XLOC_031823 (gene) - C. hemisphaerica

Overview
NameXLOC_031823
Unique NameXLOC_031823
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_168:5766..11200-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031823 ID=XLOC_031823|Name=XLOC_031823|organism=Clytia hemisphaerica|type=gene|length=5435bp|location=Sequence derived from alignment at scaffold_168:5766..11200- (Clytia hemisphaerica)
GTTTTTTTGACAGACTATTTTTATTTGATTTGGTTATATGAAATTATAGG GAAATTATGATCAGAATATCTTTATTGATTAGAATGTCAATCCATTTCCA CAAATGAAGAAGATGAATTCGAAGAAACTTATTTTGAACAGTGTGACGAC ATAAATGACAGTCATGATACCGATGACGAAAAAGAAGGTAAGCGCTGTTA TGCCAAATTTGTATTTTAAAACAACTAGCAGAATTATGAGTAAATGAACT AAAAATAACTTTGTTGCAGATCTATCAAAGGCACTGGAGGAAGTAAAAAC TATGGTAGGCGAAAGACCAAAGCGGACTTGGGGAATGAGGGCAGAGAGAA ACGATCAAAGATGGAGAGAATCAAAAGAAGGTTTGTTAGAAGAGACGATC AGGAGAGAAGAGCAAGAGACATTTTGTTTTAAATGTGGTCAAAGAGAGGC TGAAATTCGATGTTATTCGTGTACTCATGCAATATTTCTTTGTACTGTTT GTGACACTGAAGTGCATAAATCCAAATCTTTTCATGATCGCCAATGGTTT AAGGAATTTTATAAACCTCTCACCCCAAAAGAACATATTGAAGATGGTCA AGTTGTCATCATTGGTAAGAAAGATTTAACAGTTATAAGTTATCATAACC AATCTTTTTCCATTTTTAAAGAATTTAGGTTTTTTATTAGTGACTCAACT TAAGTTTTTAGCTGTTTGTGTTGGGGCCGTAGTTAGAGTAAAATTTATTC TATGAAAGAATATTTTGGTATTATTTTACTATTTTATTATGTTTGGATAT TTAGAAAAACCATTGCTTCTTACAAGTAAATGTTCTTTCTGTGGCCACTT TTGCGAAAGTTGTGACGTACAAGTCTTGTCAACCGCACCCATTACAGTTA TCACAACCAAAGGTAGCTATATTTTTCAGTAGGAGTTGTTAAGAAATTAA AACCCTGATGAACATATTGTGTCCTTTTACTTTCCGTTATTTATATGTTA AATGCGGTTGTATGGAATATTCCATTAAGTTGTTATGACCGACCATTCTT ATCTCTCTTTGTAGGACGCTTTGATTTGAACAAATTTGAGCGAATTTGTT GTCATTGTACAGAGAAATCCAATCCCTTTCAAATACGAACGTTATTAAAG AATGGATATTGGCCTGTATCGCTGAACTACGCTTTAACAGTCATTCGCGA AGATTGCTTTTTACTTTGGGATCGCTTTTCAAAGAACATGCCTGGATCTT CTCTTGGAAGTTTTTTGAAATCTTTATCTGACATCTCCATACATAATGGC AGGGTTTGTTTTTCTTATATAATTTTTATTTATTTAGTTTAACTTTTGGA TCAAGAGTTGAACTTTAATTGTTGAAGTCATAACGTTAGCCACCCCTAGT ATATATGTATATAAATTTTTAAGGTGAGGGTGGGGGCTGGCTATTTTTTT CTGTAGCATTTAGAAATTTTCCATTGTTGTTTCACACTGCTCCATATTGT TTACTTTCATATCAGAATTACTAAATATTTGGAGGCTAATAAAAAACCTC AGATATTTGGGGGGGGGGCCTGAATCTTTTTTAGGGGACCTGATTTTTTT GCCTGGGGCCTAAACCCTATGGAAGTTCAATAAAGCTTCAGTTTGACTCA TTTGTATTTTAATAGTTCCGGGATTTTCCTATTAGGTTGGAACAATAAAC CAACCGATGTTTGCTCACGCTTTCAAAGAGTACCAACATTTGAAATTTGA TGTCGAACAGTTGTGTTCACTGTCTTGGTTTGAATGTCCTGGCTGTGGTG ATCAGCAGCATTCTTGCCACGTGGATGGAAATAATAAATTGTATCGATAC AAAACGTCTGGAAAGTCAGTATTAATTTCTTTTAAAGGTCGATCTTTAAA AAATTTTAAAGAATAATATCTCAGACAGCTGTCTTGTCTTTGTTTATGTT TATCTTATGATTGTCTTTTTAGTTATATCTAGTTATTATGTGAATAATCT ATATTCGATTTTCTGATTAAAGATAGTGGCAAATCTATGCAATAACTATA TTTTTCTTATTTTCATTTTTTAGACGTACTGCCAAACCTTATTATGGTGA CATTTTTATTGTTAAGAACGAAAAGGTCAATGATCATTTGGCAAAGCTGA ATTACAGTGTCCGTCAACCGAAAGTATGTATCATTTTCTTTTATTCTCTA CGTATTAGTTTACTTGTTGAGAAGATATGAAACCTTTTTCTGTTTTGAAA GAAAAATGTTTATTGCTTGTTCTTTTTCAACAATACAATCAAAAATGAAT TAGCAACAATTGCGAAATAATAAATCATAAGAAAAATATTCCTTGGATGC TGTTTGTATTTAATTTTTAGAATTCTGAACCTGTCAATTGCGGAGGCAAT ATATTAAAAGCTGCTCAGAATGTGTCCAGGAAAAAGGCGTCTCTGGATGA AACGGGGTTAGAGTATTGTGTGTGTCGACATGGTATTGCACAGAGCGGTG TCAATATGTTTAGGGGAGAAATCTTCGGCTATGCTCATTACTTGCAAAAA GATCACATGGTGTCTAAAAACGTTAAGTTTATATGGTATGATGTCATTTG CAAGTACTGGTCATGGTTGAAGTCAAACGACCCGTTCTTAGCTGAAGAAA TGAAACCTGCCCTGTCAGTCTTACATGGAAAAATGCACCAGATGTCTTGT CAGGTTGTCTTAAATTTTTACGTCTAATGTTCCTTTTTACATTTAACACT CACTGATTCTTTTTCTTCTTAACATTTTTCGCACTTTTCAAAGCTTTTAA TGTAACATCAATGATAACAGAATTTNGTCTTGTCAGGTTGTCTTAAATTT TTACGTCTAATGTTCCTTTTTACATTTAACACTGATTCGTTTTCTTCTTA ACATTTTTCGCACTTTTCAAAGCTTTTAATGTAACATCGATGATAACAGA ATTCGTAACTTTTAAAATGTGGTGTTAACGGTTTTTTCATGTATCTCGAT AGATTGGCTTTGGTGGTAGATGGACCAAGGGTGCTGCATTAACTACAGGA GAAGAAACTGAGCAAGTTAACAGCTACTTGTCAAGACTCACCAACACAAC AAAATACATGCTTCCTCAAAGTAAATTTCATAGACTAAAATTGGTACATT GATTGGTATACAAATTTATAACAGATTATAAAAGTGAATAAATGCATTTG AAATCTCTTTACCATAGACCGCGAGGATACTATCACTGAATTTGCCATGG AGTGGAATCAAAGAAAGGTGAAAAGATCATCCAAAAGTTTGATGAAAAAG TATACAAAGGTAATTTAGTTTGAAGGATTGATTCTCTGTGGAAGGTTTCT CATTTCTTCTTTTTCTTTTGCCACTTTTCTGTATAAAATTTTACAGGTAG AAAAAGAGCTGAAGAAACTTAAAAGCAAGAAANTTTCTTTTGCCACTTTT CTGTATAAAATTTTACAGGTAGAAAAAGAGCTGAAGAACCTTAAAAGCAA GAAACAAGACGATCCAACATTAATAGACGAATTGAAATGCGAATTGCTCA TTTATTCACAAACAAGTAAAGCTTATCGGTTTAATTTTTATTGTTAAGAA TCAACGTTTACAATTTGAGAAACCTTTTCATACTTTCTATAAGACTTTGT TCTCGTATGAATGTATCATTGTGTACTGAAGTCTCAAGATTAATGCTAAA TATTTCATCGCTTTCTATCGTAGATAAAATTAAAGAAGGCAAAGATAAAT TGATTGACGACATTGCGAAACTAAGATTCGAGATTGGAATGAGAAAGATG TCAATGGGTAAATTAGCAGGTAAAAAAGTACAAAATGCATGATTTTTTTT AAATGATCTGTTTATTTTCACTCATGAATTCTAATCTTAAGTCGACGTAT GCAATTACGCAATTATGCAATTTTAAATTTTTCACTGAAGATATTATAAA ATACCGTTCATGTTCAGGAAAAAGAAAATAATTTATATTTAAAAAACTTT AAAAGATCTAACTATTATTGATTATAGATTCAAGCAAGCAAAGAACTAAA CTTCGGAGAAAGAATGCCAAAGACAAAGTAAAGATTACTGGTTTGGAGAA CGAGCTCAAAGGTTTTTTTAATGGAGACGATTCTAGCTGGAACAAGTATA TTGAAGAGAGAGAACGCGAAATTAGTATGTTTTTAACAAGCATGACTCAT CTATCAATCAAGATCTGAATTCGATGATTTCTTCCATTTACCAAGGGGTT TTCGGAAAGCATCAAATAAAAATTTTTCGGAGATTTAATTTCAAGAAATG ACAAAAATGAAATAAAATATACATTTAGCATAATATAACTTAAATTTTTT AGGCTCGAGGAAAGAGAAGAAGCAAAAGGTTGAAGATGCAATGATTCTCA CCAGATACTTGGAGGAAAAGAAGCTTCTTGTAGAAGAGATGAAAAACATG CTGTGTCATTATCGGGAAAAGCTAATTTCATTAAAAAATGGTATGATATT TGTGTTCGTATTTATTAAAAATTCTTCAAGATATTAAGGGAAATATGTTT TGAATATTTTCATCAAGATAATCAAACAAACTTTGGCGCGTATTAATTTT GGGCGGACGAGGTTATTTATTATTTTTATGCACTACCTGACTAGTCATAA GATTTGATTCCCTTTCCATGATAAAGAAATGCATTTAATGCACCCTTGAG GTATTATTTTGACGCCCTTGATAATAGCTTCATTAGAACATTCCTGTTAT TATCGTCATTTAAATTGATAAAATAACAAGTACAAAAGCATTTTATTAAT GTCTTCTTTTCGTGGATTTGAGATCTCTGTGAAAAAAATAAGCAAAAATA CTATAATAAAATATTTTTAACCACTATTCTACCATAGGGGAACTGTTTGA CAAATTAAACGCAGAAAATGGATTCCAGCGTTCGGTAAATACCTTATTTA CATATTATTTGAATGTTAGATAATTTCCCATGAATTTAGAATATAATTCT TACAATAATTTATCTCATTATTTTTCACTGTCTCATTATGTTTTTCAGAG TGTTACAGAAAAAGGAATGGAGAGTTTGAGACAGAAAACTCTCTCGTTCT GCACACAACAATTATTTGACGCAGTTGATTTATTTGATAACATTATCACC GGTCAATCAGTGAATCTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA AGAAGAAGAAGAAGAAGAAGTAGAAGAACAAAAAGAAGAAGAAGAAGAAG AAGAAGATATTATATCAGACACTGAGTCTGAAGACAATCCAGACGAAGAT AAAGACTGAGTCGGCAGACAGACAGACTCTTATTTTGTATTTTGTACCGG GTGACCCACGAAAAAGTTCGGACCTTTCTCGGCGTCTTGAGGCCGAACAA ATGTCCCAAAGTGCTCGGAATTTTGGTATTTAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050237TCONS_00050237Clytia hemisphaericatranscript
TCONS_00050236TCONS_00050236Clytia hemisphaericatranscript
TCONS_00050235TCONS_00050235Clytia hemisphaericatranscript
TCONS_00050234TCONS_00050234Clytia hemisphaericatranscript
TCONS_00050233TCONS_00050233Clytia hemisphaericatranscript
TCONS_00050232TCONS_00050232Clytia hemisphaericatranscript
TCONS_00050231TCONS_00050231Clytia hemisphaericatranscript
TCONS_00050230TCONS_00050230Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050234-proteinTCONS_00050234-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_168supercontigscaffold_168:5766..11200 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.97 5.71 2.07 1.23 12.66 9.55 10.07 12.61 8.7 11.11 13.77 9.66 11.82 12.51 8.41 11.56 12.1 11.82 12.01 15.67 13.05 11.83 5.6 6.77 12.34 13.04 12.73 10.14 10.36 9.28