XLOC_034121 (gene) - C. hemisphaerica

Overview
NameXLOC_034121
Unique NameXLOC_034121
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_239:43489..51847-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034121 ID=XLOC_034121|Name=XLOC_034121|organism=Clytia hemisphaerica|type=gene|length=8359bp|location=Sequence derived from alignment at scaffold_239:43489..51847- (Clytia hemisphaerica)
ACATTCCATATCATAATTATGAAAAGGCTTTTTGTAAGACGTAAAGTGAT CTAGGTACAATTACGTGATATTATGGGTTCATTTGCAATATCATATATTT TTATTTTGTTCTTCATTCGTTTCCATTCAGGTAAAGTCACATTTAATTTA CCTTTTCCCAAACAAGAAAAGCCTTAAGATTTGCACCGCATTTAGAATGA CGGATTGAACTTAGCTCTTTCTTTGTTTTCTATCTAGCGTTTGCGTGAAA ACGTGGGTCACGCGTTTTGGATTGAAAATAAGTGGCTTCATTTCCCATGC ACGGGGCTTTGAAATCAAAGGTACTGAAAAGACCATCCCGAGATCGAGGT ATGTTGAGGTCATCAAGATAAAAAATAGATTCAATTATATGTTTCTTTTG TAGAACCTGTTGATTGTAAGAACATTGTCGTATCAAAGTCAAACGGCAGC GACACAAAGGGGTGCGGCTCAACAATACAATTTGCATGTAAAACATTACG GTATGCTGTTGAAATGGCTGAAGATAATGACGTCATCCTCTTGGATGGAA GTAACTCCACCATGAAATATGACTTCACCAATACAGTTATTGATAAAAAC TTATCCTTAGCTGCGTTAGACACTGCAATATTACCTCTTCTTACAGCATC AATTAAGGAAGGAGAGCGGAACTTCATTTTGACTCATACTGGGTATTTCA ATGTTAGTTATATGAACTTTTCAAGAAATTCTTACTCTTTCACTCCAACA GACCCTTATTTTTCAGTTGACTTGACCTCTTATGGATCTAACAAACTTTT TATCACGGATTCGATCATACAGAAAGGAGCACCGATGTACAGAGTAAATA GCTGGTATGTTGAAGGGTCTATTTATATTTTGAGGTGTATATTTCCTGAT GACTTCAAATGTTTTGTTCCTGATCATAGGTCGAAAAATCAAACGAGCAC CAAGGTTCAGGCTATCGTCAAGGATTCTTTATTTTCGTATCTTGGCGAGT CAGCATTCGATTGGTGTTTACATGCGTCAGTATTTTCTCTTATAAATTGT TCGATTGGGCTGAATAATTTTATCCATCACGGATTTGATACTGTAAACAT CCAAGAAACCACCGGCAGTATTTCGATTAAAGACACCCATGACTTAACCA TTATAGATAGTGGCTTGATTATGAACTTGGAAAACATAAATCACGCTATA ATAGTTAACAATACGTTTATTATTCGCTATAATGTTTTTTGGATACCCTT GACTTTCCAAAATGTTACCTCGTGTTTGATCAAAGACTCTATAATTGACA TTCCGTTTCCAAGAAAGGGGTGCCCGGTTGATAGTCTCCCTTCCTTCCAA ATACACTCAAGCGAAGTCACATTTGAAAGGTTGACATTTATAATGAATGA AAAATTGAAATACTTATTGGATATTAAAACCTTCAAATTTCCAGAAAAAA GTTGGATCGATTTGTCATGCGAAAATAAACTTATTTTTGAAATAGGTCTT CCAGCTGATCCTTCCGATATTCATATCTCACAGTTTGATTTTGGATGCCC GGTAAATTATATTCCAAAGTATGTATGTTTTCCTCGTCAAAATCAGCAAT ATGTACTTTACTGTGATGCGATGATAAATAATCAATACACTCTCAACAGA TCTGAGCTCAGTTATACTATATTAAATGGGTATTATATTCAGTCTCCCCC TATTTACCAATGCCCCCTTCAAGCAAGATGCGGGGAGGGAAGTATATTCA ACTTGGAGCCTTATTGGGGATATATCAACACAGAAAATGGATCTAAAGTT GATAACAGTCCATTGGAATTTGTAACTTGTCCAGAACATTTTTGCGGAAA CATCGAGTCATCGAATGCTATTGAAACATCTTGGCAATATTGCCAGGGAA AACGTATTGGTCGACTTTGTGGTGATTGTCCCGAAAATTACATTGTTCCC GTAATCGGTTCGAAACAATGTCTCCTGATGACTGACTGTGATGATGGGAA AATGTTTTGGATTTTGTGGCTGTTGCTTTGTCTCTTTATACTGACAGTGT ATGGATTTCAACGAACAATAGCTAAAGTTATATGCTACTGTTTTGAAAAA TATTTCCGTAAAAAAAGAGTGCAACGACCGATACCGCGAGAGATTCAAAT TGAAAATGACGAAATTATTGAAGAAGAGAATAATATACCAAATAATTGTC ACGGTCCGCAAGAAAACGAGGAAGATAGAGTTTGCCAAACACCTCCACCA CAGCCTTTGGTACCTTTACCTCATGTTGACCATCAAAGGAATCAACAACA ACAACTTGCAGACGATCATGTAGATGCGCATCAGCTTTTGGAAGAACATC AACAAAAGAACTCTTTAAGTGGATGGTTTGTCATTTTTATCTCTTTCTAC CAAACCATTTATATTATCCGACCCTCAAGAAACACAACCAGTTCATCGCA AATCTTTTCGACAATCAATGATGTCTTTTTTACCCTTTTCACTGGAACTT TGGATATCGTCTCACCGAATATCACCATGTGTCCTTTACAGACACAAAAT GCCGACCTCGTTGAATTCATCAAAATAAGCCCTTGGATTGCATGTATAAG TTTCACCATTTTCTTGATCATTATTTTGACATATGTGGTGAAATTCAAGA GAAGACAGCTTCACGGAAATGGCTATCAGAATCTTGAAGCTGCTGGTGAA AATGGATGGCAAGAAAGAACACTTTCTCATCTTCAAAAAGGTGTCACTCA AATGATATTTATTGTTTACATTCCCATTAGTATGTTTTTGCTGCGTTTAC TGAAATGTGTTGAAATAAATGGTGAGCATTATCAGTTCATTCAAGCCTCC AACCAATGTTATTCCACGACTCAAATCGTTGCTTGGATCTTTCTCATTTT CTGGTCAATCTTCTTTTGTCCAGCATTATACCTGGCAACGAGATTGCTGC AGATGAAAAAAATTGCGGTGAACGAGTTTGTGATTGTGTTGATTTTCCCG CTTCAAATTGTTTGGTATTTAATTCGAATAGGCATGCGTAGAAATGACAA CGAACAGGTAGTGAATGATGACAAAGAAAACATCTACAAAGTGATGAGCA ACCCTTTCAAAAGAAACGATGAGAACGTCCCCATTCAGTGGCTACCAATA ATTTTATTCAGAGCTTTTATTTTGGCCATCATTTCAACCTTTGTGTTGAA TACCGAGAAACGAGTTTTGGCAAATACCGCTTTTAGTGTTGTCCTTATGA TCAAAGATTCCGTTGTTTGGCCATACCGGAGTGTTCGTTTGAATACTCTG AATATTATGTGTTGGTGTGGGTTGTTTTTGGAGATTCTGAGCTCGTTTTT TTTGGTCATTTGCTAATCTTTCATTGGTGAAAGAATTTTCTGGTCTTTTC GTGGGTTTTGAGTTTGTTTTATTGCTAGCGCCAATCTTAGTTTTGGTTTT TGTGAACCTCTATGGATTATTATTTGCAAAGTACCTTAAAAGATTTTTTA ATAAGCAGGACTAATTTGCTTAAATTATTCTAACTTTTTTATTGATTTTT CTTATGGATTATCCAATGAACTTACATTCTTTCTACTTTCAAGCTCGTTT ATGGAAATATTTGATCACCCAATGAAACTATTTTAGTTTGACATTTGAAC ATCCTTGTCTCAATGCTCCACTGGAACTCCTCCCCCCAGTATATCAAAAA TCCAATTGGGATGAAGCTATTGTTTTTTAACTCGATTTTCTCCATTCAAA TTTCAATAAAAATAAAAACATATATGGCACTTTCCTTTTCCGTGGAAATT TCGAGGTGTTTTCCACCGGAGATAATTTTTTCAAGTGGGGTGGAGTCGCC CTGTGACAAAAGGGTGTACACAAATATACATTAACTTTTACGTTCACTTT ATTATATAACATAGTTTGTATATTATAAAACGTAATATGTTGCAAGGCGG ATAGAGTCTGTGTTTACGGACGATATCAACTTGGAGTTTTTCTTGATTTT ACTTTTGTCCTGACCAAAATCCAAAATTTCCGCTTTTCTGCCAAGTTGAT AAAGTCTAAGACAAGAGCTACCCCCGAAAAAATCCCCGTCTTCACGTTTG TTCCTCTTAGATGAAACTCGTCTTAGACTATAGCATAGTCTAGGGTGTAT TTGAATCTGATTAAGTTTGTGTATTGCACAACAATCATTTTATCTTTGAG ATTTTAGAAAAATTTGATGATTTTTCAAGAACTAAATATGTAATGATCCT CAATAGAATTTCTTAATCAATTCAATTTCTTTCTTTTTCGTATTAATATT AATTGACATACAAAAAAGAATATATTTATAGGAATCCATTTTTTATATCA AATATCAAAAACAATGCAAATTTAATATTCTTGACCACAAGTTTGAAGAC CGAAGGATTTTTGGAAAGAATTTTTATTAGAACATTTTTATCAGTATCGA ATCCTTTCTGCAAGTCTGTAAAAAATTGCTGGTTTTGATACTTCCGGCTA AGCTGATTTTTAAGCCATATTATAAATAAATCTACACTGTCAATAATTTT GAAAATATTTTAGATTTACGAAACAAATCTTGATTATTTTTCTTTTATTT GGTATTGGTGTTTCTAAAATTAGATTTGTAAAAATTTCTTGTGGATTAAA AATAAAATTTATTTTCGTCATTATCATTATGAAATTTTAATGATGAAATT TTCTCCTCCTTTTTTTGAATGCGGATTTTAAAGAAGCGGCCAGAATGATA AAGGGATAAATCGTTTTCTTCATTTCAAATTTTGGGACTCCCTTTTGGAG GTTTCATTTCCCTTGTGAAAAAATATAAAATATTTTGAATAGAGAAATTA TTATATCGGAGAATTTTCACTATTTTTGTATAATGGAGACCATCGATATT GAAGAAATTAACAAAAAACACCATATCTCCTTAGGTATGTAAGAATATTT GTATCATCGCGAGGAAGAACTGTGTGGAAAGTGATTAGAAAATTAGTCGA TATAACCAACTAGATGTTAACACTGATACTACTCTAAGGTCCCAAATAAA CATTAATTAATTTTCGAAAAGTTTTCAGACCCCTGTTCTTATTAGGACCC TCCCTTGTTTATTTATTTTTGAAAATATTTTCAGTTATCACTGAATTGTT TTAAATAGCCTGTTTTTGGCTTGTAATTGCCTTCTTTTGAGGGTTTTTGG AGGTATAATTTTGGATTCCCCTTTTATTGAAGAATTTATCGCTTGCTACA GTAGCAATACTTTGGCCAGGTTTTATGAGCGAGTGTACCATCCCATGGTC TCAAGCAGATTTCAATTGCATATAATAAAGTTCAAGTAAATGTGTCAATT GCTAGGTTTGAATTATTTTTTTTTTTCAGATAATTCCATCCTCGAGAAGT TCGCACCGATTCCAGAGAAGGTCCCGGAATGGAAAAAAGAAATCATTAAA CGAAAAAATGAAAAGCTTTTGGTAAGATGGATTTATATTTAAACAGCTTT TAGGCGTTAATCTTTCCAATAGAAAGTTAAGGTATATCTCATAACCATAG GAAATCACCCGGGGGTACTTAGGCAAATGGAGGGTACAGTATGTGCTGCC CTTAAGAGTACCTTTTTTGGATTTGCAAAGTCCCGCTAAGGGTCGGAAAA ATCAGAAAATCAAATTTCAGTCCCACTAAGGGTAGGAGAAATAGGAAAAT TTCAACTTTTTACCTCCAGAAAGATAGAAATTTGGTCAAATTGTTCAATT TTGTCCCGGTAAAATTTTCAAATTTTCCTTTTTTTCTCGTTTTTAGTCCC GGTAAGGGTCCGAGGGTCGAAAGTTGAGTGGCACCCCCCGTCAGCTCGCA ACCCTAGTACCCCCCCGGGACCCCCTTCTCACAGCAGACCCACTGGGACC CCTTCCCACTGGAAAAATTGTCTTAATTTTCCTCCCCCATGGAAAATTAT CCTCCAATTTTTGTCCCCAGTGAAAATAACCAAATAAACCTGTCCTCACT GCAAAATATTTATTCTCTTTTCCCATCCTCACTGAACTTTCTGACTTAAA AACAAAAGAGTTGAAATCCCCAGCCCATCAAGTTTCAGTTCGTTATTTTT ACCCCCACTGGTTGTAAAAATCCTACCGGGTCTGTGAGAAAGAGGTGTAG GAAAACACACTCAGCTCTCATTACACAATGGAAAAAAACTTGAAAGAGCA TTGCAATCTCGATAATATTAAGGATCTCTTTTGAGCTTCTAGCTAGATAA ACAATAACAATGACATCCCCATCCATTGAAAATAGTTAACTTACTATCTC CTGGCATATAACTCCTTCCATTTCCGATTGACTAAAAAACTCTAGTCATC AATGTTTATTGGGCTTTCTTTAAAATGCAAGCTGTGATCTTAAAAGCATG TTAATCTTTTTTGTGCTGACTGTCAGCAATAAGTAGCAAGCAGGTAATGA TGAAGAGCTTGGACTCTGTCAAATGTGTTTTGGTCAATACAAATCTTGAA AATCACTCGTATACCTACTTCCACTCCAAACTCTCTATAGAACATTCCCT TCTCACAGACCCGGTGCGATTTTATCAGCCAGTTGGGGTAAAAGTAACGG ACCAATACTCGATGGGGATTGATATTCCCATGTTTTTATGGCCGGGGATT TGAATTCCATCGTTTTCTAGCCAGAAGAATTCAGTGGAGATGGTGAAAAT AGTACTTAGTATTTTACTTTGAGGATTTGTTTATCTGATTATTTTCAACG AGGACAAAAATTAGAGTATAATTTTCCACTGGGGACGATATTTTGGCCAA TTTTCCCAGTAGGACGGGTCCCCAGTGGGTCTGTGAGAAGGGGGTGTTAT AGACAAAGAATTAATTCTAAACCTCTATTCCTTCATAAACTACCTTTACT TCTCATAGGTATCTAGTAAATGGGGTTCAGAATAAACTGGGAGGGGATTT TAAAACCGTTGGGTCGTTTATTAGGCGCTAGAGGTAAATGAGCGACGTTG GGGCGTATTTGTTGATAACTTTAACCCTTTGCGTTCAGGGGTTACAAGCA GTGCTCTTGCATGTAAATGGTTTTCTCACATAGAAAGTTAGTCGATTTGC ATCCAAATATACATTCATCCCCTTTTAATTGATTTAAGGATGCTTAAGGG AAGTAATCAATTTATTCCGCAATAAAAATACCTTTATTGTTACCATATCA AATTCAAGTTAGCATGTAGTTACACTGCGTTTTTTATGAGGGAAGGTCAA AAAACATTATGAATATAGATCTATAAAGCCCGAAGGGCTAGATGACATGC TTTGTTTGAAAGGTGTGCCTTGGTTTGCGGTAGGAAGTCTTTCCGAGGTC ACGTGATATTACAATAGAATTTCAGCGCTTGACCAATCAGAAGCTTCGCG ACTGTTCGAAAACAATAGCAACAATACTTTTTGCGATTTCAATTTTTTTT GCTTGGAAAAGTTTGACACCCCATCTAGCACTTCGGGCTTTACAGAAATC TATGATTATGAAAGGAACTATAAAAACAATCTTGTTGATACTAACTTTTG TGCCATAAATGGTAGTGTGACCAGTGGCCGATTTTTGGTTGGTGGTGTCG AAGGACACCAGAACGCTTAAAAGAACCCATCGTCGCTTTTTCGGCGCATC TTACCCTTTTTCACCACACAAACAGTAATATTCCAGCTGGCACACAACGT TGTTACAACGTTCATCTAACGTTATATGGACGTTGTGAACATTAGATGAA CGTTGAAACGACGTTGTGTGCCAGCTGGGATNNNNNNNNNNNNNNNNNTG GACGTTGTGAACATTAGATGAACGTTGAAACGATGTTGTGTGCCAGCTGG GATTTTAGTCAAGGGGATCAAATCCTCACATTCTAATACCCGTTATACTA TACTACTTTATACTATCACACCGGAAAAATTAGCACATTTGAGGCAGAGG TTCAAAGGTTAATCTAAACGCACTAAAGGAATCTTAAACGTTAAAAGACA TTGTCATTCTGTCATTTTCAGCAAGACGCAATCGACGAAGCAATAGCACA GAAAGATCCATACGCTGGAGTTCCACAATGGAAGAAAGAACTTCTGATCA AGCGAGATAATGAAAAAGCGCAGCATAAAGAACGACTTTCCGTTGAACAG AAAGTAAAGGAGGAGGTTACCAAGAAATTTGAAACCAAACCAGAATGGAA AAAAGATCTGATCTTAAAACGTCGTATTAGTCAAGAATCCCCACGACAAA TGCAAACTTGAAATTCGTTATAATTATTTTGTGTTTTTAGTCTTTGTGTG ATGTAAAATATGAGTTTACTTTGATTATTTCATTTAGGGACAATATACTT ATGTTTTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054065TCONS_00054065Clytia hemisphaericatranscript
TCONS_00054064TCONS_00054064Clytia hemisphaericatranscript
TCONS_00054063TCONS_00054063Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054065-proteinTCONS_00054065-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_239supercontigscaffold_239:43489..51847 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0 0 0.41 0.5 0.76 2.73 3.16 6.24 4.49 4.4 4.3 30.67 24.25 5.67 2.3 3.32 2.67 51.64 67.63 3.7 4.56 3.15 3.24 5.13 6.3 0.98 0.7 14.72 4.19