XLOC_033106 (gene) - C. hemisphaerica

Overview
NameXLOC_033106
Unique NameXLOC_033106
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_213:733031..741427-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033106 ID=XLOC_033106|Name=XLOC_033106|organism=Clytia hemisphaerica|type=gene|length=8397bp|location=Sequence derived from alignment at scaffold_213:733031..741427- (Clytia hemisphaerica)
CACATAAATTCGGCTTGAAAGCCGTGGTTACTTATTCCCCGATTCGCTAT
GTACAAGATGGTTAGAGTGCGTTACCCATTCGGACGCGTGAAGTTACACA
GCCATCTTGAAAGTAAGTTTGATCTCTCCATTTTACCTTTATACCAAAGG
AACTCGTCAGAAAAATGGGAGAACAAGCTGAAATCGAATCAGTAGAAGTT
ATTGAAGATGAAGTTCCAGTTGAAGATGAAGGTAAGGTATTTCTATACAG
TCTGACAGAAAAATTCTGTGGAATATTGTACTACCGTGAGATAGGGTAAC
TTGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATGAATGGCCTGGCT
GGTCATTAAAAGACAAAGTTAAATTAAAACAAAAATGGTAGAGTAGAGCT
GCAAGCTGNTGGCCTGTGCTGATAGGAGCCTGACTGGGGCGACGACAAAA
GTTGAACCTGGTTGAGCCCCCAAAAGGGACCCCCAAATGTTTCAGGCTGG
AAGCCATATATGTGACTTCCCAAGCGATTTGAAGTACATAAAAGTCTGAT
CGGTAAAAAGACCGTTCTTCTTTGGCCTCTACGCGACCAGTCTTTTTACC
ATTTGGGCTGCTTTGATATTGAAGAAGGCCGATGTGAGGCCGCNTGTTTC
ACGGTACTTGTCAATCAATTCACGCAATCATATGCTAATTTTTTCCTCAA
ATTCACGCATTCACGCAATGTTTTTTTGCAATTCATGCAATTGTTGTTCA
CACAATGCATTTTAATTCACACNGTTAGCCCCTAACATCGGCCCTTAGCT
TTGTTTTTCAATTTACTTACATTTTCAAGTACATTTGGAACAAAGAAAGA
TTTTTTCAGAAATCAAAAAGGGCAAAACAAAACAAAAAGATAAAAGGGAG
GGCGCTCAAAAGAATACGTNAAATTTTCACGCATTCATGCAAGTGAAAAG
CCCTCATCCATTCACGTAAACCAAATTCAAACCGCTGGTGGCCCCATCAA
TACCGTGAAGTCGGGTAGCTTGCATCAGTGGAGGGAAACTTGCATAGCCA
TCAAATGACTGACCAATCAAAGCAGCAAAATTTCAAAACAAATAAACTAA
ACAAATAACGCAGACATTTCGCTGAATGCTCAGAGCGCAACATCCTACCT
TATAAAGGAAGAAATTTTGGCGGAAAGAAAATTTGGCGGATTTGGCGGAT
TTGACTGAAATCCGCCAAATTAAGTTCCCGCCAAAAGTTCTTTTTTCCGC
CATCCGCCAAATTAAATTCCCGCCAAATTAAACATTTTGAAAATAAGATC
TCTTTTAAGGTGTTTTTGCTATTTTTTCGCTGTTTTGACGCCATCTTAAG
GTTAAATTTTTAAGCGACTGCCAAATTAAATTCCGGCCAAATTTAGTTTT
TTCGTCCATCCGCCAAATTAAATTCCCGTCAAAATTTCTTCCTTTAAGGT
ATTTTCCCTTTCCTATCTACCGTCAACTGCTCTAACTTGGGATGATTGGA
CAAAACATGGGATGCCAATTTGACCACAATTTCACCGAACCTCCAAAGTC
ATTTGATTTGAGTAAATGAACGGCGTTTTAAAAAATACACAATTTCTCTT
TCGCACCTACTGTAGTAGGCTTTTAAATTGTAATATGAAAAAAATCCATA
GTGGAACATACGCGAATGTCTGGAACGAAGAAGACGGGTCTTTAAATTCT
CCAATCGGTGTCTGGTCATTTTGAATGAAAACTGTTAGGCTTCACTTTAC
CTTCTTTACCTTTACCTTCTTTCTTTTGGCTTTCTGAGACTTAGTAATAG
TTTCTCATTTCTGACTGAGACTTCATACCTATCAATCACTTGTCCGACTG
TGTTTGATCAATTTCACCCAATCTTATTATGGCACCGAGTGGGATTCGAA
CCAACGCCAAAGAAATGTCATCGTATTTGGAAACCAAGGTTTTAACCGTT
CAGCCATTATTGCACAGCAAAATCCGCAATTCGTAACAAATAAACGTAAC
TGACAAATCTTTATATGTAGGTGAAGCTTCCAACCCTACTCGTGCCATCT
TTATCAGCTAAACTTGCCAGAGCAAATGGTATTATATCTAAGCTTAGTCA
CTACGTTTCGACAAAAACCTTAGTTAACATTTATTATGCTCTTTTTCATT
TTCATCTTCAATATGGTTGCCAATTCTGGGGTCTTACTGACAATACCACC
TCCAAGAAGCCTATATTTAGCCTTACGTCTTATTACTTTTAACAACTCTC
GATGCCCTTCTTCTCCCCTCTTTTCTGACCTCAAAGTTCTCAAATTTTTG
ACCTTGTCAAATGCCTTAAAATATATCTTTTGTCCACAGATTCCTAAATA
ACAAATTACCCTTCCACCTTCTGGAGTTTTTTAAAACTTCATTCAGCTCG
ACGATGAAGACGAAAACACTCAAAGCACGTTTGAAACTACTTATTGTTCC
CTCCTACAACACCATTACCTTTGGGAACAAATCTTTCTTTAAGTTTTGCA
TAACACAGCATCCAGTGATCTTACCCAAATATTACCCTGAGCTCATCTGA
TTTCAGTTTTGTTAGGTCTCTGCCCTTACTCACTGTCTTTGGAGATACTG
AGTTGGGCTTCCCAACTAAGAAAGGTTAGCAAACTTTCTTTTAATTTCTT
TTCCCAACTAAGAAAGTTAGCAAACTTTCTTTTAATTTCTTTTTCATTAG
GTAAAAAAATTCTTAAAAATAAAAACATTTTTAAATAATTTACAAAGTGT
TATAAACGCAATCTGTACTTAGGTGGCCGCATCTTTTTGATTAGCTAGAC
TAAGGCGGTCTCCTTCCATATATTTTTTATGCATTATCATCACTTGTATC
CTTTTTGTAGTGTTAGATGGTAAATGAATACTTACTTACTTACTGCCCCT
AAAAAAGCTGCTATGCAGCCCTAGGTTTAGTCACTAGGTACGGGTGCCCC
TAAGAGCACTATGTTATGACTCTCTAGCTCCAACCAGCTACAACCCTAAC
TGGTCTTGACGGACCCAATAGACCTTTTCGCCTTTCCATCCGCTATCTTG
AATTGTATGAAAAAATACAGGAACGAAAAAGCCGTGGTTGGATTTAGTTG
GAAAATATGCAAAACATTAAAAAAAAACAAAGCATCTTAAAAAGAAATAT
TATAAACATTAGAACAACAAAAGATGGAATTTCTTAATCTAAAAAGAAAT
ATTTACAGAACAATAAAAGTCTTTTAGAAATTGGTTCTTAAAGACAAAGC
ATGTTCTGTTTTCGTGCCAGTAAAAAATTCCACAAAGTTGGAGTACACAC
ATCAACTTTCAAAACACACAAAATGAAAGCAGTAATTATGACCAGGGCTC
AAAATAACGGTCGGACATCGGACATTGTCCGACCCAATTGCTGAAATGTC
CGACCCAAATCGATTCTAGTCGGACATCATGTCCGACCCAATTACTTTCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAGTAAAAATCATGGGCTTCTGACCATTAATT
GGCATTTGTTTAGCTTCTTCGTGATCAATGTAAAATTCTATCAGAAGCTT
GTATTATACTTGAAATATACCTCACATAAAAATCAATCGGACATGTCCGA
CTCATTTTACTTTAAAAGCCTTAGGACATGTCCGACCCAAATCAATTTTT
GATCGGACAATGTGTCCGACCACCTAAATATCGTTATTTCGAGCCCTGAT
GACGTTACACATTCTTTTCCGTACAAGAAAATATTAAAACCCTCGTTTTT
GCAAAAAGGTCTATATCCCCTGAATCACTGAATGACGGATGGGAAAAATT
ATCAAGGAAAAAAATCGCTCATCGCGCTCTGAGCATTAAGCGAAATTTGC
CCGCAGCTCTTCTCTACCATTTTGTTTTAATTTAACTTTGTATTTTAATG
ACCAGACAGGTCATTCATTTGAGCAAGTTTCCCTCCACTGATTCAAGTTA
CCCGACTTCACGGTAGTTGTTTAAGACCAGACTCTCCCACTCAATACAAT
TGATAACTTTTTCAAAATGATGACTAATTCATAACCAGTCAGTTGATTGA
TCGGATATTCAATTGATTGATTCCAATAATCGAACCTATTCTAAAATCTT
GAGCACTGTATCCCTTAGGATGTCAATCCAACGAATAGAACACCAAATCA
ATATTGAACACAATTGAATGTAGTCAAATATCATATCACCCAGGATTTGC
CGTTCAATTGCTTCAATTACGTTTTTTATTCTATACGATTATGTTCAATT
AAGTTCAATTGATTTGATTGCATTTGCTAGCATTAAAGGGACATAACAGT
ACTTGCGAAATTTGTAAACAAACTGTATGCAGCAGATACAAAATCAAAAC
AAATATCACATTTCAAAATAAAAAAATCAAACCAAATATGGCTAATTTTG
ATTGTTTAATTGTTTTACAAGTTTGTTTTGGACACGTGATTTTAATTGTT
CTCTTTAATGACACGTGGTTCGCGCAATGTTTACATTTTACTACTTTAAT
GTCCCTTTAATCGCCCTCGCATTGTGCTGTACTTTTGTGCTTGCTCTTAT
CTGATATTGTTCTCAATCAAACGTAATTCAAACGCAGTCGAACACAATCG
AATATTAGATTACCCAGGAATCGGCCATTTGATTGAGATTTACTTGAGTT
CCAGTGAGTTCGACAATCAAATCGCAATTATTCGATTGCATTTGATTACA
TTCAATTAGTTCGATTGCGATTTTTGTTTGAACTTGTTCGATTGACACTG
TCAGGCTTTATCGATTGAATCATGGATTGGCTATTGATGATTGTATCAAT
CATTTTAGAGTCAATTAGCCTGGGTATCCAGACTCAAAATTTTAAAAATA
CAAAAATTACCTCAACATACAAAGTTCTAAAATTATAGATTCTGGTGCAC
CTAGAACAGCCTGATATCGTAACTTGGGACTATCGACAAATCAAAACATA
TGGGACTGCCACCATTTCACCGAACCTCCAAAGTCATTAATTAACATAAC
CGCAAATCATAGATAGCAAATAATGTGAATACACTAATCTCACCAGGTAG
GCTTTCACACCGCAAAAGAAACAAATCTTTGCACTTTATGGGACGATTTA
GACTAATTCTTGAATAGACCTTTTCCCCTTTCCATCTGCCATACAGAACC
CCTTTTCATCTGCCATGTTGAATTTTATGCAAAAGTTATGGTGGCAGAAT
TACCTTGGTGAGATCTCATTGAAAAATATGCTAAACCTATTCAAAAAGAA
AGTATTAATATTAAACAGTTTTTGCCTGTAGAAATTTTTGATGAATCTTT
GTGTACTGTACTTAAGCATAACTTTATTATTAAATTGATTAATCCTCCTG
AATATTTTCAACGTGAAGTTCAAGCACGGAAGCATTTTCATTTTATTTGA
ATAATAATGAATAATAAACATTTTATTCAAATAAAATGAAAACGCTTCTG
TGCTTGAACTTCACTTTGAAACAATAACTTTACATTTGATCATGCTTTTT
GCATGTGGTTTTTTGCACATGATATGCTATATTATGTAATTTTATACATG
AAAAATTACAGATTACAAGGAAAGTAAAGAACGGCTCTGCAGTGTGAGGC
TGTCAGTCTGGAAACCTCAAAAATGGTCTGATTTGGTTGAAATTGGTAAT
TTTTTTTCAATTTTACTATAGGGCCTATGAATAATTTTAAAACACTGAAA
TTGAGCCCAGTGCATGTTAGCACCTTCGACAGGGGGCCGTCCACATAGTA
TGTACACACAAGGGGGAGGGGGGTCTTCTCAAGAGCATATACTTGCGTAC
AGGGGGATGGAGGGGAATTTTTTCATAGCCCTTTTTTGCTTTTCTGTTTT
TTTGTCAACTTTTACGCTTGTTATACGCATCAAGTTTCATGCATTAAATA
AAGGTCCGAACCAAACGATTTGAATTCGAAATTTTCTTCAACCAAGGGGG
AATGAACATTTTAGTGCGTACGTACTCTGGGGACTGCCCTGAGGGTAAAA
AATGTTTTCCATAAAAAAAGAATCATTGAAAAACCTTTTTCATTTGCTGA
ATTATTCAGCCAAAAGTTTTCTCTTTTTACAGCTCTGCGATGGTAAAAGA
CCCCCTTTAGAAGTGCAAGTGCGCACTCCATGCTGTAAAATGATAGTGAA
AAAATGATGAAAAAAGCTATTTTGAAATAATTGCATGCTTTGCATTGCCT
AAAAATGCCATTTTTCCTTACTTTTGCCTTTAAATTAACTCTTCACTAAA
TCAAAATTCATTTCATTTTATTTTTCTTTCCTTTAGTTTCAGTGGAAGCT
GAGGTAGAAGAGGAAGAACCTGCAGCCGAGGAAGAACCTGCAGCCGAGGA
AGGTGGTGACGAAGGTGGTGATGATGAGGATGGAGACGACGAGGATGACG
AGGACGATGATGATGAGGACGACGAAGATGAAGAAGATCCGGAAGATCCA
TATGAAACCAGCCGTACCAGATGTGCTGAAACCAAAGAATGTCGAGATCT
TATGACACTCTTTGAACAATGTGAAGAACGTGTTAATTCTAAATCACAAA
CTGAGGAAAACTGTACTCAAGAAATATTAGACTATTTTCATTGTCAAGAC
CATTGCGCTTCCAAGGGTGTATTTTCAAAACTTAAATAGAACAATTTTTA
GTGGAATGTAGAGTTTNCATTTTCATTTTATTTGAATAATAATGAATAAT
AAACATTTTATTCAAATAAAATGAAAACGCTTCTGTGCTTGAACTTCACT
TTGAAACAATAACTTTACATTTGATCATGCTTTTTGCATGTGGTTTTTTG
CACATGATATGCTATATTATGTAATTTTATACATGAAAAATTACAGATTA
CAAGGAAAGTAAAGAACGGCTCTGCAGTGTGAGGCTGTCAGTCTGGAAAC
CTCAAAAATGGTCTGATTTGGTTGAAATTGGTAATTTTTTATCAATTTTA
CTATAGGGCCTATGAATAATTTTAAAACACTGAAATTGAGCCCAGTGCAT
GTTAGCACCTTCGACAGGGGGCCGTCCACATAGTATGTACACACAAGGGG
GAGGGGGGTCTTCTCAAGAGCATATACTTGCGTACAGGGGGATGGAGGGG
AATTTTTTCATAGCCCTTTTTTGCTTTTCTGTTTTTTTGTCAACTTTTAC
GCTTGTTATACGCATCAAGTTTCATGCATTAAATAAAGGTCCGAACCAAA
CGATTTGAATTCGAAATTTTCTTCAACCAAGGGGGAATGAACATTTTAGT
GCGTACGTACTCTGGGGACTGCCCTGAGGGTAAAAAATGTTTTCCATAAA
AAAAGAATCATTGAAAAACCTTTTTCATTTGCTGAATTATTCAGCCAAAA
GTTTTCTCTTTTTACAGCTCTGCGATGGTAAAAGACCCCCTTTAGAAGTG
CAAGTGCGCACTCCATGCTGTAAAATGATAGTGAAAAAATGATGAAAAAA
GCTATTTTGAAATAATTGCATGCTTTGCATTGCCTAAAAATGCCATTTTT
CCTTACTTTTGCCTTTAAATTAACTCTTCACTAAATCAAAATTCATTTCA
TTTTATTTTTCTTTCCTTTAGTTTCAGTGGAAGCTGAGGTAGAAGAGGAA
GAACCTGCAGCCGAGGAAGAACCTGCAGCCGAGGAAGGTGGTGACGAAGG
TGGTGATGATGAGGATGGAGACGACGAGGATGACGAGGACGATGATGATG
AGGACGACGAAGATGAAGAAGATCCGGAAGATCCATATGAAACCAGCCGT
ACCAGATGTGCTGAAACCAAAGAATGTCGAGATCTTATGACACTCTTTGA
ACAATGTGAAGAACGTGTTAATTCTAAATCACAAACTGAGGAAAACTGTA
CTCAAGAAATATTAGACTATTTTCATTGTCAAGACCATTGCGCTTCCAAG
GGTGTATTTTCAAAACTTAAATAGAACAATTTTTAGTGGAATGTAGAGTT
TCAAAATAATGTATTATATTCTCTCAATGAAAATGTTGTTAAATTTGAAA
ATTGCTTTTACAACGTGCAAACAGACCTCAATTTATATTTTTTAAATTAT
TAAAAATTTCACTCAGTTTTCATTCTGTACAAGATTTTATTTTTTGAATT
TAATGTGTATTGAGAGTCTTAACAGTTTTATGCAACAAAGATACCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052367TCONS_00052367Clytia hemisphaericatranscript
TCONS_00052366TCONS_00052366Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052366-proteinTCONS_00052366-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:733031..741427 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
424.89	447.12	531.35	535.38	469.07	380.45	620.48	698.5	633.44	524.29	731.31	728.88	572.68	604.59	540.35	537.07	776.53	799.45	366.6	387.12	729.99	747.67	492.14	500.55	832.25	831.83	631.81	708.52	442.99	410.96