XLOC_031992 (gene) - C. hemisphaerica

Overview
NameXLOC_031992
Unique NameXLOC_031992
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_179:251486..257015+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031992 ID=XLOC_031992|Name=XLOC_031992|organism=Clytia hemisphaerica|type=gene|length=5530bp|location=Sequence derived from alignment at scaffold_179:251486..257015+ (Clytia hemisphaerica)
TTATAGACCAAATAATTAAATCattcaaacaaaaataatattgaaattaC ACAGTCGTATAGTCCGATTGAATCATGGCATCAGCGAACAACGAGCCAAG CAGTTCATTGGGTATTGCAAACAAAGCCACCAATGTGGTCTTTCAAAAAG GTCACGTGACACGCAAGAAACGTGGACAAGTGTTGGGTCAGTCACATGGT TTTAGGGGATGTACTATTTGGTTTACAGGTAAACAGTGATAATTCattta tatatacttttaatCCATCAATCCTTTTGGattattaaatttcaattttt cccgACTTCGGTTCGATTTGAAAtgtaaattttataagaattagcCTTTG TTTTCTGATATTTTCAAAGGTTGTAGTTGAACACATCATTACGATTAACA CACCTATCTCACCGACTTGATTGAACTTTGCAATTAAACTAATCCAATTC CAAATTATTCGATCTCAGGTTCCAATCTTCGTCTTTTTATTCTTTCTATT AAACTATCTGTCTATAGGTTTATCGGGAGCTGGAAAGACAACTATCAGTT TCGCACTAGAAGAATATTTATGTTTAAGGGGAATTCCAACCTATGGTCTG GATGGGGATAACATGAGAACTGGTCTCAATAAAAATTTAGGGTTTTCCCC TGAAGACCGTGAAGAAAATATCCGTCGTGTCGGGGAAGTTGCTAAATTAT TTGCCGACGCTGGTATAGTTTGTTTGTCCAGTTTTATTTCACCTTACGAA AAAGATCGTTTGAAAGCACGTAAATTGCATGAAGAAGCTGGCCTCCCGTT CTTCGAGTGCTACGTCGATACGCCGTTAAACGTATGCGAGACGCGCGACG TGAAAGGTCTGTATAAGAAGGCCAGAGACGGCGTCATTAAAGGATTTACC GGTATCGATTCACCGTATCAAGCACCGAGCAATCCAGAGCTTGTTTTGAA AGCTGGccaacaaagcattgatgaatGCGTCCAAGAGATTGTGAAATTAC TGGAGAAGAATCACATTGTACCTCTCACAGTCATCAACGAAGTCCGTGAA CTCTTTGTCAATGATGACGAGTTACACGAACAAAAAGTGATCGCTGAATC ATTACCCAGTCTCCCTATCAATAAAGTTGACATGCAATGGCTTCAGGTGT TAGCTGAAGGTTGGGCGTCACCCTTGGAAGGGTTTATGTATGAGCGCGAA TATCTACAGACGCTTCATTTCAATTGTTTACAAGATTCAGATAATATCAA TCAATCAGTTCCCATTGTATTACCTGTCACTACTGAACTAAAAGAATCAC TGGAGAATAAAGGTAAGCTTTTGttttacaatgaagtgaatacagtcgct ctcatgttgtcttcgGACAACagaagtttgctcgctgtttttaatgattt ttcgaaatttcgacgtggaaaaaaagtcagttttttggaaataactttcg aactactttttcaaactttatgtatgatagctcaaaattcaagttagagc atcctttatacaataaaaaaagaatgaacaaaaaatgaaaatcctgaacc tcacaatatctcgacaaacctgtatacttttttttggtgcacccggtaca cGAAGCGAATGTGTCCAATAAACTTGAAACAAGGTTATGTTTCAGCTTTT GGTCTTTGCGCAAGCTGAGCCGAATGGTTTTACTAGACAACTTACTGTTT AAATGTTGTTTTCCTTCTAACAGGAGAAATCGCACTTGAATATGACGGTC GTCGTGTAGCCATCCTCGGTGAAACAGAGTTCTTCCCACATCGTAAAGAG GAGAGATGTTGTCGACAATTCGGTACACGAAGCGTGAAACAACCTcatat tgaaatgattttaGCTGCAGGTGATTGGTGTGTTGGTGGCAAATTACGTG TCTTAGGTAAGTTGATTGATTTGTGGTGATTTTTAACTGGTTCTTGAATT TTAGTCGAATATAATTACTAGGCTTTAAAACTTCTGTCGTAGTGACTCGG CGGAAATTATTTAGCCCATAATGATAAAATCAAAGAGCTACTGATGGGAA ATCGCTTTTATCGTTTTTAATTAGTGGGAACTTTGCACTATATACTGTCT TATTAGCTTCCCAAAATTACAATGCCCTCCCCAATTGGGATGAAATTTAA GTGACCTTTCTAAGGGGATCACATTTTTCTTACCATTGACAATCTTTTGA gccatttttccagtgggggtGTTTAGAACATGTGCTTTATAACCTCAATT GGTTGTTTATGGAGCagtctttcttttcttcttcttttgtaCGTTAAAGT AATATATATGAGAAATACAGAAAttttaatattgaaaaattttttatgtt ttttctttagGTAAAATTGAATGGAACGATGGTCTTGATGAATATCGATT GAAACCAAACCAACTTCGCAAGAAATTTGCTGAAATGAAGGCGGATGCTG TGTTCGCTTTCCAATTACGTAATCCTGTGCACAACGGACACGCCCTTTTG ATGCGAGACACCAAACGGAACTTGGTTGAACGTGGTTACAAAAAACCGGT CTTACTTTTACATCCTTTGGGTGGTTGGACTAAAAATGATGACGTACCTT TGCCAATTCGTATTAAGCAGCATTTGGCGGTCTTGAAAGAAGGTGTATTA GATCCAGAGTCTACTGTCTTAGGTAGGTGGCCTCTTATTGTCAGCCAACT GAGTTAAAGCTGCATGATtagatattttgatatttctccATCACAGCGTT TATATACCCAAAGAATTTTGAAGAAATCTCAAGAGCTTCTAATGATTTCA GTGGTGTggttatttgttttgtttttttcactcTAATGTGTAAAAAACTC CAAAACTCTGTTTCATCGTTAATGCATGTCTCAGAGGTCTTTTAACCAGA TTTCAATCTATTTAATCTTAACTTGTTACTTACCTGCTTACTTTCCCTTT TATCTATAtccttataaaaagcgtgtacataTACTTCATAGTCATAGTGT AATCTGTGATGTGATTAGTCTAAATTCGATCTTGGGAATTTACTCTGTAT GGTTTTCTGCTGCCCAGAATTAATGACTAGTTTATTAAATCCTCTTTTAA TTTCATATTTCAGCTATCTTTCCGTCTCCAATGATGTATGCTGGCCCAAC AGAAGTCCAATGGCATTGCAAAGCACGAATTGCCGCAGGAGCTACATTCT ACATTGTTGGTCGTGATCCAGCCGGTATGGGACATCCTGACCAACCTGGG GATCTGTACGATGCCACACACGGACGTAAGGTCCTCACCATGGCTCCTGG TCTCGTTCAGTTAGAGATTGTTCCTTTCAAAGTTGCTGCTTACAATAAAG TAAAACATCAAATGACATTTTTTGATCCAGAAAAGAAGGaagaatttgaa tttatttctgGTACTAAGATGAGAGCTTTTGCCAGGAATGGTGATACTCC ACCAGATGGCTTCATGGCACCTACCGCTTGGAAAGTGTTAGCCGATTATT ACCAATCAATCGTCAAGAATGATTAAATTTTGTTTACAATCAATTTCTTC Acttattttttacaatttcttgttcatgttttgtttttgtttttttcatt tttatccattttataaattttttcagTTTGATGGCTAGATCTCTCATTTG GGTAGATGACGTCAAAGATAGGGATGTGCAATACTTCAGTCAGATATATA TTACTGCTGAAGGTAATATTATCTGGACAAGGCTTTCTTNCTCCATCACA GCGTTTATATACCCAAAGAATTTTGAAGAAATCTCAAGAGCTTCTAATGA TTTCAGTGGTGTggttatttgttttgtttttttcactcTAATGTGTAAAA AACTCCAAAACTCTGTTTCATCGTTAATGCATGTCTCAGAGGTCTTTTAA CCAGATTTCAATCTATTTAATCTTAACTTGTTACTTACCTGCTTACTTTC CCTTTTATCTATAtccttataaaaagcgtgtacataTACTTCATAGTCAT AGTGTAATCTGTGATGTGATTAGTCTAAATTCGATCTTGGGAATTTACTC TGTATGGTTTTCTGCTGCCCAGAATTAATGACTAGTTTATTAAATCCTCT TTTAATTTCATATTTCAGCTATCTTTCCGTCTCCAATGATGTATGCTGGC CCAACAGAAGTCCAATGGCATTGCAAAGCACGAATTGCCGCAGGAGCTAC ATTCTACATTGTTGGTCGTGATCCAGCCGGTATGGGACATCCTGACCAAC CTGGGGATCTGTACGATGCCACACACGGACGTAAGGTCCTCACCATGGCT CCTGGTCTCGTTCAGTTAGAGATTGTTCCTTTCAAAGTTGCTGCTTACAA TAAAGTAAAACATCAAATGACATTTTTTGATCCAGAAAAGAAGGaagaat ttgaatttatttctgGTACTAAGATGAGAGCTTTTGCCAGAAATGGTGAT ACTCCACCAGATGGCTTCATGGCACCTACCGCTTGGAAAGTGTTAGCCGA TTATTACCAATCAATCGTCAAGAATGATTAAATTTTGTTTACAATCAATT TCTTCActtattttttacaatttcttgttcatgttttgtttttgtttttt tcatttttatcgtttttataaatttttcagtttgatgGCTAGATCTCTCA TTTGGGTAGATGACGTCAAAGATAGGGATGGGCAATACTTCAGTCAGATA TATATTACTGCTAAAGGTAATATTATCTGGACAAGGCTTTCTTTACGTTT AGAAATGAAATTGGTGTATCCTGATTTTGCCTGTTTTTGACTGGGAGTAT ACGGATTTTCAGAAATCCCCTAAAATCTTGCTTGGGATATTAACATCCTT gcaagcatttttcagtatcctaagcatctccgagccttttttcaaatttt tgtattcttattaaagaaataaaaacaaagacaattACTTCAAGATGGTG TCGGTATTTAGAGACCAATCCCCCCTTGCCTTTGATGGTCCAGCTATTAA GGTAAGATAAGGAAGAGCAAAGGTAACTCCATGCGCTCTACTCGAGGTAT GACCCGGTTTCGTCTCTTTTAGGGAACATTCTTTTTGCATTAGTTTGGTC TAACCTTCTCTTTTTATTTTGTACGTTTTTCATGGtaaaaaatttctatt tattGACTGTATTTCCAGTTATTTGTTTATGCTTAATTTTTTTATACCTC GATctatttcaaaaatgttgttaggaattttcaaatttttgtctcATTTA AAATACGtgttttttcattaatttatcATTCTAATATGTATACCCTGGAG ACAAtatcaaaaatgaattattaAGTGCAataaaatccaaatatattccA GTCAGTATTTTATTTATTCTGTACAGACATGATTTCCACAGGAAATTCGA ATTCTGAGTGGTAAAATTGCACTTTTTTAAGACTACGCTCATGAAACGTC TTGGGTTTGTTATTGTGATTGTTATAAGAAACGCCAACTTTCGGCTCAAG CTTTAAGTTGcctagcattctagctcattt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050514TCONS_00050514Clytia hemisphaericatranscript
TCONS_00050515TCONS_00050515Clytia hemisphaericatranscript
TCONS_00050516TCONS_00050516Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050515-proteinTCONS_00050515-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_179supercontigscaffold_179:251486..257015 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PAPSS2bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform b Homo Sapiens
PAPSS1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
108.15 96.81 77.09 69.49 35.1 29.24 145.23 165.73 116.37 198.06 50.67 61.05 37.97 29.11 55.79 69.99 157.46 97.18 24.73 47.93 53.46 53.81 72.54 76.69 45.47 45.58 77.44 39.26 40.55 36.03