XLOC_031729 (gene) - C. hemisphaerica

Overview
NameXLOC_031729
Unique NameXLOC_031729
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:1508835..1518572-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031729 ID=XLOC_031729|Name=XLOC_031729|organism=Clytia hemisphaerica|type=gene|length=9738bp|location=Sequence derived from alignment at scaffold_167:1508835..1518572- (Clytia hemisphaerica)
CAGAAAGATAGCTTCATTTCTGAAGTCAATTTGGATCCGAAGAGCACGCT
CTTAGTAAATTTCAATATATTTTTTTGGAATTTTGTTATATTTTATTCAA
TTTATTCATTATTGTTCAAATCATCTCATCAATTCATCGATAGTTGGATC
TACCAAGATGATGGAACCTTCTGATCAGGCGGATTTAACCGCATCAAAGT
CATTCTCTAAAGAGGAAGTAGAGCCACGGCTCCACAACGAACAGACCGCA
ACTTCACTTAACCGCAATGGTTCAAACACAACCCAGGATCAAATGGGTGA
AATGGAAAAGGCTTTAAGCCAACACAATCAACTTTCTTTGAACCAAGAAG
AAGGAAACAAGGTACTTTGAACATTTTTTCTCACTTTTCAATAAAAGTTC
TCATAAAACACTGGCGGATGGCTAGGCAGCCTTTCTGAATCATTATACAA
TTATGATTTGACTCTAAGAGACGGATCTTCTAGGATTGTTTCTGCTTTCT
GAATGATTTGATGGCATTTATGTCGGGCTGATATTCAAATCAACCATTAA
CAGTCATTGTACGTTAGCAAACCTGCTTTAGATGTCTGTCTGATCTTTTG
ACCTCTTTTTCGCCTCTTAGTCCTTTTAAAGTGTAAGGTTTTTCAACCTT
CTTCCTATTACACCCTCCTCTTAGCCTCTATTTATAGTCTAATCTCAGCC
TGTATTCAGGAAAAAAGGTTGGCTTGAGTACAGTTTATTCTCCAACGTTT
CCAGTTTTAAATGTTTGATAGGTTAGTAGTAGCCTAATCAACTGTAGCCT
AAATTTTCCTTCACTTTAAGGGGATACTATTATTTACACGGGTCCAAAAG
CACGAAAAACTTTCAGAACTTTCAAATTAGATACTTACATCAAAGAGCTA
CAAAGTATAATCAAACTGTGTAAGTGGGATCCGTGAGAGTGACATTTTCT
AACATCGCAATCAAAAGTCTTTCGTACCCACGAAATAACTTTAAAGATTT
TCTGTTTGTTGACTTTCTCAAATGTCAAACACCGACTATTTCAATTTCGA
TTGATTCAAGTCTTTTCAAAAACAAAAACAAAACATTCGAATCTTGATCA
AAACATTCGAAAGCGCATTCGTCAATATGCAATGTCTTCTTTTTTTTTAA
TCGAACGCAAGAGAATATTCCACCTCCACGTGATGTCTTTTGACCAATGA
AATCACTAGAATCTTACTGATGCGGGATAATTAAATTTACTCTGCTTTTG
TCTCCTTTTTAGAGAGACTTTTATCGTCCGTTCCCACCAAACACTAACCT
TTTGCTCCTCCTCAGAATCGAAAATGTCATTAATTTAGTCACCTTGCCAG
TACGTCTCTCGGAAACTTCATTAAATAACTTGTAAGGTGTTTCAAAAAAA
TTTGATCACCTTTCCTTTATCATGAAGTAGCTGAAGTAGGTTACCAGCAT
GATANTTTTCCAAAAAAATTTGATCACCTTTCCTTTATCATGAAGTAGCT
GAAGTAGGTTACCAGCATGATACCCTAGCGTAATTAAACCCAATGCCCTA
TTTTGATATAATTACCCCTCCCATTTAATTCGGGTGCCTCTCTACCTATA
CATGCACCTACTTATTTGAGAAGTTCCTTACAATTAAGTTCAAATATATT
GGAAAATTTTGGGTAAAGTTTGGGCGAGAATTACGATTTCAGTACTTTTA
TAGGAGCTCATTAGGAGCTCATTGGCTTCTAGTCTATATTCTCAGTCTTC
TTTGAACAATTTTGTATCATCCTAAAGTCCAGGTTTCATGTTAAAACTCA
GAGTTAAAAATTTACATCTTTGCAGGAAATTTCCTTTTTTATCAAATATC
ATTATTATGACTTTGATTGCACTTTGATTTACTTTTCCAATTAAAGTACC
TCTAACATTGGCATATCATTGGACTAATGAAATCGTTCCAAATCCCTTTT
AAAGTTAGTGAGCTTATTTGAAATTCTACAGTATATATAATCTTTATTTT
TAAATTTCAGACATCCAATGTATCCTTATTGCAAGAGGATGACAGAACGC
CAACCGCTCAGCAGGTTTATGATATGGTTCATAGCGCAGACAACATTCAC
ATCTCATCAACCGACGGTAAGAAGGGGCGCTTGGTCAAACGCTCACTTAA
GAAGAAGGCCTCTACAGCAGGAGGGTCTGCGTCGGCGACAAGCACTTTAT
CAAAACCAACCGATTTGGCAAACTCCAACCAGTCTCCGGACTCTGCTGCT
TTAACTTGTTTATCTCAATCAAACGGAGAATCCGTAGACGCTTCAAATAA
TTGCAATGCTGAACGTACTTCTTCCGTGGATGATACTGTTAATGGACAGC
AAAAGAAGAAGGGAAACAGTGGACACAACAAAAAATCCTCACCGTCGAAT
AGTGTCGAAGAAATTAACAATGTAATTGAGAAGATATCTTCCATGGATTG
TAAAGAATGTGAACAAGCTTGTGGAAGTGAAAATCCTCAACCCAAAGGAA
ATATCTTATCAAAGATAGCGTTTTTTGAAGAGCGGCGCACAGTTGAATTG
CCAGCTGTTGACAGTGCATCACCAAGTGATAATACCATTGTTCCACAAGG
CCAACTAAAATCTCCAAACGCCATTAAAAGTCATTTCACTGAGACTCCAA
AGGATTCTCAAAAACAACTTCTTATTCAGTCAAATGTTCCAGAAGTATCC
CCTGCAGATACTATGAACAAACCGGAACAGCTCCTTCCAAGTTCTATGGA
CAAGGTTCCGGTAACAGTACCCCAAACCAACAAAAGTACTTGCGAGGTTT
CCCAAGACACACCAGTGCAACCACAGCTCAAAAAACCTAGTTACGCTGAT
ATGGCTATGAAACCTGCTGTAAAACCCATCCTTCCTCCAAAGAAAGTGTC
TGTAGAAACATCAAAAGATGTAAAACAAAGAACATCTAAGACGAATACGG
AAAACAAAGCCTCCAGAAAAGGCTCATCAAAAGAGTCCAAGCTGGGTAGA
ACTAGATCTGACGCCCGCAAGAAGAGCTCTAATGAGTTTAAGACGTCGAG
TGAAGGCGTTTCCAAAAAGGCGGCGTATTTCAATGCTAAATTTGACGCCC
GTACCAAGAACATGACAGGAGGTCGGTCAAATAATAATAAACGTGTTCCC
GTCAAACCATTCAAAAATGTTCAACATGAGAATATTGGGAAAGGATCTGA
CAAAAAACATCTGCCCAAACGTTCTTCCACAAAATGCGATGGCAAAAATA
TCATCGCCGAGACGGTCAATAATGCGAAAGCAGCTAATTTTTCAAAAAAC
AATCCAGCCAAGAAGAAGTCAATTAATAGTGACAACAACACTAACACCAC
CGCAGTGAAAATAGAACACCCTGCAATAAAACAGGCTGTGAAGCCAGAAG
CCGAACTCCAAAAACCGAACAGTGAAGTGAAGGGTGATCCACAACCTACA
CCTCAACAGTCTACCTTGGAGAAGCGCGGTCCAAGCTACGCCGATATGGC
TAAAAAACCAGCTGTCATTAAACCAGCACCGCCTACTACGAAAAAAGTGG
ATGAACCTTCAAAAGATCTTGTGAAAAAGGGATCTCAGAAGAAAACAACT
AAAACCTCTAAGAAAGTATCATATAAAGATGTTAGATTGGTCAAGAATCC
ATCCAAAACAACAAAAGAAGGTTCCCGTGTATTTAGCAAAAACACATCAG
ACAAGCATCTACCTGCTAACAGTGTTGGTGCCAAGGCTGCATTTTTTGAT
GGGAAGAACAAGACAAACGGCCAATATAAACAACAAAAAATATCAACAAA
AAATGGACGACCTCAAAACTATCCAAAAATCGATGCGGCTTCTTCAACTA
AGCAACAAAGAAAAAGAGGCAATCAGGCTTCAACGAGTGATTTGCCAAAA
AAGGTAAAATTGAGTGATGGAAAGTTTGCTATAAAATCAAAGGAGACAGA
AAATTTTCAACGTTCAAGGACTAATGGAAAAGTCACATGTGTGAAAATAG
ATAGTGACAACCAGCTCCCGAGTGAACAAGAACTCTTTTCTTCATGTTCA
ACTCGTGAAGTTATTGTCAAACGAGAAGTATTTGAATCCACACAACAAGT
TGACCAACAACCTAAAAATATCGTACAAACAAACAAGGTTACTGAATACC
AAGATGCTTCACCTGAGGCCCCAAACAAGGTTACTGACCACCAAGAAGCT
TCACCCGAAGCACCAAACAAGGTTATTGACCACCAAGATGCTTCACCTGA
GGCACCGAACAAGGTTACTGACCACCAAGATGCTTCACCTGAGGCACCGA
ACAAGGTTACTGACCGCCAAGATGCTTCACCTGAGGCACCGAACAAGGTT
CCTGACCACCAAGATGCTACAACTGAGGCACCGAACAAGGTGACTGACCA
CCGTGTAGCTACAACCGCGAAAGCTAACAAGGTTACTGACTACCAAGATG
CTACAACTGAGGCTACAACTGAGGCGCACAACAAGGTTGCACAGTCCCAA
GATGCTACAACCGAGGTACTGAACAAGGGTACTGACCACCAAGATGCTTC
ACCTGAGGCACCGAACAAGGTTCCTGACCACCAAGATGCTACAACTGAGG
CACCGAACAAGGTGACTGACCACCGTGTAGCTACAACCGCGAAAGCTAAC
AAGGTTACTGACTACCAAGATGCTACAACTGAGGCTACAACTGAGGCGCA
CAACAAGGTTGCACAGTCCCAAGATGCTACAACCGAGGTACTGAACAAGG
GTACTGACCACCAAGATGCTTCACCTGAGGCACCGAACAAGGTTCCTGAC
CACCAAGATGCTACAACTGAGGCACCGAACAAGGTGACTGACCACCGTGT
AGCTACAACCGCGAAAGCTAACAAGGTTACTGACTACCAAGATGCTACAA
CTGAGGCTACAACTGAGGCGCACAACAAGGTTGCACAGTCCCAAGATGCT
ACAACCGAGGTACTGAACAAGGGTACTGACCACCAAGATGCTTCACCTGA
GGCACCGAACAAGGTTCCTGACCACCAAGATGCTACAACTGAGGCACCGA
ACAAGGTGACTGACCACCGTGTAGCTACAACCGCGAAAGCTAACAAGGTT
ACTGACTACCAAGATGCTACAACTGAGGCTACAACTGAGGCGCACAACAA
GGTTGCACAGTCCCAAGATGCTACAACCGAGGTACTGAACAAGGGTACTG
ACCACCAAGATGCTTCACCTGAGGCACCGAACAAGGTTCCTGACCACCAA
GATGCTACAACTGAGGCACCGAACAAGGTGACTGACCACCGTGTAGCTAC
AACCGCGAAAGCTAACAAGGTTACTGACTACCAAGATGCTACAACTGAGG
CTACAACTGAGGCGCACAACAAGGTTGCACAGTCCCAAGATGCTACAACC
GAGGTACTGAACAAGGGTACTGACCACCAAGATGCTTCACCTGAGGCACC
GAACAAGGTTACTGACCCCCAAGATGCTACAACCGAGGCACCTAACAAGG
TTACTGACTACCAAGATGCTACAACTGAGGCTACAACTGAGGCACCGAAC
AAGGTTACTGACCACCAAGATGCTACAACCGAGGTACTGAACAAGGCTAC
TGACCACCAAAATGCTACAACCGAGGCACCGAACAAAGTTATTGACCACA
AAGAAGTTTCAACCGAAGCACCGAACAAGGTTACTGACCACCAAGAAGCT
TCACCCGAGGAACCAAGCAAGATTACTGACCACCAAGATGCTACAACTGA
GGCTACAACTGAGGCTACAACTGAGGCACCGAACAAGGTGACTGACTACC
AAGATGCTACAACTGAGGCACCGAACAAGGTTACTGACCACAAAGAAGCT
TCATCAGAGGCACCAAATAAGGCTACTGACAACCAAGATGCTACAACCGA
GGCACCGAACAAGGTTACTGACCACCAAGATGCTTCAACCGAGGCACCGA
ACAAGGTGACTGACTACCAAGATGCTACAACTGAGGCACCGAACAAGGTT
ACTGACCACCACGAACCTTCAACCGAGGCACCGAACAAGGTTACTGACCA
CCAAGAAGCTGCAACCGAGGCACTGAGCAAGGTTACTGACTACCTAGATG
TTACAACCGAGGCACCGAACAAGGTTACTGACCACCAAGAAGCTACAACC
GAGGCACCGAATAAGGTTATGGACCACCAAGAAGCTTCACCCGAAGCACC
AAGCAAGGTGACTGACCACCAAGATGCTTCAACTGAGGCACCGAACAAGG
TTACTGACCACCAAGATGCTTCAACCGAGGCACCGAACAAGGTGACTGAC
TACCAAGATGCTACAACTGAGGCACCGAACAAGGTCACTGACCACAAAGA
AGCTTCAACCGAAGCACCGAACAAGGTTACTGACCACCAAGAAGCTACAA
CCGAGGAACCAAACAAGGTTACTGACCACCAAGATGCTTCAACCGAGGCA
CCAAACAAGGCTACTGACCACCAAGAAGCTTCACCCGAAGCAACAAGCAA
GGGAACTGACCACCAAGAAGAGGCACCAAACAAGGGAACGGAACAACAAG
AAGTGTTGGTCGAGATGCCAAATAACGACACTAAACAAGGAGAAATTGTT
GTCAAAGTGCAGGTCAACGATGCCGATAGTCAAAAAATATTGATGGATGG
ACCCAACAAAGATATCACAATCCCAAGAAAAACCACCTCGATGGTAACAA
TAACCCAACAAAAACGCCATACCACTTTTGTCAGACGAAGCCAAAGTACA
CCCGATATGTTAGATTTTTTTCTTATGAATACTCCTCAAGATAAAAGTCC
AACGGTTAAAGAATTATTGATCCGATTGGAAAAAGACGCTCAAAAGACGT
TTAAACGACGATCAAAAGAAGTTTCAGAGGAGAGTAAGGATAAGATGGAA
TTACTAGTCTCTTCCAGTGTAGCTACGATGGTGGCGTCTGAAGATGAAAT
AAAAAGAAAATTAACAGATGCGGTGAAAGCCAAGAAACGTCTTACGACCG
ACATATTGCTTTTGAAAGAGGTGAGCGACTTCTTGATCTTTCTTTAGAAA
CGGTTAGACCCATTAGGGAATAACATCACCAATAATTATTAAATACAAAA
GCTTCGTATTTTGATGAGACAGAATGAATCGATGACGTTAATAAGTAAAG
AATAGTACGCTATGCTATGAACATTTGGCTCCGACCGCCCATTATTTAAG
TACATGTTTTTTTTTTATAGGCATTGCACTTATAATAAGCATATCTAGGC
TCAGATATGGGGAAAAATTAAGCATATGGCAAGCATTTTTAGATTTAAGC
TTTATTAAGCTTTCGACCTAAGCATCTCTGAGCCTGTTTTCAGATTTTTG
TATGCTTATAAAAAAAAAACATGTACCGGGTGCACCAAAAAAAAGTATAC
AATTTTGTCGAGATAATGTGAGCTTCAGGATTTAAATTTTTTGTTCATTC
TTCTTTTATTGTATATAGAGGATGCTCTAACTTGAATTTTCAGCCATCAT
ACATTAAATTTGAAAAAGGAGTTCGAAAGTTATTTCCAAAAAACTGACTT
TTTTTCCATGTCGAAATTTCAAAAAATCATTAAAAACAGCGAGCAAACTT
TTTTCTTCACACTTACCTTCTTTACACATAAAATACCAAAAAAATACAAC
TGTGCTCATCAAAACAAGTTGCAGAATATGGTAAAACAAGCTATTCCCAC
GTGGGATAATAGTTATTTTTGGAAAGGCTGAAATCTTTTTTTGGAAATCT
CTAAGAGAGGTTTTGATGTTATGTGTGCGCTATGTTAGAAAACCTTTGAA
AAAATAGATCACCATTCCTCGACTAGTTGCTCAAAGAACTTGGGTCTGCA
TTGAGTTTGCTGGTGTTGGAAATGTTCATGACATGCAAATAAGATGGAGA
AACTGTTGGCAAAATATAAGATAGGAGAAAAAGGAATAAAAAAACAATGA
AATTGTGTTTTTGTCATTTCGTCTTATTTATAGCGTGATTGCTGTTTTTA
ATGATTTTTTGAAATTTCGACATGGAAAAAAGTTAGTTTTTTGGAAATAA
CTTTCGAACTCCTTTTTCAAATTTAATGTATGATGGCTCAAAATTCAAGT
TAGAGCATCCTCTATACAATAAAAGAAGAATGAACAAAAAGTTTAAATCC
GGAAGCTCACATTATCTCGACAAAGTTGTATACTTTTTTTCGGTGCACCC
GGTATACTGATCCAAATACAGTTGGCTAATTTTGGAATGCAGAGTGCTTT
TCTTGTCAAACAATCGCTCAGTCTAGGAGAAATTATCCTTTAGAATAGGT
AACAAAGAAACTTGACCAGGGTTATACGTTAATCAAGTGAGCCCCTTCTT
TTCATAAAACTTCTAGTCCCACGTTCTGAATATTTGTCTTAAATGTCATA
TAAATATTACCAATCCCATTCCCCATTTATGGTTCTGACCTTCATGATAA
ATCTATTCTTTGATATTCTTTTCTGCAGCAACTTTCACAAGAGAAAAGAA
AAACGATGAAGAACATCAAGGAGAACGTGATAATGGCCATCCGAAATAAA
TTACATATGAAAGGTAAATCCAAAAGTGCACTCCAAATGGAAGAAAAACA
ACAAAAGATTAGAACATTGGAGAAAGAATTGCTGGATAAGATTTCCATAC
TTAAGTATATGGGAGTTGATCATGAACACGTCCAGAATGAACATAAAGTG
ATTGCCAAGGCTGACAGATGTACGGCACGGAGTACTGTGAATAACAATGG
TCTTCCTAAGGCAGGTAAAAAGGATAGCGCACCAGGCAAATCAAAGGTTC
ATACTGGATTGGGAACACCTCCCCGTGATAATGTTATACAGAACAAGTGC
AAAGGCCGCAGACCGATGAAATCGCTTTCCGAACCATGGGTTCAATCAGA
GCCCTTGGTGCTTGCGGAACCATTGCCACCGCCAAAGGTTGACGAAGTCA
ATGCAACGCCTGTACATTTGAAAAAACGAATTGTTTGTGAGTTTAGCGAG
TCACTTGAAGAAAGTGTTGAGTTGACAAGCGAAGTTATGCAGGGCCATTG
GGTACAAAATAGCCCAGACAAGGTAACTTGTGATTCATTTCTTTGAACAA
CCTTTAGATGCTATTAAGAATAGGTTTAGGACGGTGTGTATTGTTCACAT
ACAATTGTTTTTTTTAAACAACAGTGGTCAAACCAAGGTTTTCGTCTAAG
ACAGAAAATGGATTTTACACATCAAATTAGCATATATATTCTTGAGCTTT
TAGGGAATTAGAAAGAATTTCAAGCAGGGATAGCCTCTTTGTATCCACTA
AAGCACTTTTACTAATGAAACAAAACTCACTTTGATTTATTGATCACTTT
TTGAGATTCAAAACTAAATAAATCATTCTTTTTATTTTTCCTAGGACATG
AACCGTATGCGAAAAATGAATGCTGAGATATCAGAGATAAATTGTCGATA
TATCAAGTTGAGAAGGAACTTTGAAGCTGTATCGAACTGCCTTGAAGAAA
CCAAGGTTAAAAACCAACGACTAAAATCTAAATACGAGACCGCTTATTCG
GAGCTTCAAGAGCGTGACGCGGAAAGAGCTGAGAAAAAGAAACGCAGCCT
CGGCCGACGATTCCGAAAAATTTTCGGCTGCGCCTCCGCACGAAGCGACG
CCGCTCATAGTAGCGATTTAGACGATATGTATGTACAATCTTCATCACAA
CAAGACGCAGAAGATATGTGCACTCAATCTTCGTTGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050119TCONS_00050119Clytia hemisphaericatranscript
TCONS_00050118TCONS_00050118Clytia hemisphaericatranscript
TCONS_00050117TCONS_00050117Clytia hemisphaericatranscript
TCONS_00050116TCONS_00050116Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050116-proteinTCONS_00050116-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:1508835..1518572 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.16	0.43	0.44	0.02	0.01	0	0	0	0	0.04	0	0	0	0	0	0	0	0	0	0.01	0	0.02	0.01	0.35	0.62	0	0	0	0