAGGTACAGCGAGATCAGG TAACTTGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATAAATGACCT GGCTGGTCATTAAAATACAAAGTTAAATCAAAACAAAAATGGTAGAGTAG AGCTGCGAGGGGAGCTGTAGGGTTCTCAAGGGGATTAAGGCAGGGTCAAA ATGCTTGCAACGTTACAAATCATTCTCAGAAGCTCGTTTTGGGCTCAAAC GAAGCGTATAACTAATTAGAATAAGATTCAGTCTAGGCAGATGTTTTTTC ATTTTGAAATTTTGCGTAATTCGCAAAAATCCTCAACTTTGCGCTATTTT GATGACGTCATAAAAATTGAAATTATAATAACTTTTGATAGAATCATCAA AATAATTTCAAACTTTCACCAAAGGTGCATTTCATTGCAAATTTTCAAAA AATTTCAAAAAATTTTCAAAATCTTGATGACGTCAGCATTTTTTAAGGAT TTTAGTTTTTTGCCTGAAAAATGATGACGTCATCAATTTTCATTAAATTT TTTTTTTAATTTTGAAAACATTAATAATATGCATCTTTGGTCAAAATTTG AAATTATTTTGATAATTGTATCAAAAGTTATTGGGATTTCAATTTTTATG ACGTCATCAAAATTTTGAAAACATTAATAATATGCATCTTTGGTCAAAAT TTGAAATTATTTTGATAATTGTATCAAAAGTTATTGGGATTTCAATTTTT ATGACGTCATCAAAATAGCGCAAAATTGAGGATTTTTGCGAATTACGCAA AATTTCAAAATGAAAAAACATCTGCCTAGACTGAATCTCATTCTACTTAG TCATACGCTTCGTTTGAGCCCAAAATGAGCTTCTGAAAATGATTTGTAAC GTTGCAAGCATTTTGACCCTGCCTTAATCCCCTTGAGTTAGTTGTATTTT AATGACCAGCCAGGTCATTCAGTCATTCATTTGAGGGCTATGCATGTTAG CTTCCACTGATGCAAGTTACCCGATCTCACTGTATAGACCTGACAGTCTA AGCCTAGGCAAAACCTGGAAATAAGGCTGTTGCATTTTATTTATGAAGTA AAACATCATCTCCCTCTCTATACCTAAACTTTTTCCTTATAATGGGATAT TCAATTTTGACCTACCATGTCCCACATACTGACAAACTCTAGCTACAGCC TTGGTTAAGCTAATCAGATTGATTGAAACTTTTCCTCAAATGGTTTGAAT TTGTCATCTTGAATACACTGTTGTAATGTAATGTAAAATTTAATAAAATT TATTTGGTCAAGAAGGTCTAAAATTTAGGCATTGCTACAAGCATTGATGT GGACCTACTATATAAAATAATTTAAAAAATAATAGGATAATAAAATATAA ATAACTATTTCGACTATTAACAAATAAATACCGGGTGCGCCACAAAAAAG TTTCTCTCTTTAAAACTGGTTTTTTCGAAATCTAAGAATTAAGAAATAAC CATTCCTGTTCCATCAGAAAGAAGAAAGATAAACTTAAATTTTGATGGGT CATTTAATAAATTTGATTCATTAGATCAAAAATTATACTCAATCGAATAA AAAAGTCACTTTCAGAAAGTGCCCGAAACGTGGGNAAAAGTCACTTTCAG AAAGTGCCCGAAACGTTAAAAATCGACCTATCAAATTTTTATTTTAAAAT TGGTAATCGCAAGAGGCTTTAAATGCTTAAGACCATTTTTCAGTAATTAA ACACATAAATTTTGAAACTGATGGAACGAAAGGGTTTAAAATGTTCATCA AAATCATTTCAGTTTACTTTTAAGGAAATTTTCCTCAGATTTTTGGTTCT AGACTGGATAAAGTATATGTAAGGCTGGATGTACCTCGAAACCCATATTT GATGTATTTTTATGAATTTTACCAGATTTTTGGCTTTTTTCGACGAATTG TCTGCCTTTTATTGAAATTCAATCTTCCTTTATATAACAAACGGTCATTT AGACAGCTAAGTATCATTTGACTGAAATGACTGAAACGAAAATACTGATG CATTATGTTATGTTATTCACCAGGGGGGGGGTCTTGCAATTACTCCTTGA CACTATGTGGAGTAACTGCAATTTTGGACATTTTCTACAGACACCACCAC CCTTGCAGTTATTCCATAGTGTACTAACTGATTTTACCCTNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNTTAGTCCACTGGTGGAGTAACTGTTTTCCCAAATTTTGGTTTA TATACCACCACGGTAGTAATTGTCATAGTGTTTATATAATAACTGCATGA CCCCCCCTGTATTCACAGGAAAAAATCCGTAAATCACATGCGTGTGAAAA TGTAATTCACAATCCATCTTTTCTCACTTGTTAAATAGAATAGAAGTGAG TTACTTTAGGGTATTAAACCTCTCTCTCTAAGAAAGACAAACAATCCTAT TTGTGATTTTAGATCTAGTCAGACACTCCATTTAAGTTGAGAAAAGATGG CTTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATGGCTTGTG AATTGCATTTTCACACGCATGTGATTTTTTGCAGGATCACATGCTCGGAA ATCAGTTTTACCAAGCATGTGATTTCCATACTTTTTCCTGTGATTATTTT TCTGTTTAATTTGATAGGTCGATTTTTAACGTTTTTGAGCACTTTCAGAT AGTAACTTTTTTATTCAATAGAGCATAACTCTCGATCTAATGAACCGAAT TTCATAAACGACCCATCAAAATTTAAGTTTATCTTTCTTCTTTCCAATGG AATAGGAATGGTTCTTTTAAAAATTTTAGATTTCGGGAAAATAAGTTTTA AAGAGAGAAACTTTTTTGTGGCGCACCCGGTATATTCTTAAAGTTAAATG GGCTAAAATAAATGACTTAAAAAACAGAGACTTCAGAGATTATCAGAGAT TATTGCAAAAGTAATTGAATTTAGAGAATAAGGCTTGCAAAAACAAAAAG AAATTGCTGGAAATTGTGTGTTGTGTTATAGTTTAGCTGAGCGAAAAAAA TGGATAATACTGTGAGAAATTAATAGAACATAAATATTAAAATACATATA TTGAAATGCTTTTGCTAGGAAATAGGTTAATTAAAATTAAATAGAAAATA TAGGTAGATGGGATTCTGGCTTAAATTCTAGTTACTTGGGTATTATAGTT AGATGAGTTGAGTGAAGTAAGAGCTTGGAGCTTAGAGCGAAAAAGAGGTC CTAGGTGTGAAGTTAATCAAGAGGGGGATATCCTAAGTATGATGATAATC AATAATAAATAAAATCTAGGTCACGTGCATCTCCAACGGTGCCAAATTTT ATGCGATCTAAAATATCCGATTTTTTAAGAGCATCTTTAAATGAGTCATA TGAATCACATGCTTTAAGTTTTGGTGTCAGATTGTTCAAAATTGACACAA CTCGAACACGAAATGATCTCTTATAATCAACATATTTTGATGGTGGTACG TGAAGACGCCAGTCATTTCGATTCTTCTTTTTTTAGTCACATCTGTCAAT CAAGTTAAGAAGCAGTGGTGAATACTGTGCTTTATATATAAAGTTTAGTA GTGTCGACTGCGCACGCATCCAAACAATTTTCCATAGTTTTGATTTTAGC GATCGCTCTCTCTCGTAAAAAAAAGGTAGGTAAAATTCCAGTTCTTGTAA GGAAACCTAGCAGTAGGTAAAGAACTCCTTTTAATCATAACTTCTTTTCC TCTTGATGCAATTTTTGTGAAATTTTCAGGAGAGATCCATAAAATTATCA TTGATATCATTTTCAAATATCTAAATCATTCTCTTTAAAGAAAAGGAAAC AAAATGAAATGTTTACATTCCTCTAACCTTCCACAGTACTAAAGTGCATA TTTTTAACCTACCGTTTTTACAGTGGAACACGGTGGAGATAGCGAGACTC CTAAATGGTGTATTAATCTATTGATCTCTCTTATAACCAATGTCCAAAAA TGTCATAAATAACATAAATAACATGCCAATAACTGGGAAGCCTTGGGCGT GGATAGATTTCATAAATTGCTGTTAATGAAATCAATTTTTTGTCTTTTTT GAAAAACTATAGAAGAACTGATTTGGTAGAATTTTTATTTAACCATTGAT TAATGCTGACTAATATTCTGTTTAGAAATGAAATGGCTACAAATAAAGTA GATCTGAAGAGAGATTCATTGAAATTTCTCTATGAGACCCCTTCAAAGAC AGAAGTTAAGACTAATGCCCAATTATTGGAAGAATATCTAAAAGAAAATG CAATAAACAGTAACCACTCTGATATTGAAAAATTGAAAGAAAGATTGCGG TTCAAACCCTTGCTGTTAGAGAAATCACTTGTTGGTAATAAGGATAAAAA GAAAAGGATAGAAAAAAGGAAAAACACCAAACTTGGCAGAGTGGCAATTA AAAAATTGAATCTCTACAAAATATCAAAAGATGAACAAAAGTATGATAGT TTTTTACCTCTACACAATCTTTGGAAAAACTATGTACGAAATTTATTTTT GCATAAAAACGGAAAAGTGATGATAAGAGCTGAAGAAAGAGTCCTGAAAA TAGACTATCATGGTGCTAAAATTGAGGTGAAGAAATGTAAATGTGAGTCA TTTGTTGGAATCTCTGGAATCATTGTCAAAGAGACAAAAAATATGTTTGA AATTATAACACAACAGAACGAACTTAAAGCCTTACCAAAGAGGGAGACGT TGTTTGAATTTCTTATTCATGGACATAAAATCAGCATATATGGAAATGCT ATTGTTGGACGACCTGGCGAGAGGATGGTCAAACGATTTAAGAATACTTA TGAATCAGATATGATTTTAGATAATTTGTAATAATTTTTTATTTTTAACT TATTTATTATTTGAAGATATTTTGAATTGGAATTCCTTTCTTGTTTTATT TTTGCTCTTGATCAATGAAAGCTTTTGTTGGAATTGTCACCATTTTATTC TTTAAAGGTTTAACCCTATTCATACTAGGCTTTTAGGGGCAGTTCATACT AGGGGGCTGTTCCTGTACCACTCATTAACTTTTGATTTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054312TCONS_00054312Clytia hemisphaericatranscript
TCONS_00054311TCONS_00054311Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054312-proteinTCONS_00054312-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:60792..66831 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
POP4ribonuclease P protein subunit p29 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
59.33 50.91 22.03 15.02 35.01 22.13 13.23 15.18 6.5 7.07 5.98 4.26 4.16 5.19 5.4 4.74 6.37 4.08 3.41 3.91 12.14 11.53 37.17 35.26 6.49 8.79 5.15 5.08 14.42 16.43