XLOC_032145 (gene) - C. hemisphaerica

Overview
NameXLOC_032145
Unique NameXLOC_032145
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_185:19561..28501-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032145 ID=XLOC_032145|Name=XLOC_032145|organism=Clytia hemisphaerica|type=gene|length=8941bp|location=Sequence derived from alignment at scaffold_185:19561..28501- (Clytia hemisphaerica)
TTAGAATCCATTTAGAATCTTTATTACCTAATAAAATGGATAAAAGCAAT ACCTCAACGACACCCTGCTTACAAAATCATAATTCATCGAGGAAGATCTT GTTTTGGAGAATTCTGAATTGCATTATGGGAATATTTTTTATGGTAGCCA TGGGTTTACAGGTATCCATCCATTGAGTTTTGCTTTTTCTAAACCCCTCT CTCATTTTACTGTTGAAGATCTTTAAGTGAGTCTTAATAAATTGAAAATA TTTTTTTGCCAATAAATAATGAGTAAGGTTAGTCTGGTCTGGTTTCAAAA CACTGGCTTTGCTAAAAAATTGCTAAATTTTTTTCAATTTTTTTCAATCC TGGTCTAGCAAAAACAAAGCAATTTTTCATTTGATCGGGGGTTAGGGTTT AGTGTACAATTCCAACGGCCCCCTGAATTTCAAGATTTCACATTTGACTA ATATTTTAAATCTTTACCATTCTTTTTCAAATTTCAGGCAAACGATCCTG ACCCGGCTGTTTGGATGGTATGATTCATATTTCTAAATATTCTTTTTATG CAGTTTTCATTTCGAGTTATGGAGTAAAGTTGTTTACTGAAGGGACTAGA AAAGTTGTTGGAGTTAAGGAGACGTTCGAGTTAAAGAGACTTCACTGTAG TTGTTTTCATCCCGGGGGGGGGTTACTAGGTTTGCGAGGTGACGGGTATG TCCGAGCCGAAAATCGAAAATCGACCCTTTGAGAGACAAAATTTTGGTGA TTTTGGGACCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNAACTTTTTCCTAAATTTTGGTCCATTTT TTCCAAATTTTGGTTTGATTTTCACCAAATTTTGGTCAAANNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCC CCCGGGGTTTTCATCGATAGCCCTGCTCACCAAGAAGTTGATTTTCTTCT CTATTTTCCATCTTTATTCTCCAATTTTTTTCGAAATCTCCCATCGAACT CAAAAGGGCTACATGTATTTTTATAAGAACAAACTATATAAGAACATATG CGTCGATGGCAAAAAATATTAAGAACAAGTTAAAAACATTTTAAGGCTTT ATGGACTCTAAAACACCCATTTTCTTAGGAAATTACACAAAATACTCACA AAATGGTGCAAATAAGTATAGAGTATGTTAAGAACATTTTCAGGCTTAAA ACTCAAAAAGTTAAGAAAACCCTAAGACTTCAAAAATTTTGGATGAGCTC TACACGTGTATGTTTATTCGAATCCTGGCAAAATCTACAGTTCCAGATGC AGATTATTCTGGATTATTATGAGCAAAACTATGATTTTTCAGTTACTCTA CGGAATCACCGGTGCTGTTTCATTTTCAATCGTCATTTCACCTTCCCTTC AAGGTTAGTTTTTGTCCCGGTTTTTCTTCACTAGATCTGACAAGTTAACA TTTTTAAACGACGCTAAAATGATTTTTTAGTCATTCCTGACATGATTGTT GACCTCTGTGCCAAAATTTCATCTTTGCATCATTTTTGTCTTGGTAGATA TATAATTACACCAGAATATGTGTTTGCCAACTTGGTGAGAGAGAAACTGT CGAATCCAAATCTCTTTGTCTCCTCAATGTTGCTCAACTCAAGGCACAGC TACAAAGCTACTGGAAGTACTACTACTATTTTAAACACCCCTGTCTCACT GTCCAACCGAATTTCGGCAACAATTCAACAGGGTTGAATAATAACAAAAT AATCATAAACTGTCATCTTTTTATACAGGTAAAAGATTATGGAGAATTTT CGTTGCCGTACATTTCGTTTGTTGCTTAGCAATGCTTGCTTACGTCATCA TGTTTTACAGTCACGTGATTGATAAATCATCAAATATTTTACATAACGAG GAAGGAAGGTAATGTTGAAATGCTAAATTCGGCACTATTATTTTTAGAGG GCTGTAACTTCTGGTCCAAAAGATATTAAAACTGAATACAGATTTTAAAT CGGCGTGCGAGGTTAAAAATTTCAGAAAAGTATAAATTGACGAGGAAAAA AGCTTCTTTTTTTACTTCTTAATTTTTCATTTTCGTTTTTCGTTTTTGAA AACTTGAATTGATCCATCCTAGAAATGTGTCAGAATTTGTAATTTGCTAA TTTGCTAATTTTGGGATATTGATATTTCCACGTCAAAATAATCATTTTTA TCGATCTTCAATTTTAGAGAACTTTCGGGAGTGATTTTGGTTCAACTTTG GTTGGCAATCATACTATCTGTGTCCATATATCACGAGAAGTAAAAGTTTT TTTTCTTTTTTACAGAAAAACTTTTTTCCGAAGGCATTGTATCGTGCTTT TTAATAGTCAGAATTGCAATTTTTTACAGACTTCTACAACCACAGGTAGT ATGGCAGCACTGAGCTGTTAGAGTATGCCAGGAGCCTAGCTTTCTATAAT ATATGCAACTTTTAGTATAATGATTGAGTTCAAAGGTGTATAAGCTCAGA ATGTTTCAAATATAAAACTTTTCGGAATACCAGGTTTCATTTAAAAGACA GCTATCTTTTTCGTGGCGTCTGGCTGGTATCTAACCTCGGTTTCAATGCA AGAATTAGGGTTTGTTTTTAAGTTTCTAACTATATCCTTCCTTTTAAGGA TAAGGGAATGTTGTGGTNAATTAAAAGACAGCTATCTTTTTCAAGCCGTC TGGCGGGTATGCTAACCTCGGTTTCAATGCAAGAATTAGGGTTTGTTTTT AAGTTTCTAACTATATCCTTCCTTTTAAGGATAAGGGAATGTTGTGGTCG TAGCAGGGAATCGAACAACGTTCAAATGGGTAAAAAATTCCTCCATTTTT TGTCAAACAACTTTTTATGTTGGGTACTGTCTCTTATGAAATTCCGCAGA GGTTAATACATGTTTTTTTATAAACCTACCAAAATTTGAAAACAGGCTCG GAGTTACTTAACTGAAGCTCTCGACAGCTTGATAAGGCTAAAAAATGCCG AAAATCCGTAAAATCACAGCTAAAAACAGCCAAAATACATTTTTTCGTAA GGTGATGCTTGACCTATGCATAAATTTTTGCCATATCCGCGAGCCCAGAT ATGCTTATAAGTAATGCAATGCTTACAAAAAACATGTATTCACCGGGGAG CAAAAGAAGTCGTTTTCTTTATTTGGTATACCTTATTGGGGAAAAAATGT CGGAGTTTTAGTTAATTTTAGTCGGGTTTTTTTTTCGTCGGAGAAAAATT TCGTCACCTAGAGGCATATTCGTCACTTTTCCCCGACCAAAATTTCAAAT TTGTCACTTTCACCCGACTAAACTGTCCAAAANATTGGGGAAAAAAATGT CGGAGTTTTAGTTAATTTTAGTCGGGTTTTTTTTTCGTCGGAGAAAAATT TCGTCACCTAGAGGCATATTCGTCATTTTTCCCCGCGACCAAAATTTCAA ATTTGTCACTTTCACCCGACTAAACTGTCCAAAAGAAATGGTTTCCTTCA CTAGCTCGAAAATGTATCTTGTAATTCGACGTAAAGCACTAATTTTGGTA AATAAAGGTGTAAAAAATTAGATTTGAATTTGGTTGCGGTATCATAAAAT TTCGGGTAAATGTTTTAGTCAGGGATAAAAAAATTGGCTACAAGTTTTGG TCGGGTGATGAAATGTCGGGGAAATATTTCGTCACCCCCTCAAAATTTTC GTCACTTTCCCCCGACATTTTTTCCCCGATGAGGTATAACAAAAGGACTG ATTGGCTTTTTGCAAAGGATTTGCCGGGTTTAGGTTCTCTTGAGTAACAA ATCCTAATTGTCAAGGTTGTAGATTTGAGCCCGACGCTAATAAAGTTGGG CTTAAAAGTTAAAACCGAGGTTAGATTTTAATGACCCAAATGATAAATAT GGCTTTTAGGCTCTAACTCAAAACAAATTTTTTCTCAATTCATCTTTTCA GCATAAACAACTTGTTATTATATGAATGGTTTATTATCATGTCCGGTGTG GCAGTTCCGCTGTTTTGCACTTTGTTTCTATACGGAAATATCGACCAATC GACATTACCGGACCATTGTAAAGGAATTCTGCAACGATGGGTGACATGAG GTCTGTGGATGACAATGTTCTTGAAGGAAAGTTGCTAAATGAAACAAACA CAAACTAAAATTTCAGCAACTTTTAGTATTGACTGGAACAGCTGAAGGAA TAGTCATTAGGTTTAAAACTTAGCAATCAATCGTAGACTCTCAGAAATAT TTTGGTGTAATACACTTATCAACACTGATCTTATCAACCATGAGACAATA TTTTGAGAAAGGCAAGACAGTGTCCGGGGGGAGTGATAAAAAGGACACTC TTTTCTAGTATTTTTCAAAAAGGCTGATTCCGTTACCTAAACTTTAGTGA TTTCAGGAAGGGCAGCGTCTGATAACCGAACGCTAAAAAGCATGGAAAAT GGTCTGACCGGCATGGAGTTCTGAAGTCTATCTCAAAATAACCACCATCT TCAATTTTATTTGATACTATTCCACCCCTGAATAAAATTCAACAAGATTA AAATTGTGATTCAATTCAAATTCTGTCCAAACACTCGCACCCAACCCTCT CTCAAAATAAAGCGTGGCAAAGATTGATAACAGTATTTATGATTATATTT GATTATAAACACATAGGGGATCGAGCTCGAATTTATCAGCGAGTACAGCC AATACAATTAAGGTTGTCTTCGTTCGAATCCCCTGAACTCGAATCCAGTC CTTATTTTGCATTTAGTGCAGTTAACAAGATTGTAAAGTATTTTTTTTTT AATTTTTAGTATATTTTACCAAAAAAATAAGAAATTTATACAAAATTCAT TAGTAACAACAAACACATTTCCCTCAGAAATTCTGGTACAAGACCTGTTT TTCTACACAATACACGCTTTTTTATAAGAATATTCATGATAAAATTACAC CATTATGAAATTTGGCAACTGAACCAAAAAATGCCGATTTTTAGAGCATT TTACCTGTAAATTGCCAATTATTTTCAAGCAATGTTAAAAACTTTCACAA AAATGCCATATTTTTGCTCAAGGTATATACTACATGCTAGAATTAGGCTG GGTCGGATTTTAACCTTAGAATATACCGTAAGAATATTTTAGGATGGTTT TCCCAAAAAGTTAAGGATATCCATCAAAAAATGAAAAAAAAACCATTCTT ATAAAAAAAACGTGTACTAAATTATGTGTATGTGAAATTGAGATAATGCT AATAATTTAAAATAAAAATCGATCAAAAATTGTCACCAAGAATCTACTAC CTACATGTAAACACTTTGAAAAAGAGACTTTATCAACACATTTAGTTGCC TTATTTTTTGAAACTTGAACTTATCGAATCTTATTTTTTTATCATTTTAA AACAGAATAATAATCTAACTTAACTTAGGTGGAACCAAATTCTGTGGCTT AGGTTCACCTTATAACCTATGGTCAAGGCAGCGTTTTTATGATCTCAGAC GAAAAATGGACTACAGTTCTGAACATTCTAAAAATAAAACAGCCAATTTT ACGATCAAAATGATATGATAATACCGGAAACCAAATTAGTTTGTNAACAT TCTAAAAATAAATATTCAACGAGGCGAAGCCGAGTTGAATATTCATCACC GAGGGTTGATAAATCCAATAACCAACGTAAACCTATTGAATATATGTTTT ATTATATGCCCAAAGACGAAAACAAGTCATAAGTTTCTATTTTGTAAAGA GATTCACACAAAACTCTTACACAAATCGAACATTCGAATGTTTTTTTCTT TTTAACTGCTTTTTAATGACTTAAGTCATTCAATTGTTCACGAAATTCAC AATTGAACTCTTTTATTGTCTCTCTTTAATAGCAACAAAATAAAAGTGAC AAAAAATCAAGTTTCGAAAAAAAGTTTGAAAAAAAAAATTCTACTGTGGT ATAATCCCGGGGGGGGCACTGGGTTTGCGGACTGACGGTATGTGCGGGCA AAAAATTGGCTTTTAAAATTGCACCCTTACAGTGCAGCAAAAATCAGTAA AAATCATACCCTTAGAGTGCATTTTCCCCCAAATTTTCGATCCCTTTCGT GCAAAAAATGGTCAAAATTCTAGCATTTTTGGTCAAAATATCTAGATTTT TCAAGAATTTTCTGAAATTTCTACCCTTACAATGCATCTCTACTTTTTCC GACCCTTACAGTGCATTTTAAACATATTGGAAAAGGTACCCTTAGGACCC GCACATACCTGTCGGGCCTTTTGCCCAGCTGCCCCCCCCCGGGGGTATAA TACTGTGGTATATCAGGAATTATTCAATGGCTGTTTTTGCCTACGGGTAT ATAATAATCATTTTTATTGATCTTCAATTTTAGAGAACTTTCGGGAGTGA TTTTGGTTCAACTTTGGTTGGCAATCATACTATCTGTGTCCATATATCAC GAGAAGTAAAAGTTTTTTTCTTTTTTACAGAAAAACTTTTTTCCGAAGGC ATGGTATCGTGCTTTTTAATAGTCAGAATTGCAATTTTTTACAGACTTCT ACAACCACAGGTAGTATGGCAGCACTGAGCTGTTAGAGTATGCCAGGAGC CTAGCTTTCTATAATATATGCAACTTTTAGTATAATGATTGAGTTCAAAG GTGTATAAGCTCAGAATGTTTCAAATATAAAACTTTTCGGAATACCAGGT TTCATTTAAAAGACAGCTATCTTTTTCGTGGCGTCTGGCTGGTATCTAAC CTCGGTTTCAATGCAAGAATTAGGGTTTGTTTTTAAGTTTCTAACTATAT CCTTCCTTTTAAGGATAAGGGAATGTTGTGGTCGTAGCAGGGAATCGAAC AACGTTCAAATGGGTAAAAGATTCCTCCATTTTTTTGTCAAACAACTTTT TATGTTGGGTACTGTCTCTTATGAAATTCCGCAGAGGTTAATACATGTTT TTTTATAAACCTACCAAAATTTGAAATCAGGCTCGGAGTTACTTAACTGA AGCTCTCGACAGCTTGATAAGGCTAAAAAATGCCGAAAATCCGTAAAATC ACAGCTAAAAACAGCCAAAATACATTTTTTCGTAAGGTGATGCTTGACCT ATGCATAAATTTTTGCCATATCCGCGAGCCCAGATATGCTTATAAGTAAT GCAATGCTTACAAAAAACATGTATTCACCGGGGAGCAAAAGAAGTCGTTT TCTTTATTTGGTATACCTTATTGGGGAAAAAATGTCGGAGTTTTAGTTAA TTTTAGTCGGGTTTTTTTTTCGTCGGAGAAAAATTTCGTCACCTAGAGGC ATATTCGTCACTTTTCCCCGACCAAAATTTCAAATTTGTCACTTTCACCC GACTAAACTGTCCAAAAGAAATGGTTTCCTTCACTAGCTCGAAAATGTAT CTTGTAATTCGACGTAAAGCACTAATTTCGGTAAATAAAGGTGTAAAAAA TTAGATTTGAATTTGGTTGCGGTATTATAAAATTTCGGGTAAATGTTTTA GTCGGGGATAAAAAAATTGGCTACAAGTTTTGGTCGGGTGATGAAATGTC GGGGAAATATTTCGTCACCCCCTCAAAATTTTCGTCAATTTCCCCCGACA TTTTTCCCCCGATGAGGTATAACAAAAGGGCTGATTGGCAGGGTTTAGGT TCTCTCGAGTAACAAACCCTAATTGTCAAGGTTGTAGATTTGAGCCCGAC GCTAATAAAGTTGGGCTTAAAAGTTAAAACCGAGGTTAGATTTTAATGAC CCAAATGATAAATATGGCTTTTAGGCTCTAATTCAAAACAAATTTTTTCT CAATTCATCTTTTCAGCATAAACAACTTGTTATTATATGAATGGTTTATT ATCATGTCTGGTGTGGCAGTTCCGCTGTTTTGCACTTTCTTTCTATACGA AAATATCGACCAATCGACATTACCGGAACATTGTAAAGGAATTCTGCAAC GATGGGTGACATGAGGTCTGTGGATGACAATGTTCTTGAAGGAAAGTTGC TAAATGAAACAAACACAAACTAAAATTTCAGCAACTTTTAGTATTGACTG GAACAGCTGAAGGAATAGTCATTAGGTTTAACACTTAGCAATCAATCGTA GACTCTCAGAAATATTTTGGTGTAATACACTTATCAACACTGATCTTATC AACCATGAGACAATATTTTGAGAAAGGCAAGACAGCGTCCGGGGGGAGTG ATAAAAAGGACACTCTTTTCTAGTATTTTTCAAAAAGGCTGATTCCGTTA CCTAAACTTTAGTGATTTCAGGAAGGGCAGCGTCTGATAACCGAACGCTA AAAAGCATGGAAAATGGTCTGACCGGCATGGCGTTCTTTAAAGTCTGTCT CAAAATAACAACCATCTTCAATTTTATTTGATACTATTCCACCCCTGAAT AAAATTCAACAAGATTAAAATTGTTATTTAATTCCAATTCTGTCCAAACA CTCGCACCCAACCCTCTCTCAAAATAAAGCGTGGCAAAGATTTATAACAG TATTTACAGGTTGACTTCGTTCGAATCCCCTGAACTCGAATCCAGTCTTA TTTTGCATTTAGTGCAGTAAACAAGATTGTAAAGAACATGTAAAGTAATT TTTTTTTTAATTTTTAGTATATTTTACCAAAAAAATAAGAAATTTATACA AAATTCATTAGTAACAACAAACACATTTCCCTCCGAAATTCTGGCACAAG ACCTGTTTTTCTACACAATACTCCGAAATTCTGGTACAAGACCTGTTTTT CTACACAATACTCCGAAATTCTGGTACAAGGCCTGTTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050753TCONS_00050753Clytia hemisphaericatranscript
TCONS_00050752TCONS_00050752Clytia hemisphaericatranscript
TCONS_00050750TCONS_00050750Clytia hemisphaericatranscript
TCONS_00050749TCONS_00050749Clytia hemisphaericatranscript
TCONS_00050748TCONS_00050748Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050753-proteinTCONS_00050753-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_185supercontigscaffold_185:19561..28501 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMEM220transmembrane protein 220 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22 0.34 0.13 0.19 1.67 1.22 4.52 4.68 4.44 2.76 3.3 4.57 7.32 7.41 3.47 5.17 4.1 5.55 8.24 5.91 8.78 8.41 5.78 8.3 3.9 5.5 0.42 0.28 1.98 1.33