TCONS_00053307 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053307
Unique NameTCONS_00053307
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1859

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053307 ID=TCONS_00053307|Name=TCONS_00053307|organism=Clytia hemisphaerica|type=transcript|length=1859bp
CAGCAACATTTTATAACCTTTGCTTTCAGCTTGAAACAGCCAATCAAAAT
TTGTTATCAGAAGAAAGCCAAGCAGACTGCCTTAAATCAGAAATGAACTT
TTTGAGACAAGAGAACACCAAGCTTGAAAGTTATCTTAGTAGCTTACCCA
CATGTGAAGAGTTTGCTGAGATGAAAAAGGAGataaaGGCTTTGAGAGAA
GAGCGAGACCAGCTTCTTACGCATAAAGAAAACATTTGTAGTAGTTACAA
AGATACCAAACGAGAACTTATTTTCAAGCAATCCCAACTAGACAAGGCAG
GAAGGAAGATCAACGAACTTCAAAATGAAGTGTCACAGTTAAATCGGCAT
TTGGAGAAGTATGACAGACTGGGTCCCATATCCATAAGTGATTTTCAGAA
ACAACAGAATGATATGACAACATTACAAGCAGAAAACACTGAACTGAAAC
AGAATCTGGCTAAAACTCAAAAGAAGTTGACACGTTTCCAGTATGAACTA
GTTGCCAGAAAGaaagaaagtcaaaatgaaaAGCAAAAGCTACAGCATGA
TGTGGGATGTTTTCAAGATAaattacaagaaaaaagtgctTTCATCACGC
agatTCAAGCAAGAAATCAGgaacttttaaaagaaaaattgatggTAGAA
GGGAAATTGAAAAAGCTAGAAGATAAATATACTGACGAGATGGAGCAAAC
CCTATGTTCTGTATTTTCTGCTacATTGAGTTGTTTTGACGAGGTTAAAA
ACTTTGTAACACTTTGCCAGAAGATGTCATTGGGTGAAGAACCAGATATC
CAACTTTTGCTCGGTCTAAGAGATTCACCAAGGGAAGAACAAAAGAAAGC
CAAATCTGATCTTAATATCAAAGAGTTAAAAGAAAGACTTGAAAAGATAT
CACAAATCAAGAATGATTTAGACGGATTGAGGTCAATGATTGCTGAAAGG
CATGCAGAAGAGATTGGGAAAAATATGTGTATTACTCAATAACATATGCT
TTATGGTATTCAATTTGTTTGGGACGAGTTGTCTTTGGAGTGGACATACT
TCTTATTCCCTTCCTCGTCTGTAATTCACATTACATCATCGCAACAAATG
GTTTCATGAATGATGTCTTTCTCTTTCGCCACTGAATGATGGCCTTAGAA
TCACCAAAAGATGTTTATTAAAGTAACCATTGAAAAATGAAGTAATCAAA
GCCATTAATATGATGTAATGTcattaataaaacaaaaattcctGGTTTTT
GGATGGCATATAAATATGGTTGAAGTTGGATATCGTCGGTTCTAAAAAAA
TGCCTTTCTAGTTAGCcctcaattttaagaaaatgtcACCTTCTAAATAT
TTTTATGCATGGTCCCTTAGGAATTTCTCTATACTTTTTAGACCAAACTA
AATAGGTTTATCTTTGAGTGtccctttcttttgttttagtttgGTTTGTT
ATTTTTTACAGATAGTTTATAATATATTGTTTccttaagattttttaaag
actttttatttatttaataaTGTCTGATATGTACATAATATTAGAAATAG
AGATATTACAAACGATGTGCTATGGTATAAGGTAACAAgaactaaaaaag
ctttaatttaCTCTAAGGATTTCCATTGTAAAATTAGATTATTAATGTTT
CTTGTCACTTAGCTGcactttttattaaattatGGGCATCTGCACCTTCT
AATTATATAGACGAAAAAATTTTGTACATAATTTTTAGATGATAAACAAA
ATGTTTCATGGGTATACcaggtgcaccaaaaaaaaagtatacaactttgt
caagatattgtgagcttcaggatttaaattttttgttcattcttttttta
tcgcataga
Run BLAST on NCBI

protein sequence of TCONS_00053307-protein

>TCONS_00053307-protein ID=TCONS_00053307-protein|Name=TCONS_00053307-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
ATFYNLCFQLETANQNLLSEESQADCLKSEMNFLRQENTKLESYLSSLPT
CEEFAEMKKEIKALREERDQLLTHKENICSSYKDTKRELIFKQSQLDKAG
RKINELQNEVSQLNRHLEKYDRLGPISISDFQKQQNDMTTLQAENTELKQ
NLAKTQKKLTRFQYELVARKKESQNEKQKLQHDVGCFQDKLQEKSAFITQ
IQARNQELLKEKLMVEGKLKKLEDKYTDEMEQTLCSVFSATLSCFDEVKN
FVTLCQKMSLGEEPDIQLLLGLRDSPREEQKKAKSDLNIKELKERLEKIS
QIKNDLDGLRSMIAERHAEEIGKNMCITQ
Run BLAST on NCBI

transcript from alignment at scaffold_228:528840..532763+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053307 ID=TCONS_00053307|Name=TCONS_00053307|organism=Clytia hemisphaerica|type=transcript|length=3924bp|location=Sequence derived from alignment at scaffold_228:528840..532763+ (Clytia hemisphaerica)
CAGCAACATTTTATAACCTTTGCTTTCAGCTTGAAACAGCCAATCAAAAT
TTGTTATCAGAAGAAAGCCAAGCAGACTGCCTTAAATCAGAAATGAACTT
TTTGAGGTAATACTTCATGCCATTTGTGGTCTAGgtttgtttttaatgaa
atctgaataatttggtttttacttgtttctttaaaaaaaaatatcttgAC
AAAGATAATTTTAGGTGATCCTAAACTAACTAACTGAGGTTTTGTAATTA
TTGATTTTTATATCTTATGTTgactttttaaaataatgattTATTTGATT
TCCTTCTCTTTATTTTTTAGACAAGAGAACACCAAGCTTGAAAGTTATCT
TAGTAGCTTACCCACATGTGAAGAGTTTGCTGAGATGAAAAAGGAGGTGT
GTTTtggtttttctcttttattttcaaaattttgatttttaaacatAGTA
GTTCATActttaaaacttaaattatttttttcagataaaGGCTTTGAGAG
AAGAGCGAGACCAGCTTCTTACGCATAAAGAAAACATTTGTAGTAGTTAC
AAAGATACCAAACGAGAACTTATTTTCAAGGTTAATTTCCAATTTATTAA
TGATTGTATTGATTCACTTGATTAACTTCCCACAAAAATGTCAGGCTCTT
GTCTTTTAAATGCAAAGTTTACTAAATACATGAAAATAAGGACTAGATCA
TtgatagaaaaattcaaaatgtctttaTCTTAAAGAGAAATTATGTGAAT
TTTTTAGCAATCCCAACTAGACAAGGCAGGAAGGAAGATCAACGAACTTC
AAAATGAAGTGTCACAGtatgtaaatttattttctgaattttttttgtga
aaatttgagTTGTTATTTAGCAATTTCTTTGCTCTGATTTCTTCTTGTTT
ATAATTATACTACTTACAAGGTTACATCCTCACACCTAATAATATTATAA
GCTTCTTGTTGATTAATCtttcaatctttcaaaaaacaattGTCTTCTGA
CATAATATTGAGAATTCCCAAAAAGTTGTTATGGGCAAAATAATTGTTTT
CTCAAGACAGCTAGGTCTCTCTTGGCCTTCCATTTCGTTATGAAACCGCT
GTTCTGGTGCTTGGCTACACTGTTCTGGCTATATTTGAGGCTATTGCTTT
CAGCAGCTTTCAGCAAGAATTTCATATGTATGTTTGAATATGATACAAGA
AGACCCCAAAATGAATGGATGAAGCTATTTGCTATCATTTAGTGCTCTTT
TATTTATGCTAGGTTAAATCGGCATTTGGAGAAGTATGACAGACTGGGTC
CCATATCCATAAGTGATTTTCAGAAACAACAGAATGATATGACAACATTA
CAAGCAGAAAACACTGAACTGAAACAGgttttttatgctatttgaagcCT
TGAGATTTATAATAGATTATGGTGACTTTAgatatcttttctttcttaaa
acATACTCATAAAAAACAATGTCCTTTTATCAGTAAAGTAAACATTTAGT
CTTTTTTCTAGAATCTGGCTAAAACTCAAAAGAAGTTGACACGTTTCCAG
TATGAACTAGTTGCCAGAAAGaaagaaagtcaaaatgaaaAGCAAAAGCT
ACAGCATGATGTGGGATGTTTTCAAGATAaattacaagaaaaaagtgctT
TCATCACGCaggttaaaaatttttaaactgtaCTGTACACTCCAATCTAT
CATCCTTCCTGCAGCTTCCTGTTCAATATTAAATCTTTCTCATATGAGAT
GTTAAACCAGGATAAGAAGTACTATTGTTTTGCAATCTCATCCACctttt
actttgatttttttatagatTCAAGCAAGAAATCAGgaacttttaaaaga
aaaattgatggTAGAAGGGAAATTGAAAAAGGtaataaaatatcaaatat
ttctAGGACCTGTAAAATTAAGCGTATATTTCAGCTTGTTTACACCAACA
GTGTCTCTCTGGGGTTAGGTGGTTACTGCATTTTAACATGCAAAATGATA
TATTTCTACTCCAGCAGAACTTCGAAaatcttttggaaattttattgtCA
CATAAATAACCTAACCTTATCTTTTTACAGCTAGAAGATAAATATACTGA
CGAGATGGAGCAAACCCTATGTTCTGTATTTTCTGCTGTAAGCTGttttt
tattgtattattaaatttaatgtaaatttttatgAAAGCTTGGGTTTTTT
CTTTATGCTGTTGAATGACTGGTATAACAGTCTCCAAGACATGTTTCATC
AACTTGGTCTTACCAGATAACGTTGAACCAACAATTAATGTTATTTTATT
TGACTATAATATTTCGAACTGGCCTATCTTCAGGTCTAAAAATAGTTAAA
TTAAAATCCAGTTTTATGTTTGATTATTTCGTCTTAGATAGTAAGAATGT
GCAGCCAAACATAACACAGTTTGAAAACAAAGTTTGCCAAGGCAATATaa
attctttgatattttttagacATTGAGTTGTTTTGACGAGGTTAAAAACT
TTGTAACACTTTGCCAGAAGATGTCATTGGGTGAAGAACCAGATATCCAA
CTTTTGCTCGGTCTAAGAGGTATCAATTTTTACTTTGATATCTTTTGTGA
AAACTTAATAACATTGTTGTGGAGCAAATTATCCATCCACTATTTTTGTC
CATCCTACTGAATCTATTGTTAAATCAAGGATCCTTGTGTTAAGGTAGGT
TATACTCTGTTACAGTGTGCAAAGTTGGAATCACAGGTGAAAGAGTGGAT
TTCTCTAGCACCTCTAGGGAGATATGTGGGATaaactttggagaaatttt
ggattccttactttaaaaagatttttatcaGTGGTATtagttttactttt
tcattttcatgtttaatttctttgaattttcatttaGATTCACCAAGGGA
AGAACAAAAGAAAGCCAAATCTGATCTTAATATCAAAGAGTTAAAAGAAA
GACTTGAAAAGATATCACAAATCAAGAATGATTTAGACGGATTGAGGTCA
ATGATTGCTGAAAGGCATGCAGAAGAGATTGGGAAAAATATGTGTATTAC
TCAATAACATATGCTTTATGGTATTCAATTTGTTTGGGACGAGTTGTCTT
TGGAGTGGACATACTTCTTATTCCCTTCCTCGTCTGTAATTCACATTACA
TCATCGCAACAAATGGTTTCATGAATGATGTCTTTCTCTTTCGCCACTGA
ATGATGGCCTTAGAATCACCAAAAGATGTTTATTAAAGTAACCATTGAAA
AATGAAGTAATCAAAGCCATTAATATGATGTAATGTcattaataaaacaa
aaattcctGGTTTTTGGATGGCATATAAATATGGTTGAAGTTGGATATCG
TCGGTTCTAAAAAAATGCCTTTCTAGTTAGCcctcaattttaagaaaatg
tcACCTTCTAAATATTTTTATGCATGGTCCCTTAGGAATTTCTCTATACT
TTTTAGACCAAACTAAATAGGTTTATCTTTGAGTGtccctttcttttgtt
ttagtttgGTTTGTTATTTTTTACAGATAGTTTATAATATATTGTTTcct
taagattttttaaagactttttatttatttaataaTGTCTGATATGTACA
TAATATTAGAAATAGAGATATTACAAACGATGTGCTATGGTATAAGGTAA
CAAgaactaaaaaagctttaatttaCTCTAAGGATTTCCATTGTAAAATT
AGATTATTAATGTTTCTTGTCACTTAGCTGcactttttattaaattatGG
GCATCTGCACCTTCTAATTATATAGACGAAAAAATTTTGTACATAATTTT
TAGATGATAAACAAAATGTTTCATGGGTATACcaggtgcaccaaaaaaaa
agtatacaactttgtcaagatattgtgagcttcaggatttaaattttttg
ttcattctttttttatcgcataga

Coding sequence (CDS) from alignment at scaffold_228:528840..532763+

>TCONS_00053307 ID=TCONS_00053307|Name=TCONS_00053307|organism=Clytia hemisphaerica|type=CDS|length=9900bp|location=Sequence derived from alignment at scaffold_228:528840..532763+ (Clytia hemisphaerica)
GCAACATTTTATAACCTTTGCTTTCAGCTTGAAACAGCCAATCAAAATTT
GTTATCAGAAGAAAGCCAAGCAGACTGCCTTAAATCAGAAATGAACTTTT
TGAGACAAGAGAACACCAAGCTTGAAAGTTATCTTAGTAGCTTACCCACA
TGTGAAGAGTTTGCTGAGATGAAAAAGGAGataaaGGCTTTGAGAGAAGA
GCGAGACCAGCTTCTTACGCATAAAGAAAACATTTGTAGTAGTTACAAAG
ATACCAAACGAGAACTTATTTTCAAGCAATCCCAACTAGACAAGGCAGGA
AGGAAGATCAACGAACTTCAAAATGAAGTGTCACAGTTAAATCGGCATTT
GGAGAAGTATGACAGACTGGGTCCCATATCCATAAGTGATTTTCAGAAAC
AACAGAATGATATGACAACATTACAAGCAGAAAACACTGAACTGAAACAG
AATCTGGCTAAAACTCAAAAGAAGTTGACACGTTTCCAGTATGAACTAGT
TGCCAGAAAGaaagaaagtcaaaatgaaaAGCAAAAGCTACAGCATGATG
TGGGATGTTTTCAAGATAaattacaagaaaaaagtgctTTCATCACGCag
atTCAAGCAAGAAATCAGgaacttttaaaagaaaaattgatggTAGAAGG
GAAATTGAAAAAGCTAGAAGATAAATATACTGACGAGATGGAGCAAACCC
TATGTTCTGTATTTTCTGCTacATTGAGTTGTTTTGACGAGGTTAAAAAC
TTTGTAACACTTTGCCAGAAGATGTCATTGGGTGAAGAACCAGATATCCA
ACTTTTGCTCGGTCTAAGAGATTCACCAAGGGAAGAACAAAAGAAAGCCA
AATCTGATCTTAATATCAAAGAGTTAAAAGAAAGACTTGAAAAGATATCA
CAAATCAAGAATGATTTAGACGGATTGAGGTCAATGATTGCTGAAAGGCA
TGCAGAAGAGATTGGGAAAAATATGTGTATTACTCAATAAGCAACATTTT
ATAACCTTTGCTTTCAGCTTGAAACAGCCAATCAAAATTTGTTATCAGAA
GAAAGCCAAGCAGACTGCCTTAAATCAGAAATGAACTTTTTGAGACAAGA
GAACACCAAGCTTGAAAGTTATCTTAGTAGCTTACCCACATGTGAAGAGT
TTGCTGAGATGAAAAAGGAGataaaGGCTTTGAGAGAAGAGCGAGACCAG
CTTCTTACGCATAAAGAAAACATTTGTAGTAGTTACAAAGATACCAAACG
AGAACTTATTTTCAAGCAATCCCAACTAGACAAGGCAGGAAGGAAGATCA
ACGAACTTCAAAATGAAGTGTCACAGTTAAATCGGCATTTGGAGAAGTAT
GACAGACTGGGTCCCATATCCATAAGTGATTTTCAGAAACAACAGAATGA
TATGACAACATTACAAGCAGAAAACACTGAACTGAAACAGAATCTGGCTA
AAACTCAAAAGAAGTTGACACGTTTCCAGTATGAACTAGTTGCCAGAAAG
aaagaaagtcaaaatgaaaAGCAAAAGCTACAGCATGATGTGGGATGTTT
TCAAGATAaattacaagaaaaaagtgctTTCATCACGCagatTCAAGCAA
GAAATCAGgaacttttaaaagaaaaattgatggTAGAAGGGAAATTGAAA
AAGCTAGAAGATAAATATACTGACGAGATGGAGCAAACCCTATGTTCTGT
ATTTTCTGCTacATTGAGTTGTTTTGACGAGGTTAAAAACTTTGTAACAC
TTTGCCAGAAGATGTCATTGGGTGAAGAACCAGATATCCAACTTTTGCTC
GGTCTAAGAGATTCACCAAGGGAAGAACAAAAGAAAGCCAAATCTGATCT
TAATATCAAAGAGTTAAAAGAAAGACTTGAAAAGATATCACAAATCAAGA
ATGATTTAGACGGATTGAGGTCAATGATTGCTGAAAGGCATGCAGAAGAG
ATTGGGAAAAATATGTGTATTACTCAATAAGCAACATTTTATAACCTTTG
CTTTCAGCTTGAAACAGCCAATCAAAATTTGTTATCAGAAGAAAGCCAAG
CAGACTGCCTTAAATCAGAAATGAACTTTTTGAGACAAGAGAACACCAAG
CTTGAAAGTTATCTTAGTAGCTTACCCACATGTGAAGAGTTTGCTGAGAT
GAAAAAGGAGataaaGGCTTTGAGAGAAGAGCGAGACCAGCTTCTTACGC
ATAAAGAAAACATTTGTAGTAGTTACAAAGATACCAAACGAGAACTTATT
TTCAAGCAATCCCAACTAGACAAGGCAGGAAGGAAGATCAACGAACTTCA
AAATGAAGTGTCACAGTTAAATCGGCATTTGGAGAAGTATGACAGACTGG
GTCCCATATCCATAAGTGATTTTCAGAAACAACAGAATGATATGACAACA
TTACAAGCAGAAAACACTGAACTGAAACAGAATCTGGCTAAAACTCAAAA
GAAGTTGACACGTTTCCAGTATGAACTAGTTGCCAGAAAGaaagaaagtc
aaaatgaaaAGCAAAAGCTACAGCATGATGTGGGATGTTTTCAAGATAaa
ttacaagaaaaaagtgctTTCATCACGCagatTCAAGCAAGAAATCAGga
acttttaaaagaaaaattgatggTAGAAGGGAAATTGAAAAAGCTAGAAG
ATAAATATACTGACGAGATGGAGCAAACCCTATGTTCTGTATTTTCTGCT
acATTGAGTTGTTTTGACGAGGTTAAAAACTTTGTAACACTTTGCCAGAA
GATGTCATTGGGTGAAGAACCAGATATCCAACTTTTGCTCGGTCTAAGAG
ATTCACCAAGGGAAGAACAAAAGAAAGCCAAATCTGATCTTAATATCAAA
GAGTTAAAAGAAAGACTTGAAAAGATATCACAAATCAAGAATGATTTAGA
CGGATTGAGGTCAATGATTGCTGAAAGGCATGCAGAAGAGATTGGGAAAA
ATATGTGTATTACTCAATAAGCAACATTTTATAACCTTTGCTTTCAGCTT
GAAACAGCCAATCAAAATTTGTTATCAGAAGAAAGCCAAGCAGACTGCCT
TAAATCAGAAATGAACTTTTTGAGACAAGAGAACACCAAGCTTGAAAGTT
ATCTTAGTAGCTTACCCACATGTGAAGAGTTTGCTGAGATGAAAAAGGAG
ataaaGGCTTTGAGAGAAGAGCGAGACCAGCTTCTTACGCATAAAGAAAA
CATTTGTAGTAGTTACAAAGATACCAAACGAGAACTTATTTTCAAGCAAT
CCCAACTAGACAAGGCAGGAAGGAAGATCAACGAACTTCAAAATGAAGTG
TCACAGTTAAATCGGCATTTGGAGAAGTATGACAGACTGGGTCCCATATC
CATAAGTGATTTTCAGAAACAACAGAATGATATGACAACATTACAAGCAG
AAAACACTGAACTGAAACAGAATCTGGCTAAAACTCAAAAGAAGTTGACA
CGTTTCCAGTATGAACTAGTTGCCAGAAAGaaagaaagtcaaaatgaaaA
GCAAAAGCTACAGCATGATGTGGGATGTTTTCAAGATAaattacaagaaa
aaagtgctTTCATCACGCagatTCAAGCAAGAAATCAGgaacttttaaaa
gaaaaattgatggTAGAAGGGAAATTGAAAAAGCTAGAAGATAAATATAC
TGACGAGATGGAGCAAACCCTATGTTCTGTATTTTCTGCTacATTGAGTT
GTTTTGACGAGGTTAAAAACTTTGTAACACTTTGCCAGAAGATGTCATTG
GGTGAAGAACCAGATATCCAACTTTTGCTCGGTCTAAGAGATTCACCAAG
GGAAGAACAAAAGAAAGCCAAATCTGATCTTAATATCAAAGAGTTAAAAG
AAAGACTTGAAAAGATATCACAAATCAAGAATGATTTAGACGGATTGAGG
TCAATGATTGCTGAAAGGCATGCAGAAGAGATTGGGAAAAATATGTGTAT
TACTCAATAAGCAACATTTTATAACCTTTGCTTTCAGCTTGAAACAGCCA
ATCAAAATTTGTTATCAGAAGAAAGCCAAGCAGACTGCCTTAAATCAGAA
ATGAACTTTTTGAGACAAGAGAACACCAAGCTTGAAAGTTATCTTAGTAG
CTTACCCACATGTGAAGAGTTTGCTGAGATGAAAAAGGAGataaaGGCTT
TGAGAGAAGAGCGAGACCAGCTTCTTACGCATAAAGAAAACATTTGTAGT
AGTTACAAAGATACCAAACGAGAACTTATTTTCAAGCAATCCCAACTAGA
CAAGGCAGGAAGGAAGATCAACGAACTTCAAAATGAAGTGTCACAGTTAA
ATCGGCATTTGGAGAAGTATGACAGACTGGGTCCCATATCCATAAGTGAT
TTTCAGAAACAACAGAATGATATGACAACATTACAAGCAGAAAACACTGA
ACTGAAACAGAATCTGGCTAAAACTCAAAAGAAGTTGACACGTTTCCAGT
ATGAACTAGTTGCCAGAAAGaaagaaagtcaaaatgaaaAGCAAAAGCTA
CAGCATGATGTGGGATGTTTTCAAGATAaattacaagaaaaaagtgctTT
CATCACGCagatTCAAGCAAGAAATCAGgaacttttaaaagaaaaattga
tggTAGAAGGGAAATTGAAAAAGCTAGAAGATAAATATACTGACGAGATG
GAGCAAACCCTATGTTCTGTATTTTCTGCTacATTGAGTTGTTTTGACGA
GGTTAAAAACTTTGTAACACTTTGCCAGAAGATGTCATTGGGTGAAGAAC
CAGATATCCAACTTTTGCTCGGTCTAAGAGATTCACCAAGGGAAGAACAA
AAGAAAGCCAAATCTGATCTTAATATCAAAGAGTTAAAAGAAAGACTTGA
AAAGATATCACAAATCAAGAATGATTTAGACGGATTGAGGTCAATGATTG
CTGAAAGGCATGCAGAAGAGATTGGGAAAAATATGTGTATTACTCAATAA
GCAACATTTTATAACCTTTGCTTTCAGCTTGAAACAGCCAATCAAAATTT
GTTATCAGAAGAAAGCCAAGCAGACTGCCTTAAATCAGAAATGAACTTTT
TGAGACAAGAGAACACCAAGCTTGAAAGTTATCTTAGTAGCTTACCCACA
TGTGAAGAGTTTGCTGAGATGAAAAAGGAGataaaGGCTTTGAGAGAAGA
GCGAGACCAGCTTCTTACGCATAAAGAAAACATTTGTAGTAGTTACAAAG
ATACCAAACGAGAACTTATTTTCAAGCAATCCCAACTAGACAAGGCAGGA
AGGAAGATCAACGAACTTCAAAATGAAGTGTCACAGTTAAATCGGCATTT
GGAGAAGTATGACAGACTGGGTCCCATATCCATAAGTGATTTTCAGAAAC
AACAGAATGATATGACAACATTACAAGCAGAAAACACTGAACTGAAACAG
AATCTGGCTAAAACTCAAAAGAAGTTGACACGTTTCCAGTATGAACTAGT
TGCCAGAAAGaaagaaagtcaaaatgaaaAGCAAAAGCTACAGCATGATG
TGGGATGTTTTCAAGATAaattacaagaaaaaagtgctTTCATCACGCag
atTCAAGCAAGAAATCAGgaacttttaaaagaaaaattgatggTAGAAGG
GAAATTGAAAAAGCTAGAAGATAAATATACTGACGAGATGGAGCAAACCC
TATGTTCTGTATTTTCTGCTacATTGAGTTGTTTTGACGAGGTTAAAAAC
TTTGTAACACTTTGCCAGAAGATGTCATTGGGTGAAGAACCAGATATCCA
ACTTTTGCTCGGTCTAAGAGATTCACCAAGGGAAGAACAAAAGAAAGCCA
AATCTGATCTTAATATCAAAGAGTTAAAAGAAAGACTTGAAAAGATATCA
CAAATCAAGAATGATTTAGACGGATTGAGGTCAATGATTGCTGAAAGGCA
TGCAGAAGAGATTGGGAAAAATATGTGTATTACTCAATAAGCAACATTTT
ATAACCTTTGCTTTCAGCTTGAAACAGCCAATCAAAATTTGTTATCAGAA
GAAAGCCAAGCAGACTGCCTTAAATCAGAAATGAACTTTTTGAGACAAGA
GAACACCAAGCTTGAAAGTTATCTTAGTAGCTTACCCACATGTGAAGAGT
TTGCTGAGATGAAAAAGGAGataaaGGCTTTGAGAGAAGAGCGAGACCAG
CTTCTTACGCATAAAGAAAACATTTGTAGTAGTTACAAAGATACCAAACG
AGAACTTATTTTCAAGCAATCCCAACTAGACAAGGCAGGAAGGAAGATCA
ACGAACTTCAAAATGAAGTGTCACAGTTAAATCGGCATTTGGAGAAGTAT
GACAGACTGGGTCCCATATCCATAAGTGATTTTCAGAAACAACAGAATGA
TATGACAACATTACAAGCAGAAAACACTGAACTGAAACAGAATCTGGCTA
AAACTCAAAAGAAGTTGACACGTTTCCAGTATGAACTAGTTGCCAGAAAG
aaagaaagtcaaaatgaaaAGCAAAAGCTACAGCATGATGTGGGATGTTT
TCAAGATAaattacaagaaaaaagtgctTTCATCACGCagatTCAAGCAA
GAAATCAGgaacttttaaaagaaaaattgatggTAGAAGGGAAATTGAAA
AAGCTAGAAGATAAATATACTGACGAGATGGAGCAAACCCTATGTTCTGT
ATTTTCTGCTacATTGAGTTGTTTTGACGAGGTTAAAAACTTTGTAACAC
TTTGCCAGAAGATGTCATTGGGTGAAGAACCAGATATCCAACTTTTGCTC
GGTCTAAGAGATTCACCAAGGGAAGAACAAAAGAAAGCCAAATCTGATCT
TAATATCAAAGAGTTAAAAGAAAGACTTGAAAAGATATCACAAATCAAGA
ATGATTTAGACGGATTGAGGTCAATGATTGCTGAAAGGCATGCAGAAGAG
ATTGGGAAAAATATGTGTATTACTCAATAAGCAACATTTTATAACCTTTG
CTTTCAGCTTGAAACAGCCAATCAAAATTTGTTATCAGAAGAAAGCCAAG
CAGACTGCCTTAAATCAGAAATGAACTTTTTGAGACAAGAGAACACCAAG
CTTGAAAGTTATCTTAGTAGCTTACCCACATGTGAAGAGTTTGCTGAGAT
GAAAAAGGAGataaaGGCTTTGAGAGAAGAGCGAGACCAGCTTCTTACGC
ATAAAGAAAACATTTGTAGTAGTTACAAAGATACCAAACGAGAACTTATT
TTCAAGCAATCCCAACTAGACAAGGCAGGAAGGAAGATCAACGAACTTCA
AAATGAAGTGTCACAGTTAAATCGGCATTTGGAGAAGTATGACAGACTGG
GTCCCATATCCATAAGTGATTTTCAGAAACAACAGAATGATATGACAACA
TTACAAGCAGAAAACACTGAACTGAAACAGAATCTGGCTAAAACTCAAAA
GAAGTTGACACGTTTCCAGTATGAACTAGTTGCCAGAAAGaaagaaagtc
aaaatgaaaAGCAAAAGCTACAGCATGATGTGGGATGTTTTCAAGATAaa
ttacaagaaaaaagtgctTTCATCACGCagatTCAAGCAAGAAATCAGga
acttttaaaagaaaaattgatggTAGAAGGGAAATTGAAAAAGCTAGAAG
ATAAATATACTGACGAGATGGAGCAAACCCTATGTTCTGTATTTTCTGCT
acATTGAGTTGTTTTGACGAGGTTAAAAACTTTGTAACACTTTGCCAGAA
GATGTCATTGGGTGAAGAACCAGATATCCAACTTTTGCTCGGTCTAAGAG
ATTCACCAAGGGAAGAACAAAAGAAAGCCAAATCTGATCTTAATATCAAA
GAGTTAAAAGAAAGACTTGAAAAGATATCACAAATCAAGAATGATTTAGA
CGGATTGAGGTCAATGATTGCTGAAAGGCATGCAGAAGAGATTGGGAAAA
ATATGTGTATTACTCAATAAGCAACATTTTATAACCTTTGCTTTCAGCTT
GAAACAGCCAATCAAAATTTGTTATCAGAAGAAAGCCAAGCAGACTGCCT
TAAATCAGAAATGAACTTTTTGAGACAAGAGAACACCAAGCTTGAAAGTT
ATCTTAGTAGCTTACCCACATGTGAAGAGTTTGCTGAGATGAAAAAGGAG
ataaaGGCTTTGAGAGAAGAGCGAGACCAGCTTCTTACGCATAAAGAAAA
CATTTGTAGTAGTTACAAAGATACCAAACGAGAACTTATTTTCAAGCAAT
CCCAACTAGACAAGGCAGGAAGGAAGATCAACGAACTTCAAAATGAAGTG
TCACAGTTAAATCGGCATTTGGAGAAGTATGACAGACTGGGTCCCATATC
CATAAGTGATTTTCAGAAACAACAGAATGATATGACAACATTACAAGCAG
AAAACACTGAACTGAAACAGAATCTGGCTAAAACTCAAAAGAAGTTGACA
CGTTTCCAGTATGAACTAGTTGCCAGAAAGaaagaaagtcaaaatgaaaA
GCAAAAGCTACAGCATGATGTGGGATGTTTTCAAGATAaattacaagaaa
aaagtgctTTCATCACGCagatTCAAGCAAGAAATCAGgaacttttaaaa
gaaaaattgatggTAGAAGGGAAATTGAAAAAGCTAGAAGATAAATATAC
TGACGAGATGGAGCAAACCCTATGTTCTGTATTTTCTGCTacATTGAGTT
GTTTTGACGAGGTTAAAAACTTTGTAACACTTTGCCAGAAGATGTCATTG
GGTGAAGAACCAGATATCCAACTTTTGCTCGGTCTAAGAGATTCACCAAG
GGAAGAACAAAAGAAAGCCAAATCTGATCTTAATATCAAAGAGTTAAAAG
AAAGACTTGAAAAGATATCACAAATCAAGAATGATTTAGACGGATTGAGG
TCAATGATTGCTGAAAGGCATGCAGAAGAGATTGGGAAAAATATGTGTAT
TACTCAATAAGCAACATTTTATAACCTTTGCTTTCAGCTTGAAACAGCCA
ATCAAAATTTGTTATCAGAAGAAAGCCAAGCAGACTGCCTTAAATCAGAA
ATGAACTTTTTGAGACAAGAGAACACCAAGCTTGAAAGTTATCTTAGTAG
CTTACCCACATGTGAAGAGTTTGCTGAGATGAAAAAGGAGataaaGGCTT
TGAGAGAAGAGCGAGACCAGCTTCTTACGCATAAAGAAAACATTTGTAGT
AGTTACAAAGATACCAAACGAGAACTTATTTTCAAGCAATCCCAACTAGA
CAAGGCAGGAAGGAAGATCAACGAACTTCAAAATGAAGTGTCACAGTTAA
ATCGGCATTTGGAGAAGTATGACAGACTGGGTCCCATATCCATAAGTGAT
TTTCAGAAACAACAGAATGATATGACAACATTACAAGCAGAAAACACTGA
ACTGAAACAGAATCTGGCTAAAACTCAAAAGAAGTTGACACGTTTCCAGT
ATGAACTAGTTGCCAGAAAGaaagaaagtcaaaatgaaaAGCAAAAGCTA
CAGCATGATGTGGGATGTTTTCAAGATAaattacaagaaaaaagtgctTT
CATCACGCagatTCAAGCAAGAAATCAGgaacttttaaaagaaaaattga
tggTAGAAGGGAAATTGAAAAAGCTAGAAGATAAATATACTGACGAGATG
GAGCAAACCCTATGTTCTGTATTTTCTGCTacATTGAGTTGTTTTGACGA
GGTTAAAAACTTTGTAACACTTTGCCAGAAGATGTCATTGGGTGAAGAAC
CAGATATCCAACTTTTGCTCGGTCTAAGAGATTCACCAAGGGAAGAACAA
AAGAAAGCCAAATCTGATCTTAATATCAAAGAGTTAAAAGAAAGACTTGA
AAAGATATCACAAATCAAGAATGATTTAGACGGATTGAGGTCAATGATTG
CTGAAAGGCATGCAGAAGAGATTGGGAAAAATATGTGTATTACTCAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033645XLOC_033645Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053307-proteinTCONS_00053307-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053307-exon-scaffold_228-1491911889:528840..528945TCONS_00053307-exon-scaffold_228-1491911889:528840..528945Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1510915933:528840..528945TCONS_00053307-exon-scaffold_228-1510915933:528840..528945Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1575043694:528840..528945TCONS_00053307-exon-scaffold_228-1575043694:528840..528945Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1491911889:529160..529235TCONS_00053307-exon-scaffold_228-1491911889:529160..529235Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1510915933:529160..529235TCONS_00053307-exon-scaffold_228-1510915933:529160..529235Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1575043694:529160..529235TCONS_00053307-exon-scaffold_228-1575043694:529160..529235Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1491911889:529324..529419TCONS_00053307-exon-scaffold_228-1491911889:529324..529419Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1510915933:529324..529419TCONS_00053307-exon-scaffold_228-1510915933:529324..529419Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1575043694:529324..529419TCONS_00053307-exon-scaffold_228-1575043694:529324..529419Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1491911889:529597..529655TCONS_00053307-exon-scaffold_228-1491911889:529597..529655Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1510915933:529597..529655TCONS_00053307-exon-scaffold_228-1510915933:529597..529655Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1575043694:529597..529655TCONS_00053307-exon-scaffold_228-1575043694:529597..529655Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1491911889:530102..530216TCONS_00053307-exon-scaffold_228-1491911889:530102..530216Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1510915933:530102..530216TCONS_00053307-exon-scaffold_228-1510915933:530102..530216Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1575043694:530102..530216TCONS_00053307-exon-scaffold_228-1575043694:530102..530216Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1491911889:530351..530500TCONS_00053307-exon-scaffold_228-1491911889:530351..530500Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1510915933:530351..530500TCONS_00053307-exon-scaffold_228-1510915933:530351..530500Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1575043694:530351..530500TCONS_00053307-exon-scaffold_228-1575043694:530351..530500Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1491911889:530658..530720TCONS_00053307-exon-scaffold_228-1491911889:530658..530720Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1510915933:530658..530720TCONS_00053307-exon-scaffold_228-1510915933:530658..530720Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1575043694:530658..530720TCONS_00053307-exon-scaffold_228-1575043694:530658..530720Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1491911889:530920..530976TCONS_00053307-exon-scaffold_228-1491911889:530920..530976Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1510915933:530920..530976TCONS_00053307-exon-scaffold_228-1510915933:530920..530976Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1575043694:530920..530976TCONS_00053307-exon-scaffold_228-1575043694:530920..530976Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1491911889:531309..531408TCONS_00053307-exon-scaffold_228-1491911889:531309..531408Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1510915933:531309..531408TCONS_00053307-exon-scaffold_228-1510915933:531309..531408Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1575043694:531309..531408TCONS_00053307-exon-scaffold_228-1575043694:531309..531408Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1491911889:531727..532763TCONS_00053307-exon-scaffold_228-1491911889:531727..532763Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1510915933:531727..532763TCONS_00053307-exon-scaffold_228-1510915933:531727..532763Clytia hemisphaericaexon
TCONS_00053307-exon-scaffold_228-1575043694:531727..532763TCONS_00053307-exon-scaffold_228-1575043694:531727..532763Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:528840..532763 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.3605	12.2479	19.2206	21.4655	29.3155	22.8708	21.2936	21.8251	13.9433	12.8206	11.7852	10.7164	7.36537	6.69237	6.49057	7.56184	9.88311	11.2606	4.63614	5.83598	7.20768	7.36067	13.1351	12.6225	18.6883	19.7398	6.1968	4.98481	9.4048	9.64032
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053307 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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