XLOC_032020 (gene) - C. hemisphaerica

Overview
NameXLOC_032020
Unique NameXLOC_032020
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_179:544947..550013-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032020 ID=XLOC_032020|Name=XLOC_032020|organism=Clytia hemisphaerica|type=gene|length=5067bp|location=Sequence derived from alignment at scaffold_179:544947..550013- (Clytia hemisphaerica)
TATTTGTTTGATTGTTTGAAAAGGATTTTCGAAAAAATTTGACGTGTCAT TGGCTTAGGGGTCACCTGAATTCTTAGGGGGCACCTAAAACCTGCTGCCA AGCCATGAAAAATCGCATTTCGCAGAACTAATTTTCGTGGTAGACACCAT AAAACGCGAAAATTGGTTCCCTTAAGGTAATTATTATTTAATATAGAGCT GGTTTCATAACTTTGCATTGGAAGATATAGTCGTCTCCCAGGATGGCTGA GATGGCTTTCAAAATATATTATAAGAAGTGTTGCCTTCAATGAAGCTGAT ATGGAATATACTTTTTAGTACATTATATAATGATAAACAGATTTTTTGAT TTGTTTTATTAGAAACCAGCAAGGTTATGATGAAGTGGATCAATTTCCTC ACAGACGCCAACCTCCAAATAAAATCAATGATGTCATCAACAGGTATGGA CTTCCTACAGGTGATTTTGTGATGCAATATTCCAATCATGTCTTACAGTA CGATACTGCAAGAAAAATTCCAAAATGGGTCTTAGAGCATATGTCAAAAG ACGATTTGAAAGGCCACGCAGAACGAAGTCAGTGTAATTTCAAGGTAGAT CAAAGTGTACCGAAACAGTTTCGCTCACACAATGAAGATTACCTTGGAAG TGGTTTTGCTCGTGGACACATGGTGCCAGCAAGTAAGAAACGTTTCACAT TCTTTAACTATTTCACATACTCTGGGACAACACTCACAACATAACCTGGA ATGATTTTATTTATGAATCTAAAAATTCACATCAAAAGAATTGGTTGAAT ATACTGGATTGTTATGTAAACAAAATTACTATCATCTAAATCAGAAATTG TTCTTTTAGGGTATAGCTAAAATTTATGAATTTACACATTGAACTATCCT TCTTCCACTTTATAGGCGACGTAAAGAAATCACAAGAGAGTATGCAAGAG ACATTTTACCTCACCAATATTCTACCACAAGATTTTGATAATAATGGAGG TTTTTGGTATCGTATGGAAAATTACTGCCGTTCCTTAACCAACAGATTTA CTGATGTTTACGTTATTTCGGGTCCACTGTTCCTTTCGCATTTTGTTCAA AATAAGAAAATGGTGACTTTTCAGGTATGGTTGTTTACCTTCTTTTAAAT TTTCATTATGGAGTAGAGTAGTTGGAATAAACTGGTTTAAGTGGTTTTTT TATGATCATATAACGAAAAGCTAATAAATGACCCTGCCCATCAGACAAAA TTTTGACCCTGTTTGACGAAATTTGTACCCTGTTAGACGCAAGAACCCAC TCTGACAAGTGGTGGGAAAGACCAAAAATCAACCCTGTCGGATTAACTTT CAAAATTAGTTGATTTGCAACCTGTGAGCTTGTAAAAGGTACTCATACCA GTGGGACGTCTTTTACCCCTATTTCGCTTGAGTAACCACTCTTGGTCCGT AATATTGATAATACTATATTGTTATATCAGTGTATCATGTCTCATGTCTA TCATACGTTTCCCTAAACCCTGCTTAGAACATGGGCCCCGACGAGCCATT TGGAGTGGGGCTTCCATTATTTTGGAAAAAAATGTCGCCCATCATGGTTA GACAACAAAGAAACCCACCATGGTTAGGCAACAAAGAAACCCACCATGGT TTTAGGCAACAAAGAAAAACGTTCATTCTTTACACCCTCAAAACACNTTT GATTGTTTGAAAAGGATTTTCGAAAAAATTTGACGTGTCATTGGCTTAGG GGTCACCTGAATTCTTAGGGGGCACCTAAAACCTGCTGCCAAGCCATGAA AAATCGCATTTCGCAGAACTAATTTTCGTGGTAGACACCATAAAACGCGA AAATTGGTTCCCTTAAGGTAATTATTATTTAATATAGAGCTGGTTTCATA ACTTTGCATTGGAAGATATAGTCGTCTCCCAGGATGGCTGAGATGGCTTT CAAAATATATTATAAGAAGTGTTGCCTTCAATGAAGCTGATATGGAATAT ACTTTTTAGTACATTATATAATGATAAACAGATTTTTTGATTTGTTTTAT TAGAAACCAGCAAGGTTATGATGAAGTGGATCAATTTCCTCACAGACGCC AACCTCCAAATAAAATCAATGATGTCATCAACAGGTATGGACTTCCTACA GGTGATTTTGTGATGCAATATTCCAATCATGTCTTACAGTACGATACTGC AAGAAAAATTCCAAAATGGGTCTTAGAGCATATGTCAAAAGACGATTTGA AAGGCCACGCAGAACGAAGTCAGTGTAATTTCAAGGTAGATCAAAGTGTA CCGAAACAGTTTCGCTCACACAATGAAGATTACCTTGGAAGTGGTTTTGC TCGTGGACACATGGTGCCAGCAAGTAAGAAACGTTTCACATTCTTTAACT ATTTCACATACTCTGGGACAACACTCACAACATAACCTGGAATGATTTTA TTTATGAATCTAAAAATTCACATCAAAAGAATTGGTTGAATATACTGGAT TGTTATGTAAACAAAATTACTATCATCTAAATCAGAAATTGTTCTTTTAG GGTATAGCTAAAATTTATGAATTTACACATTGAACTATCCTTCTTCCACT TTATAGGCGACGTAAAGAAATCACAAGAGAGTATGCAAGAGACATTTTAC CTCACCAATATTCTACCACAAGATTTTGATAATAATGGAGGTTTTTGGTA TCGTATGGAAAATTACTGCCGTTCCTTAACCAACAGATTTACTGATGTTT ACGTTATTTCGGGTCCACTGTTCCTTTCGCATTTTGTTCAAAATAAGAAA ATGGTGACTTTTCAGGTATGGTTGTTTACCTTCTTTTAAATTTTCATTAT GGAGTAGAGTAGTTGGAATAAACTGGTTTAAGTGGTTTTTTTATGATCAT ATAACGAAAAGCTAATAAATGACCCTGCCCATCAGACAAAATTTTGACCC TGTTTGACGAAATTTGTACCCTGTTAGACGCAAGAACCCACTCTGACAAG TGGTGGGAAAGACCAAAAATCAACCCTGTCGGATTAACTTTCAAAATTAG TTGATTTGCAACCTGTGAGCTTGTAAAAGGTACTCATACCAGTGGGACGT CTTTTACCCCTATTTCGCTTGAGTAACCACTCTTGGTCCGTAATATTGAT AATACTATATTGTTATATCAGTGTATCATGTCTCATGTCTATCATACGTT TCCCTAAACCCTGCTTAGAACATGGGCCCCGACGAGCCATTTGGAGTGGG GCTTCCATTATTTTGGAAAAAAATGTCGCCCATCATGGTTAGACAACAAA GAAACCCACCATGGTTAGGCAACAAAGAAACCCACCATGGTTTTAGGCAA CAAAGAAAAACGTTCATTCTTTACACCCTCAAAACACCCTAAGACGTTTA GGGAGAACAACAGTTTTAATGATTTGATTTAGTCTGTTTAAAGTTGTTCT AATGTTAGGTTAAACAGGTTATCGTAACAATTTGATTTTTTTGCTTTAAT CTATAGGTTATTGGTGATAACAACGTTGCAGTACCCAGCCACTTGTTCAA GATAATCCTTGTGGAGAACCACGGACGACCCATCGCTGCAGGAGCTTTCG TTGTTCCAAATGCACCGATTGCAGATGATAAAGTACTGACTGATTATCAA GTTTCGTTANGACCCTGCCCAACAGGCAAAATTTGTACCCTGTTTGACAA AATTCGTACCCTGTTCTATACAAAAATCAAACCTGACAAGTGGTGGGAAT GACCAAAAATCAACCCTGTCAGATTAACTTTCAAAATTGATTTGCGACCC TGTCAAGACATTTTAAGAGCTTGTAAAAGTAACCCATACCAGTGGCACGT CTTTTACCCCTATTTCGCTTGAGTAACCCCTCTTGGCCCGTAATATTGAT AATACTACATATATTTTTATATATCATTGTAGGTAGAGAGTCTATCATCA TGCTTCCCTAAACCCTGCTTGGAACATGGGCCCCGGCAAGCCATTTGGAG TGGGGCTTCTAATAATTTGGGAAAAAAATTCGCCCACCATGGTTAGGCAA CAAAGAAACCCACCATGGTTTTAGGCAACAAAGAAATCCACCATGGTTTT AGGCAACAAAGAAAAACGTTCATTCTTTACACCCTCAAAACACCCTAAGA CGTTTAGGGAGAACAACAGTTTTAATGATTTGATTTAGTCTGTTTAAAGT TGTTCTAATGTTAGGTTAAACAGGTTATCGTAACAATTTGATTTTTTTGC TTTAATCTATAGGTTATTGGTGATAACAACGTTGCAGTACCCAGCCACTT GTTCAAGATAATCCTTGTGGAGAACCACGGACGACCCATCGCTGCAGGAG CTTTCGTTGTTCCAAATGCACCGATTGCAGATGATAAAGTACTGACTGAT TATCAAGTTTCGTTATCACAGATCGAAAATATGACTGGATTCATGTTTTT CCCTAAAATAGACATGAACAATTTACCAAATTTATGTTCGAGAGACAACT GTCAGTTGCTAACAAAAAATACGGCTGATTTGAATATTTTGATGAAAAAC TTGAAACGTGTTCGGAGTAAAGAGGAATTAGACAATCTGTGGAATCAAGT TCTTCAAAAGAACGTACAGCTCGACCAAAAATTCATGCAAATGTACTGGG AGAAACGGAAGACATATGAAAAAGATAATTAAATTGACTTTGAGTGTGCA TTGTTTACAAGAGAAATTAGTATCAAGAAAACAAGATGTGTTTTCAGACT TGTTTTCGTTTAATCAGGTATGCAAGGTATGATAATGTTTTTAACTGTGA GCTTAGTGTCTGATTTCGAGTTACCCTTTTGAAAAGTCCTTGTCGACTTA ATCACGAAAAATTGACCATTTTACACACACAGTGTAAATAATAGGTGGAA GGTGTTTTTTTAAAGGTGTGTCTTTGGCTGTTCGACTTAGGTGATTGTGA ATATTTTGTGAATTCGCTTAATTTTTTTTGAGAATTTTCTAAATTTTTAT TGGAGTATTTATAGATGTTGTTTATAAAATTTTATACTGAGAAAATAAAA AAATTGAATTAAAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050566TCONS_00050566Clytia hemisphaericatranscript
TCONS_00050565TCONS_00050565Clytia hemisphaericatranscript
TCONS_00050564TCONS_00050564Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050566-proteinTCONS_00050566-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_179supercontigscaffold_179:544947..550013 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.59 3.48 8.48 9.34 15.64 11.96 14.96 14.44 9.85 9.63 10.44 7.8 5.55 5.29 6.61 6.83 10.17 12.08 4.78 5.4 8.95 9.43 10.23 9.1 7.93 8.53 6.13 5 6.3 7.71