XLOC_034056 (gene) - C. hemisphaerica

Overview
NameXLOC_034056
Unique NameXLOC_034056
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_237:500486..504223+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034056 ID=XLOC_034056|Name=XLOC_034056|organism=Clytia hemisphaerica|type=gene|length=3738bp|location=Sequence derived from alignment at scaffold_237:500486..504223+ (Clytia hemisphaerica)
TTTCTCTGGAGATGACCCATTCTTTCGATACAAGAGTACTTTTAGCAGCT
TAAAATTAACAATATCATAATGTTCAAGAGGAAACCAAAAGCAACTATCT
GAGAAGGTATGTTTTCGTATATTtgacagttttgtttcatttaaaaCGAG
CTCTTTTTTTGGCACCAAGTCAAAAAGCTTACACTTTttcaaatctgtat
gagaaaggcaactgcatacacttgatttaaaatttcctaCACAAATTCTA
AAGCGAGCATAattctttgacaaaaaattatcactttttgaaaggataga
tatggtatgttgttgatgcaaggggtgctaattttggttgattgtttcgt
ttttcccatgttcaacgtacgaaccgtggaaacgtattctttcttactca
aataagaaaatgatcttttataatccattaaacaatcttccaaaagcaat
gTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCGTGGAAACGtattctttcttactcaaataagaaaa
tgatcttttataatccattaaacaatcttccaaaagcaatgTGTTACATT
CTAAGAGCAACTCGACGAACGTCGTGTTTATGAGGCCCTGGACTTAACGA
CATGCCATTTTTCAATGATATTGGCTTTTAACATTCCAATGAAAAGTTTG
CATTATTCaagctataatttttgaaaaggggtGCTTTTTATTCTTGTAAA
AGCCTTCAATTGTAAAAATGATGCTCTCAAATGATAAACCTTATTGTTTG
TGGTAGGAaagattgaatttaaaaagctgtggcttttttttattcaagaa
aatattatgtttcttatgtttatcaaaaatcactctgCTTTCTGGCCTTT
GTTCTttatttcaCTTAAGATTATTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATATCATAATGTT
CAAGAGGAAACCAAAAGCAACTATCTGAGAAGGTATGTTTTCGTATATTt
gacagttttgtttcatttaaaaCAAGCTCCTTTTTGGCACCAAGTCAAAA
ACCTTACACTTTttcaaatctgtatgagaaaggcaactgcatacacttga
tttaaaatttcttaCACAAATTCTAAAGCGAGCATCattctttgacaaaa
aattatcaCTTTTTGAAAGGATAGATATGGTATGTTGTTTATGCAagggg
tgctaattttggttgattgtttcatatttcccatgttcaacGTACGAACC
GTGGANGCtaattttggttgattgtttcatatttcccatgttcaacgtac
gaaccgtggaaacatattctttcttactcaaataagaagATGATCTTTTA
TAAtccattaaacaatcttccaaaagcaatgTGTTACATTCTAAGAGCAA
CCCAACGAAAGTCGTGTTTATGAGGCCCTGGACTTAACGACATGCCATAA
TTCAATGATATTGGCTTTTAACATTCGGATGAAAAGTTTGCATTATTCaa
gctataatttttgaaaagggatgcttcttattcttgtaaaaacctccatt
tgtaaaaatgatgcTCTCAAATGATAAACCTTATTGTTTGTGGTAGGATA
AATGGAATTTAAAAAGCTgtggtttttttttattcaattaaatATTATGT
TTCTTATGTTCATCAAAAATCACTCTGCTTTCTGGCctttgttctttatt
tcatttaagaTTATTGATATCGATGGAAAGGAACAACGtcaaacagagtt
gaatatgcaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGTTCAAGAGGAAACCAAAA
GCAACTATCTGAGAAGGTATGTTTTCGTATATTtgacagttttgtttcat
ttaaaaCAAGCTCTTTTTTTTGCACCAAGTCAAAAACCTAacactttttc
aaatttgtatgagaaaggcaactgcatacacttgatttaaaatttcctaC
ACAAATTCTAAAGCGAGCATCattctttgacaaaaaattatcaCTTTTTG
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGGAAACGtattctttcttactcaaataagaaaatga
tcttttataatccattaaacaatcttccaaaagcaatgTGTTACATTCTA
AGAGCAACTCAACGAAAGTTGTGTTTATGAGGCCCTGGACTTAACGACAA
GCCATAATTCAATGATATTGGCTTTTAACATTCGAATGAAAAGTTTGCAT
TATTCaagctataatttttgaaaagggatgCTTCTTATTCTNNNNNNNNN
NNNNNNNCAAATGATAAACCTTATTGTTTGTGGTAGGATAAATGGAATTT
AAAAAGCTGTGgctttttttattcaagaaaatattatgtttcttatgtgt
atcaaaaatcactctgctttctggtctttgttctttatttcaCTTAAGAT
TGTTGATATCGATGGAAAGGAACAACGtcaaacagagttgaatatgcaaa
gtttatAGACGACGAATAACGATAGTTTTTCTGGAGATGACCCATTCTTT
CGATACTAGATTACTTTTAGCAGCTCAAAATTAACAATATCATAATGTTC
AAGAGGAAACCAAAAGCAACTATCTGAAAAGGTATGCTTTCGTATATTtg
acagttttgtttcatttaaaacaagctctttttttggcaccaagtcaaaa
actttacagtttttcaaatctgtatgagaaaggcaactgcatacacttga
tttaaaatttcctaCACAAATTCTAAAGCGAGCATCATTCTTTGACAAAA
AAGTATCACTTTTTGAAAGGATAGATATGGTATGTTGTCGATGCAagggg
tgctaattttggttgattgtttcatatttcccatgttcaacgtacgaacc
gtggaaacgtattctttcttactcaaataagaaaatgatcttttataatc
cattaaacaatcttccaaaagcaaTGTGTTACATTCTAAGAGCAACTCAA
CGAACGTCGTGTTTATGAGGCCCTGGACTTAACGACATGCCATTATTCAA
TGATATTGGCTTTTAACATTCCAATGAAAAGTTTGCACTATTCaagctat
aatttttgaaaagggatgcttcttattcttgtaaaaaccttcatttgtaa
aaatgatgcTCTCAAATGATAAACCTTATTGTTTGTGGTAGGATAAATGG
AATTCAAAAAGCTGTGgctttttttattcaagaaaatattatgtttctta
tgtttatcaaaaatcactctgctttctggtctttgttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053944TCONS_00053944Clytia hemisphaericatranscript
TCONS_00053945TCONS_00053945Clytia hemisphaericatranscript
TCONS_00053946TCONS_00053946Clytia hemisphaericatranscript
TCONS_00053947TCONS_00053947Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_237supercontigscaffold_237:500486..504223 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.34	6.03	13.46	19.29	5.43	2.55	0.9	1.21	0.45	0.16	1.26	0.62	0.64	0.27	0.46	1.17	0.09	0.26	0.5	0.21	0.56	0.63	1.69	2.41	0.97	1.22	0.16	0.15	10.77	6.89