XLOC_032252 (gene) - C. hemisphaerica

Overview
NameXLOC_032252
Unique NameXLOC_032252
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_19:665449..669911+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032252 ID=XLOC_032252|Name=XLOC_032252|organism=Clytia hemisphaerica|type=gene|length=4463bp|location=Sequence derived from alignment at scaffold_19:665449..669911+ (Clytia hemisphaerica)
AATGAAGAGAAAAATagcttatttttgaaaatttcctccttCAGCCGCGT
ATAAACACGGCCAAATAACCAGTCACATCATATCTCAATATAAATACGGC
TGAGATTATGCATGCATGTAATTTTTCTCTATCGTATCaataagttgaaa
atttttcttttccgtCTCATGATATTAACTAGCTGTGCTCACTGGTCGTG
TTATTGATAAGAAGTTTTATGCTATCAGTTTCTAATTGACTAATTTGTTA
CAAACTGACTGACACGGGAGAACTTTTACTTACTATTGACAAGAAGTTTG
GAAGTGTCGATTTCAAAGTTAATATATCATCATGCCAAAGTGTCCAAAAT
GCAATAAAGAAGTTTATTTCGGTAAGGCTAGTTAATTCTcgcttttctta
tttttcaagtCACCCTTGTAATATAGCTTGGTCTAGATTTTTTGGTTTTG
ACGAGTGGATATTATAATTCAAATTTAATCTCCAAGAACCCTCGTTTTCT
CTCCTACCTAGCATTACTTGGACTTTAGAACTAGAATGatccagaggaat
gtaaagagatggaaaaacagcttttctgattactcaaagttcaacgatca
cttctattgaaaattctatcgtaaaaacgttgattatNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNgctaggaaattctgagcaagaagatataggt
accttttcgtataagagaagtgtacccaaaatataagccctaaaagtttg
cgcataatcaggtttgaaacaaaagaattttgtcacaactcgctaattat
gcagattttttatagcgacgacaaaagaaacctatttactcaacataaac
tcccttaagggcaagagacctggtatatgacgagccgtttttccattgct
ttcaagaagctgtttttccatctctttacattcctctagcTTTGAAGGAA
GCTTTACAGACAAAAGTCATTATTTTTGCACACGGTCATGTACGTCCATT
CTTATTTGATGACGTCTCACTTGATATCAATGAATATCAATGATATGAGA
GGGGCTTCACTAAGGACAAACCACAAAGAGATATTTCACTCTAAAACCTC
TAGCGTGACATTACTTATAAACTGATAAGGATGCATACAGTACTGATAAA
CCATTAAGAAGCtgttcgaaaaaaagttttaaaggaCAAAAAGGACGCGG
TCAGgtcgcgcggtcaggtgcgtgccacttaactatttaattatccccct
aaactcgatccaatccttttttatcCATTGTCTAtaagtgcgaaaaaagg
actgggacggttttagttgAATAAAGCGGACacaaaaatgcccgcgcggc
aattggcggcttcGGTCGAAAAGTTTTATTAATTGTCTTGTTTTTGCAGC
AGTTTCTGTAACTCTACGATTAAAACGAATTATACCTCGTCGCATCATAA
TACAACGGGTACTTTAGAcgcaattaaaaaataaatctatCAAATAGCTG
TAGATAATCGCTTTACGGAAGCTTCTACCAATGTACTGTGTGCAAAAATA
TTTCCAATGATTGTCTTCATAATCCAAAGGAATATTGGTATAATTTTTAA
AGAGCACTAGCAGAACGAAGCATTTATATAATTTCAGATCCTAAACGTCG
AATGAAGAGAGTCTgtcacaaaaaatgttcttcaaaAACCTACACCCTGG
AAATTGGTGAAAATGACAAAATGTTGACCTCTTCAGAAATATGGCTTTCA
AAATTTATCGAATTTGTGACCTTAAGAAATTTCAGAGCCTGAGAAAATCA
CCCTGCCATAGCATACACTTTTTACCTATACCTGAACGACCTCCCTTCAC
TTTTCTACGTTTCTTTCTTTTGacttgtgatttgattggtatGGTCTCAT
CCACGATCAtcgcagtagcgtagacaggaggggcgcaaaatttgtgtagg
agagcgcACATTTTTATGGcacagtaattatctattcataatataaaaag
attaCTGTGACAttaaaatctgctctcctacacaaattttgcgccccccc
ccccttggctacgctactgcaTCGATGATTGTCATGGTCACTTTTGTATT
CATCCTCATTTGTCGTCACAGCGTAAATTCATACCCTTTGATACTTGCGG
TGTTCAAAAAGTCgtaaaaaattcttttattttcgaCTTTTCTTAAAATG
GGAGAAATTGTTCAGTTtatcaaaaaatggtaaaaatttgCAGTGTCTTC
ATGTCTCTGAGTAAGTCAGAATAAAAACTACTCAATTTAAACGAGtctaa
aacatatcaaaattctGAGGGCTGGTTAATCTGTAAATCTTATACAAACC
TACAGGTTTGTTATCTCCCCTtagtttgacatttttaaatGCCATAACAA
AAGGTATTTTTATCGTCTCAATATATTATTTAATAAAGTGGTCTTGAGAA
TGGGGCGTGTTATTTTTCCTAAAACAAAGCAGCACATAGGAATTTCAaga
gactcaaaaaaattgcctACCCAAGGGTAGGGAGGGAGAcactccctgga
ttgctccatttacctttaatctttcttttaattgctgagcattcagcaga
gaggcatcaagtaccatttttgtacTAAATATGAAGTCTTTGATATGACC
CGATCGGGGATTAGCAGATAGCCGTAGCCGATACGATACGATATTATCAG
TaaactaaaagtaaaaaaattcctGTAATGTACATGActtcaatttctta
atttttctcaCATTGTAgctgaaaaagtgacgtcacttGGTAAAGATTGG
CACAGACCATGCTTAAGATgtgaaaaatgcaataaaacaTTATCATCAGG
GGGCCACGCTGAGGTAAGACTTTGtgtttttaaatcgaaatattcagGTT
AAAACTGTACATGCCAAGGCTATTTTGTTCCTGGACCTCTGGAAGTCCTA
CCGGACTCTATAGTGTAACTTAGCAAGTTTATGTACGTGTGTTTTTCTGC
AACGGAGATGCTTCTGGTTTGACTAGGTAGATCCTCGATCATCTGAGGAT
GAAGGAAAAAAAGCACTTCTGCCGTCCTTGAATTTTTGGATCAAAACTCC
GGGTTACTCctaatcgcttcagtcactccaccgtccccaaaaaaggaaaa
atacataaacttgctactgtctaaatttgagaTGTACGTATTTTATTTGT
ATAAAATTTAGGGAAGAGACAATACTTTCAATAAAGGAATTCTGATTTTT
TATTGTACGATCTCGTAATAATTctcatatttttctttattatagCATGA
AGGAAAACCTTACTGCAACAAACCATGTTATTCGGCTCTTTTTGGGCCGG
GAGGCTTCGGACATGGTGGTGCCGAGTCACACAAATATTAGTATAACCAA
GGGTGTAGCCCACGAAaccttgtaaaaatattttatcttttatatCTTTT
ACCTAGTTTAAGCGCATTTTTGGGCTTTCTTAACCTTGTGTGTATTTAGC
AAGGCTTTCTTAACCTTGTGTGTATTNCATTTTTTGGGCTTTCTTAACCT
TGTGTGTATTTAGCAAGGCtcaaaaaacaattctaaatTAGCTTTTAAGC
Taataataatattaataataaaatttaagccaaatttggcaaaatttaaa
agaatctTTGATACATATATATGGTGTAATATTTATATTTAAAGTCATTG
ATTTATAtaacttgaaaaaataaattaaagctATAACTAAAAAAGTTTGA
TCTTGTActggatatatttttcaatatttcgtCTTTAGAGGTCAAAATAT
GCATATTTACTAGTTACTGAAAAAGGATCTTTTACCTACACTATACAAGG
TTTAAAAcaattt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050888TCONS_00050888Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:665449..669911 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.1	1.38	1.66	1	140.46	115.14	691.57	655.7	702.7	660.1	311.79	495.12	102.54	97.96	57.7	42.49	211.3	317.57	140.74	201.14	305.4	292.29	149.35	155.61	87.1	86.85	326.51	349.06	25.86	45.49