XLOC_032647 (gene) - C. hemisphaerica

Overview
NameXLOC_032647
Unique NameXLOC_032647
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_202:739621..749858+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032647 ID=XLOC_032647|Name=XLOC_032647|organism=Clytia hemisphaerica|type=gene|length=10238bp|location=Sequence derived from alignment at scaffold_202:739621..749858+ (Clytia hemisphaerica)
TttcattctcaaaaatttagatATTGGTCAAGTATTAAACTTCTATGTTA CTACATGTTCTTTTTagtcaattaaataaaaactaagAACTTCAAGATGC CTCGTTACGATGAAGGAAGATCTGAAGGAAGATCTGTTCTTCCAACCAAA AGCATGATGGGTGGAAGACTTTACGTTGGCAAACTTCCCAGAGACATCAG AGAGCGTGATGTAGAAAAAGAGTTTCGCAGATACGGACGTGTCAAGGATA TTTCCATGAAAGGAAACTACTGTTTTATcgtaagtttttgttttttctca agTTTTCATAGCCTTGCCAGTACGCCTACCCATTTCAATCATAGTTGTCA GAGGGAAGGGTCAAGCCTTCCCTTCAATAAAGGTTGTAATCCTTATTNCC GCCTACCCATTTCAATCATAGTTATTAGAGGGAAGGGTCAAGCCTTCCCT TCAATAAAGGTTGTAATCCTTATTGCAAAAAACTAACTTTGTTTGATCAG AcacaagaatattttcagcagAATATGTAATATTTTAAGCATGTAATATT TTGGACATCTATCATTTTTTTCTAGCAATACGAAAGCTCGAGGGATGCAT CAGATGCTGTCCACGATTTACACGGTCGCATGCTTTGGGGTGAAAGGTGT ATATATTTTTCCTACTTTGTGCTAtaaatttaaacatttttaaatttgga CTTTTTTCAATGGATATCCTGGAATATCGTTGCTTATAATATGCAGGTTT TAGGTGGTCCCTATTAAATGCacatttattgtttttaaatattttcaaaa tcagcTTAAAACAATGTCTATTATGTGTTATAGAATGTCAGTGGAGCATG CACGAACACCGAAAGAGTTTGGATATAGAAGAGGTAGTGGTGGTGGTGGA AGTCGATACCATGATAGAGGTTACAGAAGAGATTCATACAGGTTGGTAAC CCCTTGTATTGAATGAATGTAAGAAAAAAGTTGTATAGAAGGTTGTTTGA TGTATTCCAATCAcatcaaatatttttacccAAAATCCAACTAGATGGTT TTAAGGTATTAGTGTTttgcttttatattttttgtaaatgATGGGTGGCA CAACAATCAGAAGTTAGTTTATTGTAAAATAATTTGCaatttgcgaaatt taattcccgcaaaaaaatcaaaagagctttcaatttgcaaaatttttaat ttttttaaacttattaataaaaaatgttcaaatacTCTCCTTTTCTGAAG TTTTATAGCAAGGGACTTTAGTAACAATCATTAAAGCAAATACTTCTACT CTCCACATTATAAggaaaattaggaaaattttttaatttatcctCACGAC TCacgaaattcaattcaattacaAACACCTTCGCAATCAAATGGCTTGAC TTGGCTTGAAATTTCCTTTTGGCAAAAAATTCTGACATTTAAGTATACCG AATTTGAAAGGATCCCTCTTTCATACTCCTGAACAGTCCcgaaatctcaa aattattaaaatttcaaaataatgaagATGAAATTCATAAGCAACATGGG ATATATATATGACCTGCTATGACATGGAATCGCCGAAACTCAGAAAACta aaaggatatttttttccgcGAGGACGAGACTGATTTTCTTTAATTTGGCT GCAAAGCAAATCTTGCGTTGTAAAATTTACGTCATATGTACTGCAAAATA TATTTCCTTGGTGGAATTGTCTTTTATTGTATGGCCCTCTCTAATTGACA CCGTAAACTTTTATTCCTTCAGAGACTCATACCACTCACGTAGAAGATCG CCTTTGCGCAGTGACTATCGAATTCTGGTCAAGAACCTATCAACTAGATG TGATTTCCATGTAAGTTACGATTTAGCTCCATCCTTTAGATTTGTCGCCG ACCTCAAATTTAGTGTCCATGATGGCTTACTTCATGTTTGAGGGCCTTTT ACGAGTGCTAATCTCAATAAAGGTAAGAAAGACAGAAAGAATGTCAGTTC TATTAGACACTGATCTCAATGTTGAATCTTTTTCAAAGTATTGCGAATTT ACACCCTTTCtttctttattgaaagaaaattctCTCTACCAAATGGACCC TAtaattagcaaaaataggttgatatttcaatatttgAGAGAAAGCAGTG TAGCCatcaatcgaaatttttttgtgTATTTCTTCTTTACAGCTCGTTTT GTCGTGATCAGGGAGATTTTACGACTATTTCTCCCCGTATTTACGTAAAT TTTACGAGCTGTCTTACGTTACGTTATGTTGTGTCGCTCGGTCATTCGGT CCTGAAACTTGGATTGCTATTCGTAACCATTGCCACGCGTAAATTCGTTA CGAAAGAAAATGCTCGAAAACGGAATAAGCTATCGTCACTCGCAATCGCG TTATCCTTATGCTTTGTTTACGAGCAAGCGTACACTGACGTTATTTTCGC GTTATTTCCACGATACGTATTTACGAAATTTACaagttttcgaaatttta cactGACGTACACAAGACGATAAAAAAGTCTAGATATTACGGCAACACTA CACTTGGCTATGGAACAGGTAAGATATTGTTctggaaaatgggaaaaaaa tctTTCGCCCCGCTTTTTGTAGAGCTGGGTTAGTGCCCACTGAATACCCT TGTTGAATTCTGGGCGTACGCTCTCCAGCTTTTTTCCCCTCGAGGATATT GATAAAAGAGCAACtttaattttcatcaaatacattttgaaatagacaaa ttatcgtggcttggattgAACTCAGACGATGTTGAGCGAATTTGTTGTAT TTACGGAGGACATTATCATTGGTAGTTATTGTCGGAGCAGACGAATTGAT CAATTAATTCGACATAATCGACCGTTCTTTTATCTGGTGAATGAGCTGCA TTTGGACATGTTTTTCACTTCAAGCCTTCGGTTCGATTGATCTTTCATCC CGACAGTTTTGTTCACGATTGACAACTTATATAATCAATATATTCGGCGC GGAAGAAAGATTGATATGACAAGATGACGAAAAAGACGAGATGCTTGATT TTTGCATCCCTTTTTAGTAGATGGTGCGATCGATCAAAACTATTATATGG AAAATCCGCAGTCTTCGTAAACGGTAGTTCGCACATAATAACACTTGCAA TGACTCGAAAAGACTCGACGAACATCCATCGGTGACACTTTTTCATACAC TTCAATTACAAATCATTATGCATCTACTCGAGATGTTTTTTGTCATCTAC AGGAAAGGATTGATACATTTGAAATGTAATTGTCATGTTGAACATTGCGC TGGTCTTCAGTTTCAATCAATGTGCAATCAGCAACATACCATCACTAACC GGATAACGACACAATCAACAATATTTGAACGagtttaaaagttttctcat ATGGATATGAGCTATATCCTCTCTTACCTTTATTCTCGCTTAAATTTTAT TCCTATGTTCTTTCTTTTCGTCTTAGGACTTGAAAGAAGTCTTTGGAAAA GCTGGATCCGTATTGTTCGCAGACGCACACAAGAAGCGAGTCGGAGAAGG GTAAGGCTGATatcaaaattacatttcttcacTGTTCTTTGCTACCTAAA CATTATCAGAACTCTTGAAAATGTTTAGTAATATTTAGTAGATCCACTGA GATGTTTTCACAAACTCGGCAGGCGTTTTTCAACAACGATTTTGAATCTG TTCTCAAATGTTttggctaaaatattaaaaattaacTGATCTTGACTTCT CAGAAGCCTGTTTCAAATAGAGTCGATATGAAATAATTGTATTTTCAGAA GGTCAAACCAGAAGTCTCACCTTTTTGTTATAATGGTCAACTTCTCTGGA CAGCTCAGGTAGAAATGGCGAAagatgaaaattatgaaaaattctttaaa catTGACGTTTGCACACTTTTCTTACAGTCTGGTCGAATTCGACTCCAGA AAGGATATGGAACgagctctcaaaaaattgaaCGGACTTGAAATTAATGG AAAACCAATTCAACTGGAAATCGTAAGTCTATTTTTACTCTCGTAAATTG TCCCCATGGAATAAATCTATTTAAGCTGGGagaaagtttatttttgacaA ATGTAATGTAATGGCTTTTTAACCAGACATGAGAATAAAAGCTCAAACTT GTTGTTATAATCAACGAATTTTCTCTCGTATACTGTACATACAGTATCTC TCTTTTCATTCAAATCTCATAATCGAATGcgatatatatatatacaccGA CAAGTTTCGAAAAAATTGCTTCGTGAATCTTTAAATCGTACGCTAGATTT TGTacaaaatttcttcaatttcttaaCATTTAGGATGAAGTGAAACGCAG ATCACGATCTCGTAGTCGTAGTCGCAACAGAAGTCGTTCTCGATCACGAT CAAGAACCAGATCCAGAAGTCGATCGCGCAGTCGCTCAAGATCCCGCTCG CGTTCAAGATCACGTTCGCGCGGTCGCTCACACAGCCGATCAAAGAGTAG ATCAAAGTCAAGATCCAAGTCTAGGTCGAGATCGAAATCAAGATCTAAGN AGATCAAAGTCAAGATCCAAATCTAGGTCGAGATCGAAATCAAGATCTAA GTCTCGATCACCAAGGTACTTTTATTCCTCACTCTGTAGGAAAATCTGGG CGCTAGTTCTCATTCTGCTAGATAGTCATCGGATCCAACTGCTATTTTCT GCACAATCAAATGGCGACTTTCACTCCTCTCCGTTGGAAAATTGACACGT TCTTTTTAGAGATCCTtaaaaatatgcgccgtatttttgacggcggattg aatctagcgattccCTTGTTTTCTAGTGatgtctttttcaaaatttaggt gtaaattttagtttcaatctgctGTGATTTGTGTAAAAACAAGGCGGACC GcgctaggccgcgcaactttggtaggatttggtaGGCTTCAATCCAActa tagcccttcgggcttatacttcaatGGGTGGGTCACTAATACGCCTGTCA ACCTTTACGTTCAAAGCTGTATAGAAGGGGACTAGGTACGAGTTTACTAG GGTAGAATGGACGGTGTCAGATgtctgaagtcgttgcattgataAGCTCA CAGATATAAGTATGTAAATGTTAagaccggtctccacttgcgcgcgcttc gatcacaccttttggcttcaatcctttttgcttggaaagaAGATTACGTC TTAAAATGTAGCGTGCGCTCGAAAAAAAGAATACATTTTAACTTTTATCa gccgttacgtcagatcgcgccaatggagttgcttcatttttcttttgacc aatagcgtggaagctttgctcgaaaaagtgcgatcaaagcgcgcgcaagt ggagaccggcctttagtcGAGCCTGGTAAAGGGCATCCAATCCAATCGTT ACTTTAGAATTGATAGCTGTACGAAATATCGGTTGAAATATACTCCCTCT TTATTCTAGGCGTTCTCGTTCACGCTCGAAATCTCGTTCGGCCGAACGTA AATCGGCGGGCGGTGAAGAAAAGAAGGAGGTGAAGAAAGAGCAAAGCGAC GATGAGATGTTTGATGAAGCGGAACGATCTGTTAAACGAAATAAGGTATA TTTCCTTCTCCATTGNAAAAGAAGGAGGTGAAGAAAGAGCAAAGCGACGA TGAGATGTTTGATGAAGCGGAACGATCTGTTAAACGAAATAAGGTATATT TCCTTCTCCATTGTTGACTACATATCTTAAGTCCGACTCAAAATTTATTG AACACTTtactttttaaagaaatttctcAGCACCTATTTATGctatgtca aaaaatttttccaatgtgGATTGGCTCAGTCGACATAGCAGTTGCACAGT GATACGTCCTCCGTTTTTAGTTCGCCATCAAACTGAGGTGTAAGTCCTTG ATAATgatattgttaaaaaaatatacaccGCTTATTTCCTACAAAATTGC TTGAATAATATTCCATCCTCCATCCACTACTGCTCCaagtagcgagcacc tcaccaatTTTTCATCTCGTTAATAGCATAGAAAAAGCGCGGATGACGTC TAATATAAGCTACGTTAGAAGCTCCTTTTCATTACATTTCAGGAGCGACA GAAGTATTTACCTATAATATTTTAAACGCAAATAAAATTGTTATCGTTAC ATTTCAGGAGCGACGGAAGGAGAAGGGTGACGCATCGGAGAGTGAGGGTG AAGGAGGCGAAAAAGCGAAGAAGTCTGAAGGTGGCGATGACGATGAAGAA ATTGTGGAAGAAATTATTGAGGAAGAAGTCGAAGTTGAAGAAGAAGTCGA GGAGAGTGAAGGTAAGAATAAGTTGTTCTTACGGTGTTCTTTTAAGTTGT TTCTAagcttgtttttcttttgatattgttCTTGAAAGAAAACCAGGAGa gtgaaatttaaaaagaatttgtgGAGTTCTTCTAAAATTAAAATGGCTTG AACTGTAGaagaaaagttaaagaaaagttAAAGTAAGAGGTTATAATTTA GGATaataaaagttttcttttcgtaTTTGACTCTGGCTGTCTTCTTAGGT TGTTTTATAGTTTTGAGTAGCAGTAAAAGAATTTGAGAGAATCACGATTC GGGGCTAGGGGAGGTTATCTATGTTATACACTTCTTGTTAGACAAATCAT ATTTTAATTCTACCTAAAAACCGAATAGGACTTTTCAAGGCCAACTAACC TTAGAACAGCTTTATTATCAGAATTTGAGGTGAATTTTGTTCATAGTGTT TATCTTCAGAATAGGAAGAGAGAAtagtttcaaaatattttgatgttgcA TGCATGTACGTTTAGAAGAAGAACAGATTGTCCAAGAAATGAGTGAAATC AAAGTTGGAGAAGAACAAACTAAAACAAGAAAGACAGGTACTGAAGGTAA GTAATAAGTGATCATATATAATACACCCGAATGGATTTATTTTATCATCA GCTGCTCTTATGTGCTCATGGTTTTCAGGTTGAAATGTTTTCTTAAGATT TTTTCTCACTTCGCTANAAGAAAAGGTAAAGTAAGAGGTTATAATTtaga ataataaaagttttcttttcgtaTTTGACTCTGGCTGTCTTCTTAGGTTG TTTTATAGTTTTGAGTAGCAGTAAAAGAATTTGAGAGAATCACGATTCGG GGCTAGGGGAGGTTATCTATATTATACACTTCTTGTTAGACAAATCATAT TTTAATTCTACCTAAAAACCGAATAGTACTTTCCAAGGCCAACTAACCTT AGAACAGCTTTATTATCAGAATTTGAGGTGAATTTTGTTCATAGTGTTTA TCTTCAGAATAGGAAGAGAGAAtagtttcaaaatattttgatgttgcATG CATGTACGTTTAGAAGAAGAACAGATTGTCCAAGAAATGAGTGAAATCAA AGTTGGAGAAGAACAAACTAAAACAAGAAAGACAGGTACTGAAGGTAAGT AATAAGTGATCATATATAATACACCCGAATGGATTTATTTTATCATCAAC TGCTCTTATGTGCTCATGGTTTTCAGGTTGAAATGTTTTCTTAAGATTTT TTCTCACTTCGCTACTTTGTTGCATTTAGGGGCCTGAAATCATAAACTTc tttacaattttgaaaattccagcCTCGAAGTGCTATTAACTCTTTAGCCT CTCTTAAAATTAGTTCTTAAAACACAAGATTAGTGATATACGGAAATAAA AGTAATTTGAGGACAGGAATAAGGTGTTCTTTGGttctaaagtaattttt taggatactgtattacttcgaataaacgccccttcttttaaacgctcCCG TCGAATAAAggcccctcctaaaatccaaaCAATTTAATAACCCCCCGGGT CATTTCAtccgaagtaatacggtatataAGCTCAAACATGGACTGACGTC TGTATTTTGAACAATAGCCTGCACAAAATAAGATCTGCATGAAGGAAATA AAAACTTAATCTAGGAACGATAGTCAGGGTAGTTTTTCTCTATGGAACAA GGTAGTTTTTATTACGTTTNCGATAGTCAGGGTAGTTTGTCTCTATGAAA CAAGGTAGTTTTTATTACGTTTTTAGATTCGCGATGCATTATTCTGTAGA TTGAAGTAAGCGTTGTCAATTAAGTTTTTCCGAGGTGCTTTTTTTTGCAT AGTTATACTAACTATTAGGTTATACTTTCTTTGCAGTCCTGTTTGTGTta cgtaaagtttttttctacGTGTTTTTTTAGGCAGggtcatggcgttctaa atttgtttaagggctctgaccatagtgaatttttaatatttgccacgtac aaaatataaatttctgctTGATGTAGTCCACAAAACTGGGGCATGttaaa cattttctgttagacaaattATCCTTGTTTTTGAGTCTGAAAActtaaga atcgcaatgaaaaaatttgatgaagaagaaaatgaagaattttgcgaaga agagtatttcaactttgaagagcttattttcggcgaagaaaaaatatttt gaaattttttttgcggtagatggtttatcttttaccgaactaaaaataga ttttcggaaaatttttctaaaagcttatttgtctcaaaatcttgaaaata ttgctttttgaccagtttttcaacccaatttttcatagataaacagccat aacttttaccgaactaatttagaaaatttttccgaaaaatttaaaacagt tcaattctttgcgaacagtttgaaaaaacttcgaaacaaaaaggttaatt acccattaaaacttagcactttttataaaagaaggtaatgcaacatatta ttaacgtctttttaaagttcatagcgtcatttttgtaactaaattcttaa ttactcttaagggatttgattaaaaagctatttatataggcaattctttg ttaaaagtgttaaagaacctaaaacataccTTTTATGTTCAAAcactaaa atctattttttgactatggtcagagcccttaagataCAAATAGCCTGAAT GAAAATTTGTCTAGCGAACGCTTTTccatgtttattttttattatttttt ttttacactttcatACTGAAACAGATTGTGAATTCTCCTTCGCCCAGCAG ATCAAGGTTCCGTCATCAAATGATAGTTTTTCCTATAAACATGCGTGTGA TCCCTTTGGTACCCTTGAATTTCTTGATTATTCAATCATctgaattgttt tcttttcttttttttctcaaaggaAACAAGAAAAATACAGAAGACGCTAA AGAAGAAAACGGGCAAATGGAAGTTGACGAAAATGGAGATGAGCGCTCAC AAGATGATGACGCGGCCGCCAGTCCAGACGCCGAAGCCGATGGTAAACGC ACACGCGGTCGAAAAGCAGCCGCCTCGTCCGCGCGTAGCACGCGAAGAAG TTCGAGGCGAGCATCGAAGCCAACGGAAGAGGAGGCGGATGAATGATGAG GAGAAGTACGCATGCGTcaatttatgttttttataatggaGAGTTTTCAT ATTGTTAACTTGATGCAATGAGAGAGTATTTTTAACGAAGATTTTAACTA AAACCGCAAACACCATCAAACAATAAACATCGGTATTGGACTTATACAGT ATTTTAAATCATACACGCGATTTGGAATGTCGCTCAACAAAAATTACATG TAAATTTATTGGTTTTTCATTGACCAACCTTTTAAaccaaaaaaaggtaa aattcaTGACCAGTTTTTTAAACCAGGAagttaaaatagaatggaagaat atagattctcatttttattttcaaaaaaggactttaacaaaaatattatt gagcaattttttttgccattcTAAAACCTCAGTGTGTaaatatgttttat ttttgccttgTAGTTTTAAACCTCTCTGACTTGAAATACGATGAATCTGG TACTGTTCTTCGAATACCATTGGTAATTTCGCTAGGAAGCTCTTCACTTT GACTTTGATTCAAAACCCTGTTGTACTTTTTCCACCGTAAGACTGAGTAG AAAACTAAATTGAACCTTAAGGTTACTTGATAGCAGAAATAAAAAATCCG CAAAAAAGGCCAATTTTATTACCAGGAAAATTATGTCTCACGGTATCCTT TTAGTACTATAAATAAGGGATTTTTTTGTGTATTTGATATTAACAATGTC AACATCTTGtacattttaaaagattttctttttattccaataaaaaatgt tttaatgacAGAAAAGAAAATATCTGGGAATCAACAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051514TCONS_00051514Clytia hemisphaericatranscript
TCONS_00051515TCONS_00051515Clytia hemisphaericatranscript
TCONS_00051516TCONS_00051516Clytia hemisphaericatranscript
TCONS_00051517TCONS_00051517Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051515-proteinTCONS_00051515-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:739621..749858 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SRSF4serine/arginine-rich splicing factor 4 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
63.37 56.43 181.15 193.76 343.02 270.99 230.85 247.63 113.23 127.07 127.86 110.85 143.24 152.5 117.51 130.99 160.02 146.17 39.6 38.04 103.7 104.24 74.97 76.21 175.4 202.44 65.73 60.19 53.54 54.53