XLOC_032170 (gene) - C. hemisphaerica

Overview
NameXLOC_032170
Unique NameXLOC_032170
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_187:46038..55294+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032170 ID=XLOC_032170|Name=XLOC_032170|organism=Clytia hemisphaerica|type=gene|length=9257bp|location=Sequence derived from alignment at scaffold_187:46038..55294+ (Clytia hemisphaerica)
gtttagaatcaagcaattaataaataaaaaaagacatggTTGGACTTTTC
AACTAAAAGCATGGGGAGAGTATGAGCATCCTGCAGTAAAGTCACTTATG
TTGTGGTGTggattttctgtttttcttcgtCGTTTCGAGGTATGCTTCTT
TGActgtgtttttttgttgttgttttttttacaagGGACAACCACCTTTT
TTCAATTCTCTTGAGATAATAAGCTAACTACAACTTTGAGGAAACTTTAT
CTGTTGGTCATTTAAACATAGAGAGGACTTAACGATGAATTTCTGTCTTG
AAAGTGTCATTTGCACACTCTTCTTTTGTAAAGtgtaatcttttttattt
tcccgTTCCCGCTCCCAAATGGCTCGGAAGAATGGCCGAGGTTGTTAAAT
CTATAAAATAGAACAAAGCGCTATTGTTATGCAACTAAAACGTGTTCAAG
GTCTGCTCGTTGCTAGGCGCGTTCCCCCTTCGTTTTGAAAGAATGCGAAT
TTGTACGTTATGCTTTTTAAAAACTAAGAATAACATAAAAAGGATACACG
TAGTATCAAAGTGCAAAAACGAAAGTGCAGgggaaagtaataaaaatgga
aGACTCGCACGAAGATAAGTAAGTGGTATTTTTCGAgaaattttcgagaa
attttctAGAATTCAAGTAATTCTTcaattagtttgttcttatttacgTA
TCAAAGCAGAAAGTATTTTCAAACACCGTCTTTCTTTAGGGTTCGCATTA
ACAAGAACTCTATCAGGATGGCTGGCCTGGAATCCATTCGAAACTTTTTG
AAGATGAGTTATGAAGGTGTGGACTTTCAATTGGCTGGCAATGGTGGTTT
TGATTGCTACGATTACCTGACCATCCAATCACGTGTCACTGACACCTGTG
TCTTTGTAATGCTCGTTTTCATTTTGATCTTTCCAAAGATTATTCGATCA
TTGACATTACCTAAGGAATGGGAAATCGCAAAGTTCTGTCAGAAGCCCAC
CGCTCAAAGAATTTGTGGCTTTCGCAAATTTCTTCTGATCGCGCTTTCTA
TTATTTTGGGCATTGAGCTTGGTTACAAGATATCAGAACGCTCTTGGATT
TTCCTTCTCAACCCTTGTCACGTCATCACAATTTTACaggtgaaatttat
tttgtgtaCTAGACTTTTAGTAAGGGATCATTTGTTTTCATGCCAACCGG
TCATTTTTGCCAGCATTTCTATCAGAATATACAATTCAATAATGCAAACA
GCTTCAGGTTTTCTGATAGTGATAAACGATAACTTTTTTGTGATGATTTA
TTGCTCGATACTCACCACGAAGTCAAAATTCTTTCAGATTTACCTTCTAA
GTGCTGAACCGGGGAGGATGTGCACTGCAGTTTTCAGGTAAGTGCCGAAT
TTTTCATAGGTTTTGATATATTTAATACTGTATTGATGATTTGTGTCAGC
TTGCCAGGTCAAGCAATTTCAACTGACAAACAGGACCCCTCTGACGTTTT
TacttaaatattttttgctcaaattttgtatgGTGGCTCCTTTGACATAT
GAACTggatcatttttttccaaagtaCCCAACGTGTATTTTGCATACCGG
CTCATATTTCCCCTTTTGTTCGATTTGGCCCAAATTTCATATTCTATTTC
AAATTTGTGCCtgtgtttttttataacttGCTCCTTTCGGTAAAGCGCTC
TTAAAGCACCAGTTAGCCTTCAACATATAAGCaaactttttataaagaaa
ttacCAGGTTACTCTATTTTTACTGTTTATAGATTGCATATTCATTTGTT
ATTTGGGGCTTTTCTGGCATTTGTGTTTCCAGTACTCAACACACGTGTGG
TAAGTCAACATTTTCTAACAGTCAAAGTTTGCAACCTCTTATTGTGTGAA
CTTNGGTAAGTCAACATTTTCTAACAGTCAAAGTTTGCGACCTCTTATTG
TGTGAACTTTGATCGATGCTTTACAGGCCAAGGTTTACTGGCTTTCTCTG
TGGTTAATCCTCTTTATTAATTTACTAAATTACTtagtaaattatttttt
ttctcacgacCTTGTTTACAAAAAGCTAAGGTTTACTGGCCTTCTCTTAA
CCGCGGTGGTGGTATGCAAAAAATATACTCGAAAACCCTTTACGACTCGT
ATGTAGATTTTAGTAACGACCTCCCGTAGATCCTGCGTTTCAGAAAATCA
TTGAGAATTAGCCAAGGGAAAGTCAGTAAACCTTGGCATGGTGCTTGTCC
TGTATGTTCACAGGtactgatttttgcaacattCGTTCCAAGATACTACT
TTATGAATTGAGGAAACATTAAAGACATTTGACTGAATGCAAAAAATAAT
AGAACTTTGGAAACTTCCTTTAAAGTTGTTTACGAATAATTGTGCAAAAG
ATTCCAAATATGATAAAAATCAGGGGGGATCAGTACTAAAATCTAGGACA
TCGTGatgtttagtgacgtggtgaTATACCGTACcccaaaaaaacttaaa
aatccttttagtactatGGGGtactaaaattctaaaaaggtggTATTCGG
actaaaatttgagaattttttagtaaaaaaaattcagaaaagtggtattt
tagtacccatTTACCAAAATTTTTGGAGACATTCTCTTTGACACAGAGAC
ATTTTGACACCCAAGTTTGCTCTTCTCAGGATAAATTCTGTCTTCTTGGg
accatttttctcaaaagtgcTGATTTGTTGAAcataattttttgcaaaaa
ttgatACTTCAAACAACGATGTCTAATATATCAAGCAAAGATTAGAGAca
caaaaatatctgaaaaagattcaaaaaatgatgaaaatcacTAATTTTAG
TACAAGATGTACTAAGAAATTTCTTAACTTTCAGTCTGGATAccaccttt
ttggtattttagtgctCTGTGGTactaaaatgattttaaagttttttggg
gtataccaccacgtcactaaacatCGTGATGTCCTAGATTTTAGTACGAC
CCCCCTGTCACcacttttttggtattttagtgcgCTATGGTACTAAAAGG
ATTGTTAAGTTTTATGGGTTTACCACCCCTGCGTTTACGagtattgaaat
aaatttattttgtttacaCAACAAACTAGATCTTTatatattgacatttt
tgattttagcgtcACGGAGAGCAGATGATTTATTACTTACAACATTTCAT
GATAACATTGGTGGTTCCACCTTATCTGATACATACTGGAGGTATTTAAA
TTCGTTTAAATTCGTTGCCTTTTCACAACCACTTATAGGAGACCAAACAA
CTTATTTCATGAGGACGTTTGTTGTGTCATTCTCTCGTTCTTCCGTCTGT
TAAatctattctaaaaaaattgatagtcctatcttttttaaaaatttctc
ttGAGGGAAAAAGATAAATGAAAAGCAATACCTCGTTGGAAAGATCATTT
CGAGCGACTTGAtataaaatttttaagaatgtcctgaaattttaaagaca
ggttttggtcttgtagaagaaagcttcactttttcttcttcatttttcat
cttcttttttcatcttcattttcaaatattccaatgttctctaaaaagtg
gctgaatccgttttttttccggaaaatcTTATTCTCCTTAAAATACGTAT
TCGTTTAAGGGGAAAATCCCCTTTACCGTCTAAAGGGAAATCACTCTACA
ATATTTATTCAATCTTCTCCTATAATACGATACcgtaatgaccggttagt
gaggggtAACCGGTTGCAAGCTCGGTCGTTTTTTGACCTCGCGCAATATT
TCTCAGAACAGCCCTTTACCCAGAAAAAATAGCGAACAAAAGCGAAAaga
gatcaaaaattgttttaatttttgacttaaaaaatgaaaaacgagaCCTA
TGATGtgttcattttcttttgaaaaaactaaCGTCGCAATTTTCCTAACA
ACGGGCAACCTCTGTGCAGTGTAGGCCCGTTCAGTTGTTGAGGTTGTTTG
GGGGGCGTCACTCTCTTTGTGAGAGTCTTTGCCCGTCGACATGCGAAAAG
atccaattgcattgcgcaaaaagccgtgtagcccgcttcgagaAAGTAAA
CGGTTAAGAATATTAGATAATATTTCCTGATATACATCTATCTCATGATT
GCAAAGAGTTATTAACTTGAAATGTAGATCAAGTTGTGGATAATGATAAT
TCAAATAAAACGTTTATCATTTTGATCCAATTACCTGTTTAAATGGTATT
TTGTAGACCTATTATAGGGTTAATTAGTCAATGGTAAAAACTATGATAAC
AGTTTTTGGAATTGGGTCGAATTAAATGAAAGTAACATCGACTAAAACTT
AAACAGTTTGAATTGAAAAAGTGGCTCTAACAGATGTAAATCAAAAGGTC
AAAGTCTCCTTCTGCTAATCATCCTAGCTGTTCGCAAGAATAATTCTATT
TTGGCTTCCGGGTATGTCAGATATGATTTACTctctttgaaattttattt
ctcaactttatGGCTTTTTAAAGAATGGAAGCtttattggaaagaagaga
GATGGACCAAAGCTCCGATGGGTCATTTATCGAATTTGATACATTACATC
AAACACCATGCCAGTTGTCCAGTAGTcctaattttcaaagaaaatgggCT
GTAGATCACAAAATAGTTGTCCAAAATGCTAGAACTATTTAGACTACGAG
CAATGAAGGCATTAACATATATTTCATGGAAGAATTTGGCCCTGTGTGAA
ATTTAAaagttatatattttttcaaaattcagattttttNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAAGCCccattcatttgatttgaaaatcatgCTGAAATGA
CGTCGTTGCTAAGCTGTTTTTGCCTCATTCACCTCCGCTGGTGCCTGGCA
GAAACCAAAGTTTGGaacttcttgaaaaatttaatttcaaaattgcttGA
ATCATGTTCAAATCTAAACCAGAAACTAGATATAAAGAAGGAATACAGAA
AATTGATGGGTAAAGAAAGACTAAGAGATCTTGGATATTTTGAGTGGCAT
CCACTTGGACTTTTTGTTTCGAGCGCTGAGGAGGATAATATGCAAACACG
AAGTCTGGATGACAAGAGACAAACCCCTTGCTTCACTTTAAAGTTTAAAC
AGTTTTAGAACTATTTACATCACTCATCATTCATCCACCCCACTGTatcc
tttttttaaatggccaaaaattttctaaattaaaattGTGAAATGTTGTT
GAAATGTGGTATTAAACAGGTTTCATTTcagaaattgtaaaattgaaaaa
gataatGCACACACATGATTTAGGTCTttgaaatactgtaatttattgct
ttgtgaaaatttaaaagactgATCAAATTGTGtacacttttatcaaatta
atttgattaaattccACAGCATGGAGATTTATCctgtaaacatttaaaaa
aattgtacataaaattagtaaatcaataaaattcaGCTAAAATATGTTTC
AACTAATTTCTAGATAGCTAAGCCCTTTCTTAACCGAAATACCACctcaa
aattaaagtaaaatttaaatACATTCAGCAGAATGTCAGCACTGTTGTTT
TGGACtccaatatttttctaaagcttttgaaaTTAATCTTTGTTTCAGTC
TAATAAATTAAAATCATCTTAATTAcagtagaaaaaagttttcattacca
aaaataacataactaaaattcaatcaaaatttttgaaataaaatttctaa
ataaaaattgatatttgCCACTACATTCCAGATTCACTGCCAATTTATGT
TCACGTACACATTTTGGTCATTGTGAAGCTATGATCTTACCATTGCTGGG
AGTGTCAATATTGTCNTTCAATGAATAAATGTTAGTCGTGGATATAACCA
TTTTCTGTTGTTGACACCACAGAATGAGAatcctaaaaatgtaaaaaaat
gtacTCTCtttaaaaaagcaattttgaCAAGGTATCAAAAAGGTATATAA
GGTAGTAGGGTAGTAGTTCTTCGAAAGCACATTTGCTAAATTGTTTCCTG
TACTATCAGTAATGTATAAGAGGGAAGATttgtgaaaatcaaaaaaattt
aataattttagTTAGATAGTCAGTATGAAGAAACCTCCATCAGTCTGTCA
GCATTCTCATTCCAACAACATACTTTTCCCTCTCTTTtcatagaaaaaag
aaataaatatccAACTCCTACCTTTATATTTGGATGTGAATCtgtattta
aaagatttccaataGATATTgtcaatattttgatgaaaaagcttgtaaaa
gtCAAAAATTTCCACTTCACACTGATGGTGGGAGCAGAGTGCTTTCgaaa
aagattgtttttttgcCCGACATTCATACAAATCACAACAACTGGGTTAT
CGAGACTTCGACTTTTTCTGACGCAATATCACGTGAACAGAACGTGATCA
TCCTATTtatttgaaacaatgaaaactaCGCGCATATGTGAGGAGCTCTC
CGTCCAGTCGTTAGAAGTTCAtggattttttcacaaaattttgaaattcg
ggtctgtaaaatacacatttttcgtgctactatattcatgatatgcacca
ttgcaatgtcttccattccacccaatagctgattggttgaaagtgacgta
ttgactgattttcaCTTATAACCAATCAACTATTGGgtctgtgatgtaat
gtcagaagacattgttCGTGCTACTATCTTGAAATTTTTGACACACAATA
TTTGATGTACTATCTAAAATCCTGCAGAGTTTTAATAGGTTTAATAGGTT
TTAATACGTAGTTCATGAGATATCTTGAAATGCAGTGCCCTACCCCAGGT
TAAACTGCTCCAAAAGCCATTGCCAAGTAAACACCCCCTCGGAAAAGTTA
TTGTCCCCTGTTAACCTGAAAACCATCGCGATTCTCAAAATATAGATATG
TTTGAACccaaaaacagtttcaaaccTTTTCACTGTCAAGGTGGTACCTC
ATACCCCAAATTGCCTGGACTATAGAACGAAAATCTTATTAAACTTAATA
TTTTACGTCCGCTATACACCAAGTACTTTGCGGGAAAACTGCCTTCGGTG
GGGGAAAGTTTGTCCGTTTTACAGGCCTTATCACCCTTGAAGAGACTTTA
TTATGAGATGATGACTTAGAAACATTCCGTTCTAAAGAAAGAAATATCTG
CTTTTATACTAGGCCTACTTCAAACAGATTCCACTGAAAAAACTCGCACT
TCAATCGGGAGGTTTAGTTTAATTCAGTGAATTTGATTTTTCCATTAGGT
GCATATAGATGTGAACCATTGCGAGATTTCAACTGGGTATTACTAGCAGT
CGTTATGTTTGGTTTCTATATGTATTTCATTTTACAAGCCACGAGTATGG
TAAGTACAAACACACTTTTTAACCTCATAACTTGAATTTAATTGAATTAA
ATAATTGATTAatcaattaaattgaaaataattacaaCCTTTGGATTAAG
TTGCGAAGAAAATGCTAGTTTAGAGCTCCTTTTGACTCAATAAGTGAAAC
CGGTAGAAAACGCTCCAACATCTCATCCAACCTTCGAAAAAtggcatgtt
ggatgaaatgttggccTTAAATTAAAGAGTTTTACTAAAATAGGCTGGTT
GTCATTTTAGATCTTCTTTCttttaaaagcattttgctTGCTTATTTGTT
TTTAGACGACTTAACCCCTTCAAAGAGTACGGTTTTCGGTTAAAAGCCGG
CCATTTCTGGTTATTTGTTACAAGCTTCACACTTCATAGTTTTTCCATTC
ATTTCAGTACACATTGGTGAACCTCAACAACATGTTATGTCCTGCTGTCT
CCGATCCTTTTGCAGGGAGAAATTATCGATGGTTCGCAATGTTCCACCAG
ACTGCGCTCATCCTCATCTTCGGTAAAACTTATACTGCCATATTGTCTCT
CTTCCAAAGATTCCTGGCTTACTGCAAATTCAAAAGTAGTGACCCAAGGA
GGAAATTAACTAAGCATGTCGATAAAGATGAATAATGAAATTGTGATTTT
ATTTgtatttcgaaaaattgtatttttgtagcATTTTCATATCGGtcgtt
ttcattaaaatatgtTAGGAATATTTCACATGTTACTTATTTTTCGGGCC
ATATTTTGAAAACTCTGAAATAGGTAACTCTGAAGAAAGAAAACCCATTT
CCCTGACCCAGCTGAATCGATCATAAGCCCTTGGCCCTTCATTTTTCGAA
CATCCTTTCTCAAAACATTACTACACCAAAGGCTGTCAGGCGTTTTAACC
ACCCTCTAGTGGACTTAATCAACGATCTAAACTGATGGGTGATGTATTTA
CCCTTTAGAAACTTTGAGCATTTTAGATGATTTCACTATTTGAGTCCGAA
ACCTTTTTTCTAAGCCGTTACTTTAATGGgttaaactttcgcggggatta
aatttcgcgtttgggcctatccgcgaagttcaaaaatttcgcggggactt
aatttcgcgggtggcactgtTGGGTGgtaatattttcacgattttttggc
ttttactGCCAAATCATGCACGTTGGTTGTTtaaatacacattattagcg
cttctttgatgcaagtaaccattcaaatagtatttatctgacatattttg
agttttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050788TCONS_00050788Clytia hemisphaericatranscript
TCONS_00050789TCONS_00050789Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050789-proteinTCONS_00050789-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_187supercontigscaffold_187:46038..55294 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMEM164PREDICTED: transmembrane protein 164 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.15	58.16	28.55	22.96	19.64	15.45	34.77	35.68	30.15	34.4	29.45	25.1	15.28	15.5	12.57	15.7	17.74	17.66	7.66	8.51	18.65	18.62	22.44	23.4	27.13	23.75	12.19	10.74	15.57	14.62