XLOC_033645 (gene) - C. hemisphaerica

Overview
NameXLOC_033645
Unique NameXLOC_033645
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_228:528840..532763+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033645 ID=XLOC_033645|Name=XLOC_033645|organism=Clytia hemisphaerica|type=gene|length=3924bp|location=Sequence derived from alignment at scaffold_228:528840..532763+ (Clytia hemisphaerica)
CAGCAACATTTTATAACCTTTGCTTTCAGCTTGAAACAGCCAATCAAAAT
TTGTTATCAGAAGAAAGCCAAGCAGACTGCCTTAAATCAGAAATGAACTT
TTTGAGGTAATACTTCATGCCATTTGTGGTCTAGgtttgtttttaatgaa
atctgaataatttggtttttacttgtttctttaaaaaaaaatatcttgAC
AAAGATAATTTTAGGTGATCCTAAACTAACTAACTGAGGTTTTGTAATTA
TTGATTTTTATATCTTATGTTgactttttaaaataatgattTATTTGATT
TCCTTCTCTTTATTTTTTAGACAAGAGAACACCAAGCTTGAAAGTTATCT
TAGTAGCTTACCCACATGTGAAGAGTTTGCTGAGATGAAAAAGGAGGTGT
GTTTtggtttttctcttttattttcaaaattttgatttttaaacatAGTA
GTTCATActttaaaacttaaattatttttttcagataaaGGCTTTGAGAG
AAGAGCGAGACCAGCTTCTTACGCATAAAGAAAACATTTGTAGTAGTTAC
AAAGATACCAAACGAGAACTTATTTTCAAGGTTAATTTCCAATTTATTAA
TGATTGTATTGATTCACTTGATTAACTTCCCACAAAAATGTCAGGCTCTT
GTCTTTTAAATGCAAAGTTTACTAAATACATGAAAATAAGGACTAGATCA
TtgatagaaaaattcaaaatgtctttaTCTTAAAGAGAAATTATGTGAAT
TTTTTAGCAATCCCAACTAGACAAGGCAGGAAGGAAGATCAACGAACTTC
AAAATGAAGTGTCACAGtatgtaaatttattttctgaattttttttgtga
aaatttgagTTGTTATTTAGCAATTTCTTTGCTCTGATTTCTTCTTGTTT
ATAATTATACTACTTACAAGGTTACATCCTCACACCTAATAATATTATAA
GCTTCTTGTTGATTAATCtttcaatctttcaaaaaacaattGTCTTCTGA
CATAATATTGAGAATTCCCAAAAAGTTGTTATGGGCAAAATAATTGTTTT
CTCAAGACAGCTAGGTCTCTCTTGGCCTTCCATTTCGTTATGAAACCGCT
GTTCTGGTGCTTGGCTACACTGTTCTGGCTATATTTGAGGCTATTGCTTT
CAGCAGCTTTCAGCAAGAATTTCATATGTATGTTTGAATATGATACAAGA
AGACCCCAAAATGAATGGATGAAGCTATTTGCTATCATTTAGTGCTCTTT
TATTTATGCTAGGTTAAATCGGCATTTGGAGAAGTATGACAGACTGGGTC
CCATATCCATAAGTGATTTTCAGAAACAACAGAATGATATGACAACATTA
CAAGCAGAAAACACTGAACTGAAACAGgttttttatgctatttgaagcCT
TGAGATTTATAATAGATTATGGTGACTTTAgatatcttttctttcttaaa
acATACTCATAAAAAACAATGTCCTTTTATCAGTAAAGTAAACATTTAGT
CTTTTTTCTAGAATCTGGCTAAAACTCAAAAGAAGTTGACACGTTTCCAG
TATGAACTAGTTGCCAGAAAGaaagaaagtcaaaatgaaaAGCAAAAGCT
ACAGCATGATGTGGGATGTTTTCAAGATAaattacaagaaaaaagtgctT
TCATCACGCaggttaaaaatttttaaactgtaCTGTACACTCCAATCTAT
CATCCTTCCTGCAGCTTCCTGTTCAATATTAAATCTTTCTCATATGAGAT
GTTAAACCAGGATAAGAAGTACTATTGTTTTGCAATCTCATCCACctttt
actttgatttttttatagatTCAAGCAAGAAATCAGgaacttttaaaaga
aaaattgatggTAGAAGGGAAATTGAAAAAGGtaataaaatatcaaatat
ttctAGGACCTGTAAAATTAAGCGTATATTTCAGCTTGTTTACACCAACA
GTGTCTCTCTGGGGTTAGGTGGTTACTGCATTTTAACATGCAAAATGATA
TATTTCTACTCCAGCAGAACTTCGAAaatcttttggaaattttattgtCA
CATAAATAACCTAACCTTATCTTTTTACAGCTAGAAGATAAATATACTGA
CGAGATGGAGCAAACCCTATGTTCTGTATTTTCTGCTGTAAGCTGttttt
tattgtattattaaatttaatgtaaatttttatgAAAGCTTGGGTTTTTT
CTTTATGCTGTTGAATGACTGGTATAACAGTCTCCAAGACATGTTTCATC
AACTTGGTCTTACCAGATAACGTTGAACCAACAATTAATGTTATTTTATT
TGACTATAATATTTCGAACTGGCCTATCTTCAGGTCTAAAAATAGTTAAA
TTAAAATCCAGTTTTATGTTTGATTATTTCGTCTTAGATAGTAAGAATGT
GCAGCCAAACATAACACAGTTTGAAAACAAAGTTTGCCAAGGCAATATaa
attctttgatattttttagacATTGAGTTGTTTTGACGAGGTTAAAAACT
TTGTAACACTTTGCCAGAAGATGTCATTGGGTGAAGAACCAGATATCCAA
CTTTTGCTCGGTCTAAGAGGTATCAATTTTTACTTTGATATCTTTTGTGA
AAACTTAATAACATTGTTGTGGAGCAAATTATCCATCCACTATTTTTGTC
CATCCTACTGAATCTATTGTTAAATCAAGGATCCTTGTGTTAAGGTAGGT
TATACTCTGTTACAGTGTGCAAAGTTGGAATCACAGGTGAAAGAGTGGAT
TTCTCTAGCACCTCTAGGGAGATATGTGGGATaaactttggagaaatttt
ggattccttactttaaaaagatttttatcaGTGGTATtagttttactttt
tcattttcatgtttaatttctttgaattttcatttaGATTCACCAAGGGA
AGAACAAAAGAAAGCCAAATCTGATCTTAATATCAAAGAGTTAAAAGAAA
GACTTGAAAAGATATCACAAATCAAGAATGATTTAGACGGATTGAGGTCA
ATGATTGCTGAAAGGCATGCAGAAGAGATTGGGAAAAATATGTGTATTAC
TCAATAACATATGCTTTATGGTATTCAATTTGTTTGGGACGAGTTGTCTT
TGGAGTGGACATACTTCTTATTCCCTTCCTCGTCTGTAATTCACATTACA
TCATCGCAACAAATGGTTTCATGAATGATGTCTTTCTCTTTCGCCACTGA
ATGATGGCCTTAGAATCACCAAAAGATGTTTATTAAAGTAACCATTGAAA
AATGAAGTAATCAAAGCCATTAATATGATGTAATGTcattaataaaacaa
aaattcctGGTTTTTGGATGGCATATAAATATGGTTGAAGTTGGATATCG
TCGGTTCTAAAAAAATGCCTTTCTAGTTAGCcctcaattttaagaaaatg
tcACCTTCTAAATATTTTTATGCATGGTCCCTTAGGAATTTCTCTATACT
TTTTAGACCAAACTAAATAGGTTTATCTTTGAGTGtccctttcttttgtt
ttagtttgGTTTGTTATTTTTTACAGATAGTTTATAATATATTGTTTcct
taagattttttaaagactttttatttatttaataaTGTCTGATATGTACA
TAATATTAGAAATAGAGATATTACAAACGATGTGCTATGGTATAAGGTAA
CAAgaactaaaaaagctttaatttaCTCTAAGGATTTCCATTGTAAAATT
AGATTATTAATGTTTCTTGTCACTTAGCTGcactttttattaaattatGG
GCATCTGCACCTTCTAATTATATAGACGAAAAAATTTTGTACATAATTTT
TAGATGATAAACAAAATGTTTCATGGGTATACcaggtgcaccaaaaaaaa
agtatacaactttgtcaagatattgtgagcttcaggatttaaattttttg
ttcattctttttttatcgcataga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053307TCONS_00053307Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053307-proteinTCONS_00053307-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:528840..532763 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.36	12.25	19.22	21.47	29.32	22.87	21.29	21.83	13.94	12.82	11.79	10.72	7.37	6.69	6.49	7.56	9.88	11.26	4.64	5.84	7.21	7.36	13.14	12.62	18.69	19.74	6.2	4.98	9.4	9.64