XLOC_032118 (gene) - C. hemisphaerica

Overview
NameXLOC_032118
Unique NameXLOC_032118
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_183:15718..19721+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032118 ID=XLOC_032118|Name=XLOC_032118|organism=Clytia hemisphaerica|type=gene|length=4004bp|location=Sequence derived from alignment at scaffold_183:15718..19721+ (Clytia hemisphaerica)
CTCGACTATTGAGATGGATCAATTATGCTTTACTTGTGATATTGTATTGA
CATCTTTTCTAGAGATTTAGAAGTTCCAGtctattattttcttttctaag
AATAAGGCATTCGGCATTGTCTATATGGAAACCCTGGACTTTCCATGATG
ACTGACGAAGTTGTGTAAGAAACGTAAGGATGGAATATATTCAAACTGAA
TATATTTGAATATATTCAAACTCACGAACAATTTAATtgattgagaaaaa
aacaaagtcGTAAAGAAAAACATTGGTTCAATGAAGAATATTCTTGGTTC
TCCTTTACGGTTGAAAAGATGGATGGTATTCATGGTATGTACCATTGTAA
TTTATTCTGACATTACAATGCTTTTAAAACATGCGAAATATAAGATGGCG
GACGGAGATGCGCATATTCAAAATGGCGAACCAGAAGAAGAAAACACTGA
ATTTAATATCTCTACACTATTTAagaacatcaaagaaaaccaaAAGGAAC
CATCAACTACCTTTATTGTACACATAGAAGAGATATTACAATCTACCAAG
AGAAGTCATCACCAACGAACTAATTCAACTTCAAAACTCAGCTCTTGGtc
gtaagtgacgtaaaatcagacaatacgtcacttgcaaccaatcagctgtt
aggTCCATGAAAGACATTGTAATGTGCATACCAtgaataatatttgaaaa
aatattgccAAACCATTTAATCCATTTCAAATGTTAACTGCATCACAAAC
CATGGCTGCTGCTTCATTGGGAACTATCCCAATCAAGAGTCCATCACTGT
CATCATTATCTCCAAAGGAAGTTAATCTTCCTCCTACTTCAATGTTGCCA
ACTTTGCGAACACTGTTTACACATAGACGTAGATCGTTACACACCACAAG
GACTCATGGGAAGGAATTGATAAATGTATTGGAAAATATACCACATAATA
ACAATACTAacaaacaaacgattttcttttTGGCTGATGGGTTCGGAGTA
ATCAAGCAAGCTCAAAGAATGTGGGAACGAAAAGAAAGCGATCTCGTGGA
TTTATGGAGTTTATGGAAACCTTTGACTTTTCATGATGATGAGAAGTTGT
GCAAGAAATGTAAGGTCAATTTTTAATCTattgaaaattattataaaGTT
ATTAGTTATTTAATCTATTAATATTAGAACTCTTTCAGCaacaacaaaga
tgaaaaactcGTGATGGTTGAGAATTTGATTCATAAAATTAACAATACCA
AGTACCAAAAATGCCATTAAAGGACAAAAAGCACAATTGAttgaaaagta
agaaaaagtaTTTGAAGACTATTTTAACCtcaattttcgcaaattttaaa
atacttcttaaaatcttttttttctaaaaatagaaaacttAATGAAGAAA
ACTTTCTCAAACCTTATTGATACCTATCCAAACAAATCATTTTGCCTGAT
CTTCTAATCCTATATCGTTTCTCTCTAGGAAATCATAGCCCCACCCATTC
ATTGTGACTGATCAAATGTTTCGCTCCGGAGTAATCAAAAAACTCAACGC
AAGCAAAGACATTACGGTTGGAGAAAGAACCAGTTTGTTTGCCGGCCTAT
GGGACGAATGTATCAAATATCAGATGTGAGTTTACATAAATTTTAAGAAC
AGAGTGAACAGAAACCATTTTCtatcttttgaaaaacattgaatGACTTG
CTtatattatacaaaaatctCCTGACAGAAAATCGACTCACGCAGAAACT
TGCGGAAAATTTAAGCACGTGCTAAGAAAGCTGaagttttgaatatttta
ttttcttaagaaTTAACCACTAAAATATAACTATACTGCTCGGCATGGCA
AATGTTTTTTCCGTACATggacgggagtatcatcgacggtcgggagtatc
tcatctttgttgtttggaattgcttaggtcatgGTTGCTAGTAACAGCCA
TGGTCTCTGTGTCGGGTGCATACTGGAatccttgggccccgcagggttgc
tagtaacaaTATTTTTGATGCTTATATGTTGCTATTTTTAGGTATCCAGA
TCACGAAAAGTATTCAGACATGATCAAAGCTGTATTTATTCGCTGGCCGA
AGTTGGTTGTTGGGGAGCGGGATCATGccacgatattttggacaaatCGA
TTGAAAGCTTACGTCAAGCGCGAGCGAAGCAGAATGGATGATAATCCGGA
AGTCATCGAAAAGCGCCAAAAATTTGGCAAACGAAAAGCAAGCGAAGACC
AGTCAGTTGAAATgctaaaaaatccaaaaaactttgGGGATTGATCTTCC
CAACAGCCCTGCTGGAGAAGATCAGCATTCGCTTCAAAAACACATTGAAT
CGTTGAAATCGCAAAGTTTACTGCCGCAAGCCGCAAGAAACGCAGAACTA
ATTGAGACTCGTTTAGATCTAACATTACACGATCGACGTGCGAAACTTAT
CAATAATGATATAACTGTAAAAAATCTGATCGACATTTACCCAATCCTTG
CGAATGGTGAACAGGTAAGCATAATTCGGCTAATTATTGAATCGAAGGGG
GGGAGGGCAACTAGGCAGAATTGGGTACGGAGACGTGCCACTGGTCAGGG
TCCTTTGTTTAGGCTCTGaaaatatctgacagggtcccaaattaaCTAac
tttcaagatgtgtatctgacagggttgcATTTAgctaattttggacattt
ttcagggtggaaatcagaaaattattcaatttttgtctacttttagtcat
ttttgccacttgggtgaaaatgggaaaattttgcaatttttcgttctgat
aGGGTcccaattttacaaaaattatatctgacagggtccacttctCAAAC
TTAGTGAATAACAGTTAAATTCCATTGCCTGCGAAATCGAGCTGAAGTAT
TAGGTTGGGTACACATTTTACTAATGCGTTTACttattttcatttcagat
tTTGTTAGAGTTCCAACGCTTGGCTGGCTTTAAATTGATCGGTAGGCTGG
AGGAATCTATGCCCGATTACGCACGTGCTATCATCCACTTCTCAAAATCT
GACATGGCGGTGGCAATCAGCAATGcttcaacaaaaaaagaaaaagactg
tAAGTTGCACATCAGTGCTTGCCATTTAAGGTTGAGACATTTCACTGGGC
GGTATCCGTCGTCGCaaacatcaaaagccctttggatagtATAGTAGGGT
TTAAGAATGGTCAATCAAATTTAGACATTTGTATTAagaaacaggggggg
gggctgcCTACAGTCCGGCAGTTGGCAGAAAATCGAAAAGTTAATATCCG
GCGTTTAGGATCCTTGGAACATAATTGAAAGTAAGAATATAATGAATATG
AACAAAAGCTTAAAAATATAACTTTGTTTTTCAACAGATCGATATGCTGT
TGTTGGAGTAATGACCTTACCGACATTGTTTCGAGAAGATCCAAAACACT
ACTACGGAATTGATAACACCCTAACTCCTCGAATCAGTCATGCTAACCCT
GACATTTTCGACGAACAAGAATTTTTCATCCACCTCGATGGCATCACTAT
TGGAAAGTCGAGAGATCCTTTGACGGCACTGACATTGATGTACAGTTGCT
ACTACGTGTTCAACTTAGTATACCCAAAGGAGTTGCAAAGTTCCTTGGAA
TTTATCCAGCGTTTCTTGGTAAAAATCGGAGATGGTAGCAAGCCATCAGG
CAAACTAATTACAGCAAtcacaaaaataagaaaatatgcTGGTTGAAGTT
CAACCACTGtatctttttatctttgtgacaTTAGCAGTGATCAGTTTTGG
CGATGGCTTGCTTTCGTCGCCGGTTTTAACCACGAAACTCAAATGAATAA
ATGAGTCCGTGCAGacattttgatatttgaaaatttacaaagTTACGCTT
CAACTTCTTTTCTTTGAgtttgaatattgaatattgaaAGCACTATATTT
TCTTGTCAATGTTTTTTTGCCAAATGAAAATTAGAAAGGCTAAAACTGCA
CTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050689TCONS_00050689Clytia hemisphaericatranscript
TCONS_00050690TCONS_00050690Clytia hemisphaericatranscript
TCONS_00050691TCONS_00050691Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050689-proteinTCONS_00050689-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_183supercontigscaffold_183:15718..19721 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.31	0.22	0.34	0.4	1.57	1.2	1.45	1.78	0.73	1.36	0.71	0.95	0.59	0.59	0.22	0.23	0.33	0.29	0.46	0.42	0.57	0.39	0.25	0.31	0.59	0.81	0.14	0.19	0.18	0.29