XLOC_033258 (gene) - C. hemisphaerica

Overview
NameXLOC_033258
Unique NameXLOC_033258
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:678564..682992+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033258 ID=XLOC_033258|Name=XLOC_033258|organism=Clytia hemisphaerica|type=gene|length=4429bp|location=Sequence derived from alignment at scaffold_218:678564..682992+ (Clytia hemisphaerica)
ATTATCAATAAACATATGGTTGAACTTGGACTGTAATGTTATAATGCTTG TGGTCCAGTTTGGTTGCACAATAATGGCTGGTAATGTCAACATACCCGGT GTTAGAGAATTAATGCTTAAGTTTCATTctatgtttgaaaaaattttaca ataCATTGATTCTCTGATTTctattttaacaattttcacAAGTTTTGGAA TAAGCTTAAAATCGCGCAGAGGCAGTCGTCAATTTAGGGCGGATAAGGTC ATTTTGACTTAATTTGaaacattatttttttgaattttttgatctTCATT CCATTTCTCTTCTGAACATTAAACCTACAGCATCATAcgtaaaataattg aaataacaAAAGATGACTGCAACATCTGGAGGATATGACGTTGAGTTTGT TAATGTTCATATCGAATTAAACAATGTCACTTGTGCTATTTGTTTGTACA CATTAAAGGAACCAATGCAATCTGAAGAATGTGGACATCGGTTTTGTAAA ACTTGTGCTGCAAACTTGGCAAAGAGGTATATATATTTATGTTCacaatc aatgtttttgttagGAAGTCATGAATTCAAAAATAAGTTGAGCTCCATGT TCTAGACTATCCAATGTAATTGTTTTTCTATGCACTATAATTATATATCT ATAGGATAGAAAGTAGCAACACTTGTCATGTTAATTGTTCTCAAATGTAT TTTtgttatttcaatattttcatatttttagtcTCAATGGAAAGAAATAC ATTTGCCCACAAGATAGAATGGAGGTGCATGTAAGTTCAGGTTTGATTTC GAACATGATCAGCTTAAGTGAAAAATcccacaaaaattcaaattcaattt tcaaaaccatTACATTGGAACTCTTCAATGTTTTCCGCCAAAAGACAGCT TGGTTCTTAAGTAAATCAGCTGAACAGGCTGATTGCCAACACTCCACCAA CACTCACCCCTTTAGAGAGCATGATACTGCAAGATCTGTTTTGAGATTTA TAGAAAGATCATGAAATGTATAATAGCTGTGTTTTGTTAAATTTTAAGAT TTAGCTTTTGTCTTGTGATTTTAATCTTAGCTTTTCCAAGATAGGGGAAA AGAAAGAGAGATATTGGGTCGGCTAATCAAATGCACCAATAACAAATCTG GCTGTGCGACAAACATAGAGTTGCGATATCTGGATGTGAGTAATCTTCAT TTAAATACAGAtcccaaattttttgaaataatgctTCACTAATCAAACTA TTAAGGCCTTTCATTTGAATACTTCCAATTTTAGGATATTTGTAGTTGTC CTTTTATACttttgggtacctaataagaGCCCCCCCCTGCTGattaattt agcaaaaattttccacccagaaatttttattccaccccccccccctgctt attaagttttgagaataTTTCCACCcgccccgcttattccaaaccccccg ttTTATTAGGTATCCGAGTAATGATGTATCTATCTCTTCAAGGTCCATTT AAAGACATGCGAGTTCCAAATTGTAAAATGCTTGTTTAGCGATTGTGAGG AAAAAGTTCAGAGAAAACTTCTGGAAAAACATAGTTTGGAAGATTGTGAA TACAGGCTTAAGTCTTGTATATTTTGCTTTGAAGATTACTCATTCAATAT GGAAAAGGTATGTGCACTAGAAAAAAAGATGTTTGATTCAATAAATAAAG AATTCCAATGTAATATTATTTTTTCCATTGCCGAGTTGCAAAAAATGAAG ATGCAAACcttaaaattaatatttttcaaagataaCTTGCGAGAAGTTGT TCAGTTTACTTTCATCAGGCCATCACGCAAGTTGTTGAAATTTACTCATT ACGTCATTTCTCCATCAAAATAGCTCATATATCATACATCACGTCCCATA TTTTGCTATAATTACGAATATCATGCTGAGATTCTTGTCACGTCGCCAta ccaaaatgttgtttttgaaaatcatgtCATTGCCTAATAGCTGAGGTTCG TTAAATGGTTTGATAATATCTAGATGTAATAATGATTTCTCtctttatgt ttcttttctctttctttccAGGAGCACATGTGTGATTGCAGCTCTTTTCC ATTATGTTGTGACTATTGTACTGAGATTGACATCCCAAGAAATCAGGTTa acaaagacatttttcaagtttcaaaTTCATACTGCGATGACTTCTTAGCT CAATAAATCGAATTTGAATCAATACTCACAGGAAAAACAATGGACAATTG ATTCTTTCCACTAATGAGGCCCCCTCCCagtggaccttcaattcacgcaa tcacacaaaatgttttcccaaattcatgcattcacgcaatgttttttcgc aattcgCGCAATGTTTTTTCGCATTCCcgcaatttctttttatttctttt tatttcacgcaagtgaaaaagcccattaacgcattcacgcaaactgctgg ggggggggcactaaTTAATCATGAGGTTTAAAATCTACTCGAAATTTATT GAATAGATATCCTTTGGACCTTCAActattattgttgttgtttctattat tattatcatcatTTTTATTGATGATTGCAATTAGCTCTTTTTTGTCATAG ATGCAATGCCATGTCACTGAGAAATGTGTTAAGGTACCTACACCATGTGA GTTTGCACCATTAGGTTGCCAAAAACAGGTATTTATATTCCATGCTTCTG TATTCCTTGTATCCAAATTATGTCATCTTTTAACCGACAATTCTCCCCAT TAATCGCTCGGAAGAATTCCTGAGTTCAAGCAGAATTCAGAGATTTTAAA CTTGATTCTTAAATCCCTGAATCTTCAATACTTTGAATCACGACTTATAT AAAATGTTAACAGATAAAGATgtgttggacctacctcggaggtcctttaa tttaacctttgtccgtccgtccgtccgtccgtctgttaccagcttttctc aagattggctcattagttttttttgatttttggcacaaagttacaaaatg acaatgcccaaaatgagacggagcccgattttcgagaaaaaaaaatccgg aaatatgccggaaaatttttgctcaaagatgcgtattaacaatgcccaaa acatggtcgagtctgatttttgagaaaaaattttttccggccgaaaatgc cggaaatatgccggaaattgccgtttttcgggattttcattggacttttt ccttacaaatGGTtgctttttcattcaaaaatattattaatagcaatgcc catcatcaagcatgtttcaattttcaataaaattttgaagccggaactat ttaaaaatcgccggaacaacctattttcgccggaaagacagtatttcttg aatttcttgagctgtactttatatttttttatgaaattttgcaccaCAGG GATTTAATTTCTCGAAacaacaaaattaattttttttgcgacCATCTaat cttaaattttgaaattttttgtcatttaAGTAATTTCTTTTCTGTTCTTC TAGaataaatgttttcttttataagcaagtgtctgcccctatatcaggct cgcattatgcttagcattctattgttcttaaacaataaAGCCATTGTTTA GATCATATGTGATTTTTTTGCTGAATATTATACTATTTTACTATTGTTAT TATGTGGTTTGGACACTGCTTTATTTCAGACTACCATTGCTAGCAAAGAA AGTCACAGGATTGAAGCAACTCAGCATCATTTGGCACTTGCTCTAAACAA ACTCATTGAACAGCAGGATGAACTCAAACAAAAATCAGACCAACTTTTTT CACTGAGATCAGATCATGAGAGATTGAAATCAAAGCTTGATGCCCAGCCA TCCATTTCCCAGTTCAAAGATGAACATATTTTTCACTTAGataattttgc aaaattgtTTGAAGAAGCTGAAACTGGTGAAGCATTTACACTTCATATGT ATACATCACAGCTACACAAGATCAcaatttctatatatttcaaAGGTTAC ACTCAAGATTGCAAAGACAATGTTTCTGTGTTTTTTCAATGCACTCAAGG TAGTTTTGACGATGTTGCTAAATGGCCAATGGGAGGAAATATTGACTTAT GCGTTATCTATGTTGATGAAGAGTATTGGAATCTTAAATTGTCAGGTGAA TCCCTTTTGAGCAATGCCTTCAAAAATCCTAAATTGAATACAGCAGGGCA GAGAAGGGGATGGCTCAAAGTGATATCACAAAATCGACTTGTATCCTATG TTGATAATGATTGTTTGTGTTTGAAAATTAAAGTGaactataaataaaaa taatgttttttgtATCACAATTTCGAAACCATACTCATACtttttattgg tcagcctaagctgagcattcaaataggtaaaattttcttccatcatcagc atcataagacggcaaaaaaaaaatccgat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052611TCONS_00052611Clytia hemisphaericatranscript
TCONS_00052612TCONS_00052612Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052611-proteinTCONS_00052611-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:678564..682992 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.51 43.68 37.99 36.65 1.5 1.81 5.1 5.56 5.97 4.01 4.09 4.05 3.01 2.06 8.67 8.68 9.28 8.99 2.54 3.75 5.09 4.68 23.82 21.3 6.4 8.1 6.08 3.86 13.36 16.05