XLOC_031951 (gene) - C. hemisphaerica

Overview
NameXLOC_031951
Unique NameXLOC_031951
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_172:45875..49297+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031951 ID=XLOC_031951|Name=XLOC_031951|organism=Clytia hemisphaerica|type=gene|length=3423bp|location=Sequence derived from alignment at scaffold_172:45875..49297+ (Clytia hemisphaerica)
GCCAAAACTTTCTTGACAAGGAAATATAAATCAGCATACAGAAGGTTTCA
GTTAACAAAACAACAACTGTGggaaaaaaaacagataaaggTAACACTTT
TTACTGGCAAGGATGTTGGTCAAAAGAACCcaatttgttttcaatttatt
ttgtttgtcgTTTGCTTCGTTTGAGAGACGTAAGTGTTGCATgtttcccg
ccaaatttaatttatttcacacATTCCTCAAATTCatgctatttcaagcc
ttaaaatagcGTTAAAACAGGTTtcttttgcttatttaataacgcttttg
gccaaaaatatcctacaaccgccaaattaaattcccgccaaaatttcttc
ctttaaggtaattttAACCACATTTGTTCAGNaggtttttttgcttattt
aataacgcttttggccaaaaatatcctacaaccgccaaattaaattcccg
ccaaaatttcttcctttaaggtaattttAACCACATTTGTTCAGACCATG
CAAAAAACAAGAACACATCTATAAAAGCAGGTTTTAGCTCAATTTTTGAT
GGTCACGACTTTTCAAGGGAAAACTTCAGCTTTGGCAAATTTAAACAATT
TTGCTCTAGGTTAGTCtcggtactcttaggttccaaataaacgggccccc
ccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNgctgtcaaagagaaggccccttattttgctctaaat
agcctgattttagcctatttttaccttatttttgggtttcagaagtacaa
tttccaacccacccggcaattaggtcccccccgtttattaaaatctataa
aattttccaacccccccgtttattcgaacccccccgtttatttggaacct
aagagtaatcgAGCAAAATACTAGCAAATACAAATAGCAGCAAgagtaga
aaaaaaaatctataaacacCCATTATTGGGCATGATTCGAACGAACAGAA
ACACCTCACCATGAGACCCACTCGATAGAAGTCTTTTAATTCTCTATGCC
AGTTTAtgtagaaatgaaaataaaaattctcgaaattcaatttgccacta
ctggcaaaaaacTGGATTTTTCAGtagaaacaagcaacatgctgaatgga
cctacctaatgattaacatcagatgaaaataagaaaaaagtgacaataat
tgtacaaaaattcagaatggaaaaataaagcttgtgtgttgaataatgta
aaatggtaaggaatttccccaaatacgaaaatcacttaaaccattcaggc
ccaaaaaaccttttaagctgtttttggcccaaatttgcccaaaaaaattt
ttcttaaaaatctggctccgtcacattttgggcattgccattttgcatca
ttgtgcaaaaaatcagtaaaaaattatgagtcaacattgagaaaagctat
attttcttatttggttaaagggaatttccccaaaatacgaaaatccgttt
tttaaggcgaataagaattttccgNttcagccattctttagagaatcttg
ccctccatctttgtacaaaaaatcagaaaaaagtaatgacaggattttgc
acaaagtccaaaaaaccctaattttaggtagtttttggcccaaattNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNtaatgagccaatcttgagaaaagctggtaacagacgg
acggacgaacggacatgggttaatttatagaacctccaccggggtacccg
gaggtaggtccaaaaattacgTTTTGAATATCATGAATCGGCAACGACAA
AGTATACTTAAAGCGCTAAACAATCAATCTGATTCTTCTTCAGATCAATG
TGAAATTTCTCCTGCGGAAGAAACGGTAATCCAAGGAGAAAATGTAACTT
CATCATTACACGAAGACGAACCTCTCCAAAGACAAAATGTGGGCAACTAC
TTTCCATCCTTTAAACTCAACAATGTAGACTACGCAGGAAAGAAACAGGT
CCTGTATGAAAACAACATACCGTCTATCCGTAAATGGAAAAATAGGCGAC
TAAACGGACGAAGAGGAAAAGGTATGAGGGGCCGGTGGAGAAATCAACAC
CGCAGAAAAGGACACAGAAATCGAAACAAAGGAAAAGGAAGGAAATGGCC
TCAAAGgtaatttaaaaagaattttcaatggCATGTGTATCTTCTTTGAG
GAAAGTCAGGGGTTTACTAACATTTTTGAAACTTGAAAGTTTTCGGGCTT
TTAGTTTTTTTGCAATCAGGAAAGAAAatgcttgtttttcttttgatatc
tATAACTTTTTTCATCCTTAGACCTAGGAAATGGCGTGCTCAGAACTGGC
GCGAAAGGGCGAGAGGAAAGAAAGGCAGAAGAAAGTGGAGAGGTGGAaag
aatttcaacaaaaattggaaTACAGAGGAAGGCTCAAAAGATCAGGACAA
GGAAATTGAAACAATGGAGGAGGAGCAGGGAGAAGAAGATGAAGAGGAAG
ATGACCAAGGGTATGAAGATGAGGAAGAGGATGAAGAGGATGATGTGGAC
CAGGAGGATAACGAGGAGGACGGTGAGGGTCATGATGATAGGGCTGATGT
AGAGGATAAGGACCATGATCAAACTAATGAAAAAAAGGTGAAAGATTGCA
AAGATTCTGATGCAAACTGTGGTGGATCACATAGTGCAAAACCTTCGCCA
AAGGTTGATTGTGAGAACATCGATGGAGGGATGCTTGGCCCTACTTCTTC
AATCATACCAGGATGCAACCAACCTACACCAATTCGAAGCACGCGTAGAC
CGATCACTGTATACCCTAGCAACTGGAGAACAAAAAGACCTACAAACAAT
GTTTGGCCTTATGGTCCTTCAACGACACAGAAACCAGCCACTACTTTACC
AAGGGTATGTCCTTGCGCCACTCCACCCGCTCAAAGACCACCTTGTCCTA
CGCTGAACTGTGTTCCATACACCATAGTCTCTCGTCTTAATGCAATTATA
CCAAATAAAGATACTTCAAGACAGCAAGAGAAGGTAGGCAGGTAAGAGAA
CTCGAGAGCTACAAGCAACAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050450TCONS_00050450Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050450-proteinTCONS_00050450-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_172supercontigscaffold_172:45875..49297 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.23	0.08	0.11	0.32	0.15	0.22	0.33	0.12	0.32	0.14	0.09	0.07	0.36	0.82	1.23	0.33	0.66	0	0	0.4	0.39	0.08	0.04	0.04	0.13	0.09	0.05	0.08	0