XLOC_034146 (gene) - C. hemisphaerica

Overview
NameXLOC_034146
Unique NameXLOC_034146
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_24:157806..162002-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034146 ID=XLOC_034146|Name=XLOC_034146|organism=Clytia hemisphaerica|type=gene|length=4197bp|location=Sequence derived from alignment at scaffold_24:157806..162002- (Clytia hemisphaerica)
GTTTGCAGTATAGATTTTCACATGTCTAAAAAAGTTCAAGCCTAGAAAGA
TTATTTGTATGTTTGGTGTGATTTCCTGTTCTTGACTCGCTAAAACTTTT
ACACCGTTCTCAGTCTTTTAGCATTATCTAATTTTTTTAGTGAAATCGGT
GAATGTGAAAAAATGGTATGTAGCAAGAAATTGGAGAAATATGGCTAACC
AAATGAAGAAAAGTTCCATTGTTTTATGGGTTTTAGTGATATCCCTCGAT
TTCGGTAAGACTATGTTATCGTTCGCACTTTCAATGTGAAGCCGTCACCC
GGCAATCTGAAGCGTCAGACATCTATGAATACTAAAAGGGCTGGTTTTCG
AGAATTTTAGCACACCATCGAATTTTTGAAACTTTTTCAAAACTTTTTGG
AAAATTGATCTCTCGGGAACAAATTAGTTATCACGGGACATTTATTTCTC
AAAAAACATGCAACATGTTTTTTTGTAAAATTACGAAAATCTTTGAAAGA
AGATTCAGAAAATTACAAATATCACTAATTACTTAATAAACATTTCTAAA
ACATTTCTCAAATATTTCTCAATTTTCTTCTACATACATATCACGTTTTT
GGAGATTCTTTGGCATACAACCACGTGATGTCCTAAGATTTTAGCACTCG
CCCCCTCCCCTGATATGCAATACACGCATTTTTATGAGAATAGTGTACTT
TGGATGAGGGTCAAGTATTCTTAAGAAAGTGCCAAAATTGAGGGTGAAAT
ATTCTTAACGTATTCTTACTTTTTTAGACTTGACTTTTTTACAAACATGA
GAAATAATCAATTTGAGAGTTTTGGACTTTTGAGTGAACATTTGGGTTAA
AATTAGATATTTTCCTCAAAGCTTCAATTCATCTCTAACAAAAACAAAGG
AAACAGTTTTTTCTGTTAACCAAATACAAAATGACTGTAGTCTTATCAAA
TTCTGTGAAATTCACCCTAGGGGGGTGTTCTTACGGTATTCTTATGATTT
GGCCAATTTTCACCCTGATATTCTTATAGAAGATATTCTTTAAAAAAAAA
GCGTGTAAATGTATGCATTTTGTTGCTTTATAATTGTTTTTGCTAACTTC
TTTCATAGCATCAAACCTTGAAGTAACTGGTTTAAATTTGGTCAACAAAA
CGTTGATAGGAAACGTCACGCTGCAACAATCAAATTTCCAAAATGGTCAA
CTTAACATTTCTTCAACAAATTCAACACGTGTTGCCAGACCTCTGATTAC
AAACCAATCAAAAACGTCCGTCAAGGAAAACAGCCAATCAAAAGCGAGCG
TCGTTGATAAGAAGCAATCAAAAGTGACCATCAAGGAAGACAAAAAAGAC
ATTGGCCAAAACATACAAAAAGACTTATCAACAAAATCAGAGATTTATAA
AATGCATTCAAATGGATTAATGCTTCTACACCCTCAACGTTCATCGATAG
CAAAAAGTTCCAAAAAATCAAAACTTGCTTCAAGTTCGTCAGATGATAGT
GCTGTTAATTATCATATATGGAAGAAACCGGATCACGACAAAACGACAAA
TCAGTCGTCGGCTATCGTTGAAAACGAGAAATTTTTAGAGACTAAATTAG
GAAATCTTCCACAAATACAAGAAGGGAAACGAGAAACGACGACTTTTAGC
GAAAATTGTCTTGATACGGATCCAATCGGAGGCAAACCTTGTAATGTAGA
CGAGGAAAGTAACGAAAAACAGGATTATTTACGCCGAAAACGAGAATCGA
TTTTACAACGAAGAACGAGTACCGAGGATCGAGAATCGACTTTAAACCGA
GAAACGAGAAACGAAGATGATCCTTTATTCGACGATGATCAACCTGAAGA
AATTCTTCGCCGAGAAAAAGAAAAACGAAGACTAATAAAATTAAAATCAA
GATACGGGAGCGCTCTATCTAGAGGTATTCCCGATATCCCAGCAATAAAA
CCGATTCCCGATATACAATCCCGATTCGAGAAAATCGAGCCTTTAGAAAC
GATTCCACGGTTCGGACTTTTTGGGCCAGAGGCGTACGACAACTGGCCAA
GATTTGGTGTACCGGATTTAAGTTTGATGCATTATCCACGTTTTCCAGCA
CCTAAAATGGACGAATTTGAACAAATACCAGGGATCCCACATATCCGGCC
TTTAAGTCGCGGAGATGAAGTGACCGGTGACCGGAGAGGTTACCCCGCGA
AAAACGATGATTTTTATGACCAAGAACTCGATGAGGACATTGAGCATAAT
TCACCAATAACTTCACCAACAGCTATTCCCTCACTAACGAATATACCAGA
CATACCTGACATTCAAGATATACCGACCATTAGTCCAGCCCGCGCGGCCG
CTCGCAAATCGTCAAACGGACAACCAGCGGTTGATACAATTCATACGAAA
GATGGGGATGAGACGAGGGTGTCTACTTAAGAATGAGTGAGAAAGGAAAG
TAGTTTCCGTTGGTTGAGAGCGTTTCTGAGCTTTTGTTTACGGTATCTCA
GCTTACATTATCGAACGTGTTATAGATGTTTGATGGACACTGTTTTGACG
TATTGTGTAATAAAAATTACAACTTACTATATTCCTTGGTCCTCATTTAG
GTCAAGAGTCGTTACAGTGAGTCTGGAAGAATGCTTTTGTATAAATCAAG
TGTATCATCTTTCTGGAGTGTAGAATACATAAAATGAGACGAAATTTATT
CATTTTTCAAGAGGTACATCACCTGACCCCGAGAATGTAGTAAACCCCGA
GAATGTAGGTTTCTCATTTTTTAGCATTGTAGCCCTAACGATAGTTCAAC
TTCTTAAAAATTTGTTTCAGAGCATACTGCTACATCTTACTGATTATTTC
TGGACAGAAAATTTTAACTTGAATTAATTTTTTCCAACGAAAATCTGAAT
GGAAGTTGATTGGATATTACCCGAACTGAGACATTTTTTAAATAAATCCT
CTCTAAATCGAAATCCATTGGAATTAAGTTATGACGATAGGGTATTTTCT
TAGTCCTAATGAACTAAGGAAATGGGGAAAATAGTCCATTTCAATATTTA
CTGTTCTGAGTTAGATATTTTGACGAAAATGTTTGACCTATATTTTGGGG
TTAGTTGACCTACAATTTGGGGGCCTTTATAACCCGACATAAAAAGTCTG
TCAAATTATATAAAACTTGTTTGTTGTACTTTTATAACATGAAAGTACTA
CCTGAGAGATGATTAATGTTGAAATTTTGAGCTTTTACGACGTGTCCCAG
ACCCGTTGGGGCCCCAGCCCAATCAAAAAATTTGCCTAAGTTTGGAGCAA
TAGAATTTCTATTCCAATTTGGACTTAAGTAGAAATTTTTGGACCAGATG
TGGGAAAAAGTTCCACCGGGGCTGTGAGGCAGTTGTCTCTTCCTTTCGTG
CTTCCTTTTACTTTTCCTCATTTGTAGTACGATGAAATTAATATATTTGG
TTAATTTTTTGTCAGCGTATATTTATAAAGTATGAATTTCACTTAGAGAA
CAATAATTTCCGATGAATACCGAAATTCCATTCTCAACAACCGAATCTTT
TCACCTACATTCTGGGGGTTAAAAAGTGAAAAAATCCAATTTTCAGAATA
ACAAAATAACAATATTGTTTTCGCATAAAACATTTCTAAAATTTACTGTT
AGAATTAATCCAATTGAAAAAATATCAACATTTTACTATTACTAGATTTA
AAGCCATAAAACCAAATCTACATTCTGGGGGCTATATAGGAGTCAACTTC
AAGGACCAAAAAAATTGGTCTATCTATCAAAAGTAATGAAACTAACCCCT
GGGAAAGGATTTTGGGAGTTCGAAATTTCGTTGAAAATATTCAATATCGT
TTAAAATGCAAATCTACATCTTTCAGGTCTGATTCAAATTTCACCTACAT
TCTCGGGGTCAGGTGCTGTATTTGCTTTCCAAAGGTAGTAAAGTATGTGT
TTTTGAAGAGGCTGTCTTTCACCATAAAAACCCATGTAAAATCTAAGGAT
TTTAAGTGTGAAATATGTATAAGACTCCTAGGAAGTTGTTTAATCTGCTT
TTTTCTCATTGTTTAATTTTAGCTCTAAACAGTTTCTTAATTTTATTGTG
TATTCAGTAATCCTGCTTTACCACACTGCTTTTTTATACATATGCTTATT
TTTAGAATTGCATTTTTTTTGTCATACAATAAAATACACACAGAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054106TCONS_00054106Clytia hemisphaericatranscript
TCONS_00054105TCONS_00054105Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054105-proteinTCONS_00054105-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:157806..162002 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.76	1.09	0.69	1.03	6.49	6.67	7.93	9.77	1.94	1.9	7.72	4.46	4.9	4.3	5.09	9.86	4.34	4.64	0.58	0.6	3.23	3.49	2.89	3.15	2.81	3.6	1.47	1	1.6	1.03